Scomber japonicus (chub mackerel): 128357794
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Entry
128357794 CDS
T09718
Symbol
gpc6a
Name
(RefSeq) glypican-6a
KO
K08112
glypican 6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sjo00535
]
128357794 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
128357794 (gpc6a)
Proteoglycans [BR:
sjo00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
128357794 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
Others
128357794 (gpc6a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Put_Phosphatase
Serglycin
Motif
Other DBs
NCBI-GeneID:
128357794
NCBI-ProteinID:
XP_053174147
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Position
1:25887133..26036040
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AA seq
568 aa
AA seq
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MCAMWRLQVALCTLSVLSLSFGGESKARSCSEVRQAYNAKGFSLVNVPHQEISGEHLRVC
PQGYTCCTSEMEDKLNQQSKLEFENLVEDSSHNMRTTFVLRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLLNSQY
HFTDDYLECVSKYTDQLKPFGDIPKKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
VPACVRALTKMLYCPYCRGMPGLKPCHNYCHNVMRGCLANQADLDAEWNFFIDAMLQVAD
RLEGPVNIESVIEPIDIKISEAIMTMQDNSMQVSAKVFQGCGQPKPSGIGRSTRGISDVF
SARFRPYTPEERPTTAAGTSLDRLRVVWRTMQQSVIEIKEKLKESKRFWSNLPDDICAKD
KLSESDEEQCWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMTN
KLKNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCTTEFVFVGTDAPVVGADRSDERAAAAG
KSLFCRPSLLLVMAALTLPLWALQTRWR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgatgtggagactgcaagtcgccttatgtactctgtcggtgctgtccctgtca
tttggtggtgaaagcaaagcgcggagctgcagcgaggttagacaagcatataacgctaaa
ggattcagccttgtcaatgtacctcatcaggaaatatcaggtgagcacctacgtgtctgt
cctcagggatacacctgctgcacatccgagatggaggacaaactcaaccagcagagcaaa
ctggagtttgagaacttggttgaggatagcagccacaatatgaggacgacatttgtcttg
aggcataaaaagtttgacgagtttttcttggagctgctggacaactctgagaagtctctc
aacagcatgttcacacggacgtacgggaagctgtatatgcagaactcagaggtttttcag
gacctgttcactgagcttaagcgctactacacagggggcaatgtcaatctggaggagatg
ctgaatgacttctgggccaggctgctggagcgcatgttccagttactcaactcccagtac
cacttcacagacgactacctggagtgtgtcagtaaatacacagatcagctaaagcccttt
ggagacatacccaagaaactgaaggcccaggtcacaagggctttcattgctgcacggaca
tttgtccaggggctaatggtgggtcgagaagtcgccaacagggttgccaaggtgaatgta
gtaccagcatgtgtcagagccttgaccaagatgctgtactgtccatactgccgcggcatg
cctgggctgaaaccctgtcacaactactgtcacaacgttatgaggggctgtctagcaaac
caggccgacctggatgctgaatggaacttcttcattgatgctatgttgcaggtggctgac
agactggagggacccgtcaacattgaatcagttatcgagccaatagacatcaagatctca
gaagctatcatgaccatgcaggacaacagcatgcaagtgtcagccaaggtttttcaaggg
tgtggccaaccaaaaccttcaggaataggcagatctacacgtggcatatcagatgtgttc
agtgctcgtttcagaccctacacccctgaagaaaggccaaccacagcagctgggacgagc
ctggatagactgagggttgtctggaggacaatgcaacaaagtgtgattgagatcaaagag
aagctgaaggagtccaagaggttctggtccaacctgccagatgacatttgtgccaaggac
aagctctcagagtcggatgaggaacagtgctggaacagccacacgaagggcagatatttc
cctgaagtggtgaaggagggtctaactaaccaggtgaacaacccagaggtggatgtggat
atcaccaggcccgacacactgattcgacagcaaatcatggctctgcgtgtcatgactaac
aagctgaagaatgcatacaatgggaatgacatatattttcaggactccagtgatgaaggc
agtagctctggcagcggcagtggctgctctgatggctgcacaacagagtttgtttttgtt
ggaacagacgctcctgtggtcggcgctgacagaagcgatgaacgtgcagcggcagcaggc
aaatcactcttctgcagaccgtccctactgctggtgatggctgccctaacactcccactc
tgggcgttgcaaactagatggagataa
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