KEGG   Scomber japonicus (chub mackerel): 128357823
Entry
128357823         CDS       T09718                                 
Name
(RefSeq) tubulin alpha-1B chain-like
  KO
K07374  tubulin alpha
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04210  Apoptosis
sjo04530  Tight junction
sjo04540  Gap junction
sjo04814  Motor proteins
sjo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128357823
  09143 Cell growth and death
   04210 Apoptosis
    128357823
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128357823
   04540 Gap junction
    128357823
  09142 Cell motility
   04814 Motor proteins
    128357823
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128357823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128357823
   03036 Chromosome and associated proteins [BR:sjo03036]
    128357823
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sjo04812]
    128357823
   04147 Exosome [BR:sjo04147]
    128357823
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128357823
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     128357823
Cytoskeleton proteins [BR:sjo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    128357823
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128357823
  Exosomal proteins of other body fluids (saliva and urine)
   128357823
  Exosomal proteins of colorectal cancer cells
   128357823
SSDB
Motif
Pfam: Tubulin_C Tubulin Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 128357823
NCBI-ProteinID: XP_053174184
LinkDB
Position
4:complement(24344692..24346228)
AA seq 416 aa
MPSDKAIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI
KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgcccagtgacaaagccatcggaggaggagacgattctttcaacaccttcttcagtgag
actggcgccgggaagcacgtccccagggctgtttttgttgatctggagcctactgtcatc
gacgaggtacgcactgggacctaccgccagctgttccaccctgagcagctgatcactggt
aaggaggatgctgccaacaactacgcccgtggacactacaccatcggcaaagagatcatt
gacctggtgctggacaggatccgcaaactggctgaccagtgcactggccttcagggtttc
ctggtgttccacagcttcggaggtggcaccggctctggtttcacctccctgctgatggag
cgcctgtctgtcgactacggcaagaaatccaagctggagttctccatctacccagctccc
caggtgtccactgctgtggtggagccctacaactccatcctgaccacccacaccaccctg
gagcactctgactgtgccttcatggtagacaatgaggccatctacgatatctgccgtagg
aacctcgatatcgagcgtcctacctacaccaatctgaacaggttgatcagtcagattgtg
tcctccatcactgcttcccttcgtttcgatggtgccctcaatgttgatctgacagagttc
cagaccaacttggtgccatatccccgtatccacttccctctggccacctacgcccccgtc
atctcagctgagaaggcgtaccacgagcagctctcagtggctgagatcacaaacgcctgt
ttcgagccagccaatcagatggtgaaatgcgaccctcgccacggcaagtacatggcttgc
tgccttctgtaccgtggtgatgtggtgcccaaagatgtgaacgctgccattgccaccatc
aaaaccaagcgctccatccagtttgtggactggtgtcccactggtttcaaggttggcatc
aactaccagcctcccactgtggttcctggtggagatctggccaaggtccagagggctgtg
tgcatgctgagcaacaccactgctattgcagaggcctgggctcggcttgaccacaagttt
gacctgatgtacgctaagcgtgcctttgttcactggtatgtgggtgagggtatggaggag
ggagagttctctgaggccagggaggacatggcagctctagagaaggattatgaggaggtg
ggagtcgattctattgagggtgagggagaggaggaaggagaagaatattaa

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