Scomber japonicus (chub mackerel): 128357831
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Entry
128357831 CDS
T09718
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04217
Necroptosis
sjo04622
RIG-I-like receptor signaling pathway
sjo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128357831 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128357831 (cylda)
04625 C-type lectin receptor signaling pathway
128357831 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128357831 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128357831 (cylda)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128357831 (cylda)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C67
128357831 (cylda)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128357831 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
128357831
NCBI-ProteinID:
XP_053174196
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All DBs
Position
1:11791065..11816017
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AA seq
917 aa
AA seq
DB search
MSSALWSQEKPGGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKIRLERVRD
IDCGSKVRVQLRSGDDSLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDDNLGKLEVDHVNLVEEDQDYPPLEINSRVLVQTR
EGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVFDGKLLCNFASLEHTRLVPICD
VMPEYSMQEQRLQKHSFAPRGTNSDKSSSGQSKPKSKVGEDPAKSLTDTPPDFNQSSPPS
RAPPSGSLSSDNKFHSLPFSLNRKTGPIDSMSHGPLSLSVQSVMGEQPEPPSPAAPPSPR
PPTPPRGQPGLEVGSLVEVKENPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFK
GTRYFTCPPKKALFVKLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRT
ENDGLDVMVGKKKGIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQEL
LRTEIVNPLRIHGYVCATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPL
LKLRSAGQKVQDCYFYQIFMDKKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRF
GKDFKMFNKIFPSLELDITDLLEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEK
CNTQVHLHPRRKTHRHGKLSVPKELQEGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYG
SADSAWLFFDSMADRDGGQNGFNIPQVSPCPEVEAYLKMTPEELHALDPKSIQGQARRLL
CDAYMCMYQSPTMSLYK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccggtgggggcttcagggaggactggcgc
ttctacatggtggtgaaggagtgtacggtggagaagcctccccagaagaccctgaggatc
ccccgaggaagcctcggccaggcctgccaggagcgcaacagcttggggcgcacactcccc
ccttgcaagggcaagaaaagtctccgtattctggaccagaccaatgtggtgctgagcctg
gatgagcgggacgtcctggagctggacgagaaactggctgagctgctgtttcctattacc
aactgtgaggagcgatatgccctgctctgtaacaagattcgactagagcgcgtccgtgat
attgactgtggttctaaggtgcgtgtccagctgcgctcaggagatgactctctgcctggt
gtggtccgctttaagggctcgctgctccctgacagagccctctctggaatctggtttgga
gttgagctgctggaggagggccggggccagggcttcacggagggctcctaccagggccgc
caacttttccgctgtgaggatgagtgcggcgtgtttgtggcactggacaaacttgaactc
tgggaagatgatgatgacgacaacctgggcaagctggaggtggaccacgttaatttggtg
gaagaggaccaggactaccctccactggagatcaactctagggtcctagtgcagaccagg
gagggaccagagagaggcaccatcattttttgtgacttgctgccaggcaatgagagcctg
ggttactacgtgggagttgacatggacaatcctatcggggactgggatggtgtgtttgac
gggaagctgctgtgtaattttgccagtttggagcacactcgactcgtccccatctgtgac
gtaatgccagaatattccatgcaggaacaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgacaagtcgtcctctggccaaagcaaaccaaagagcaaagttggggag
gaccctgccaagtcacttactgacacccccccagacttcaaccagtcctcaccgccctcc
agggccccaccctctggctcgttgtccagtgacaacaagttccactctctgcccttcagc
ttgaaccggaagactgggcccattgacagcatgagtcatgggcctctctccctgtctgtg
cagtcagtgatgggagagcagcccgagcccccatcacctgctgcacctccctcgccgcgg
ccgccgacacctccccgaggtcagccaggtctagaggtgggctctttagtggaggtgaaa
gagaatcccccactgtgtggtgtcatccgttgggtgggtctgcctcctggcctgctggag
cctttggctgggctggagctggaagaagagtgtcctggttgcactgacggcaccttcaaa
ggtacgcggtacttcacctgccctcccaaaaaagccctgtttgtgaagctcaagtgctgc
cggcccgactcccgcttcccatccctgcaccactcctccaaccctatagagcgttgtaac
tccattgcatttgggggatacctgagtgaggtagtacatgagaacactcctccccgaacg
gaaaatgatggtctggatgtcatggtgggaaaaaagaaaggcatccagggccactacaac
tcctgctaccttgattcaaccctcttctgtcttttctccttcagctcagtactggacacg
gttctgctgagaccacgctcaaagactgacgtggagtattacagagagacccaagagcta
ttacgcacagagatagtcaatcccttgcgcatacacgggtatgtgtgtgccactaaagtg
atgaagctaagaaggatcctggagaaagtagaagctgcctctgggtttacttctgaagaa
aaagatcctgaggagttcctcaatatccttttccatcacatactgagggtggacccattg
ctcaaactaaggtcagcaggacagaaggtccaggactgttacttttaccagattttcatg
gacaagaaagacaaggttggagttcccaccatccagcagctcctggagtggtccttcatc
aacagtgacttaaagtttgcagaggctccctcctgccttatcatccagatgccccgcttt
ggaaaggacttcaaaatgttcaacaagattttcccctcgctagagttagacatcacagac
ctccttgaagacactcccagggaatgtcgaatctgtggtggcctggctctttacgagtgc
cgagactgttatgaggacggggatatcaccgctggcaagatcaaacagttctgtgaaaag
tgcaatacacaggttcacctccacccaagacgaaaaacccatcggcacggcaaactgtcc
gtccccaaggagctacaagaaggtacggggcggcagggcagttttccccgccagaggatg
gagctgtttgctgtgctgtgcatcgagaccagtcactacgtggccttcgtcaagtacggc
agcgcagattctgcctggctcttctttgacagcatggctgaccgtgatggagggcagaac
ggtttcaacatcccccaggtgtctccctgtccagaagtggaggcctacctgaaaatgacc
ccagaggagctacacgccctagaccccaagagcatccaaggccaggcccgacggctgctg
tgcgacgcctacatgtgcatgtaccagagccctaccatgagcctctacaagtag
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