Scomber japonicus (chub mackerel): 128357900
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Entry
128357900 CDS
T09718
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128357900 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128357900 (hnrnpa1b)
03041 Spliceosome [BR:
sjo03041
]
128357900 (hnrnpa1b)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128357900 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
128357900 (hnrnpa1b)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
hnRNP proteins
128357900 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
RRM_3
Motif
Other DBs
NCBI-GeneID:
128357900
NCBI-ProteinID:
XP_053174281
LinkDB
All DBs
Position
4:18153303..18157328
Genome browser
AA seq
355 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVDEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTDESHL
RDYFEQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TRQEMQTAGMGMRGRSSGGRPYDYDRGFSQGGRGRYGDGPYNCNGGDGGGGGGGCGGDDF
AGYGGGPGGPGGYNNGGNRGYNQGYNQGGGGGGGGGGYGGNGYDSNGYGNCGGGGGSGGG
GGGGSNYNNMGHYDPQASNFGPMKNNFGGGGGGGRNFGGYGGGSNNGGYGRPGRF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagatgtcccacgcgagccggagcagctccgcaagctgttcattgggggtttg
agctttgagaccacagatgaaagcctgcgggctcactttgagcaatggggtagccttaca
gactgtgtggtcatgagggatcccaacagcaaaagatccaggggctttggctttgtgaca
tactcctcagtagatgaggttgatgctgccatgtctgcccgtccccataaggttgatgga
agagtggtggagcctaagcgtgctgtctccagagaggactcaaaccggccaggtgcccat
gtaacagtgaaaaagatctttgttgggggcatcaaggaagatacagatgagtcacacctg
cgggattactttgagcagtttggcaaaatagaggtcattgatattatgactgatcgtaat
actggcaagaagaggggctttgctttcgtaacctttgatgaccacgattcagttgacagg
attgtcattcagaaataccacacaatcaactctcacaactgtgaagtgaggaaggctctc
acaaggcaggaaatgcagactgcaggaatgggaatgagaggccgtagcagtggtggaagg
ccctatgactacgacagaggcttcagtcaaggtggcaggggtagatatggagatggtcct
tacaattgcaatggaggagatggtggcggcggcggcggtggttgcggtggggatgatttt
gcaggttatggaggtggccctggtggccctggtggctataacaatggcggtaaccgaggt
tataaccagggatacaatcagggtggaggtggaggtggaggcggcggcggctatggagga
aacggttatgatagcaacggttatggaaactgtggtggtggcggaggcagcggcggtggt
ggtggcggcggcagtaactacaacaatatgggccactacgacccccaggcctctaacttt
ggcccaatgaagaacaactttggaggtggcggaggtggtggcaggaactttggtggctat
ggaggtggctctaacaatggtggatatggccgtccaggacgattttga
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