Scomber japonicus (chub mackerel): 128357940
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Entry
128357940 CDS
T09718
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128357940 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128357940 (trim33)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128357940 (trim33)
Protein kinases [BR:
sjo01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
128357940 (trim33)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128357940 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
UvrA_inter
Motif
Other DBs
NCBI-GeneID:
128357940
NCBI-ProteinID:
XP_053174339
LinkDB
All DBs
Position
4:complement(9952451..9977034)
Genome browser
AA seq
1216 aa
AA seq
DB search
MADNKSDEDMDPSANTDSVPSAQDSEQPETKVENAVTITETNSKGGEEMESRDNANEAPT
PTSDGGDVSGGGVDIGGGAAAGAGGEADGTNEVSPTGTSSTSTEPAAAEAVAAGEAPAGG
LTTEMSPPPNVMAPAATPVSTPVNLLDTCAVCKQSLQSRECEPKLLPCLHSFCLKCIPQP
DRQISVQVPGPHGQADTHIVNVMRCSVCHQDYKQSDIIDNYFVKDTTEATSTSDEKSAQV
CTSCEDNAGTIGFCVECGEWLCKTCVEAHQRVKITKDHKIHTKEDADAASESVGTPGQRP
VFCPIHKQEPLKLFCETCDTLTCRDCQLQEHKEHRYQFLEEAFQNQKGIIESSMAKLQEK
KNYVHYSVSQVQSRLKELNETHRKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKERSM
RLVSQHKDTTQLAQQIHHVLNFCHWAISTGSSTALLYSKRPILFQLRQLFKARLEPAPQA
NGVVRFFCDPTFWARNVVNLGNLVIEKPPPPPQPPGVMVAGPPISPGQSQPGKHPGQINL
AQLRLQHMQQAAYAQQKQQQQQQQHQQQIQQQMRIASQMSQQHARQTGPPMAQQQPPRLI
SMQQLQRGPGGMNGGPGPPMYPSSHHMRLSGMPQGRMPSAQPRHNGQQYPSMMQPQLQRQ
MSIESEMSHQRFRFLLQSGHSNPGHAGPFPVASLHNANPTSPTSASMAGAHAHRGPTSPI
IGPIELIPSVTNPENLPCLPEIPPIQLEDAGSSNLGHLLTRYITASTQNQLGSVDMNPSP
GLSTHSPGSSGLSNSHTPARPSSTSSTGSRGSCSSAGRAGTGGGAAVEQVRVKQEPGTDD
SYNCPASSLKTERGNDAGRSACMMSSPEDSPLPVLGVVSTGQDAVRALGERIKTEPQSDT
PCSGLNGSSTSTSSSSATTMTSTTSSSTENSSTTTTTTTTGSQLTNGNLDKGAETKGDRA
AAESANPGGKEDDPNEDWCAVCINGGDLLCCDHCPKVFHMKCHVPTIKIFPKGDFLCTFC
RSVSSPEIVYCDESRKVKGEHDLNPEDQRRCERLLLYIFCHELSVGFREPVPSSVPNYYR
IIKKPMDLKKVKKKLQLRSSHYYQSIQDFVSDMRLVFKNCAEYNEMSRIIQVYDEEKQIN
TQAGSEMAISGKAVSLYFEEKLREIFPEQNFPETTEPESMETEEKEGDVDTDDSGEDFIQ
PRRKRLKTDEKVVHIK
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaaaagcgatgaggatatggatccgtctgctaatacggactcagtgcct
tcagcgcaagatagcgaacagccagaaacgaaagtcgaaaatgcagtcacaataacagaa
acaaattcaaagggtggtgaagaaatggagtcccgtgataacgctaacgaggcaccgaca
cccaccagcgacggaggggacgttagcggcggcggagtggacattggtggtggcgctgct
gccggagcgggaggtgaagccgatggcactaacgaagtgagcccgactggaacaagcagc
accagcacagagccggcggcagctgaagctgttgccgccggggaggctcctgctggcggg
ctcaccactgagatgtccccccctcccaacgttatggctccggcggccacaccggtatcc
actcccgttaatttactggatacgtgcgcagtgtgtaaacaaagtcttcagagccgagaa
tgtgaaccaaaacttctgccttgtctgcactctttttgcctcaaatgcatcccgcaacca
gatagacagataagcgtacaggtgcctggaccacacgggcaagctgacacacacatagtg
aatgttatgcgctgttcagtgtgccaccaggactacaaacagagcgatattatcgacaac
tactttgtcaaagacaccacagaggctaccagcacatctgatgaaaagtctgcacaggtg
tgcacaagttgtgaggacaatgcaggaaccataggcttctgtgtggagtgtggagaatgg
ctgtgtaagacgtgcgtggaagcccaccagagggtcaaaatcaccaaggaccacaagatt
cacacgaaggaggacgctgacgctgcctctgagtctgttggtacaccaggacagagaccg
gttttctgtcccattcacaagcaggagccactgaagcttttctgtgagacctgtgacaca
ttgacctgtagggactgccagctgcaggagcacaaggagcacaggtaccagtttctggag
gaggctttccagaaccagaaaggcatcattgagagcagcatggccaaactacaggaaaag
aagaactacgtccattactctgtctctcaggtgcaaagcaggttaaaagagctgaatgag
acgcataggaaggtggagcatgaaatcaaaatcgcagtgtttactttaattaacgagatc
aacaagaagggcaagtccttgttgcaacagttagagagtgtgaccaaagagcgcagtatg
aggctcgtgtctcaacataaggatacaacccagctcgcccaacagatccaccatgtgctc
aacttctgccactgggccatcagtactggtagcagcacggcgctgctttacagcaagagg
ccgattctgttccagcttcgccagctcttcaaggcaagattggagccagcaccccaggcc
aacggagttgtgcgctttttctgtgatccaacattctgggccagaaatgtggtcaatcta
ggcaatttggtaatcgagaagccacctccacccccacagccgcctggcgtaatggtagca
ggaccgcccatttcaccaggtcaaagtcaacccggcaaacacccaggacagatcaacctg
gcccagctccggctgcagcacatgcagcaggcagcgtacgcccagcaaaagcaacagcag
caacaacagcagcaccagcagcagattcagcaacagatgcgcatcgcttcacaaatgtcc
cagcagcacgccagacagactggaccgcccatggctcagcagcagcctccaaggctcatc
agtatgcagcaactccagagagggcctgggggtatgaacggtggtccaggtccccctatg
tacccatcgtctcaccacatgcgtctatcgggtatgccacagggtcggatgccctcagct
cagccgagacacaacggacagcagtatccctccatgatgcagcctcagctacagagacag
atgtctatagaatctgagatgagccaccaaaggtttcgtttcttactacaatcagggcat
tccaacccagggcacgcaggccctttcccggtggcatcccttcataacgccaaccccaca
agtcccaccagtgccagtatggctggagcccacgctcaccgcggccctaccagccccatc
attggtcccatcgagctcatcccctccgtcacaaatcctgagaacctcccctgcctacct
gagatcccacccattcagctggaggatgccggttccagcaaccttggacacctcctgact
cgctacatcaccgccagcacccagaatcagttaggctcagtggacatgaatccatcaccc
ggactgtctacacactctcccggatcttcaggtctgtctaactctcacacaccagcacga
ccttctagtacgtccagcacaggcagcagaggcagctgtagctctgcagggagggcgggg
accggtggcggagctgcggtggagcaggtgagggtgaaacaggaacccggtacagacgac
agctacaattgtccagcttcttctctgaagacggagcggggcaatgatgcagggaggagt
gcttgcatgatgagcagtcctgaggacagcccccttcctgtattaggagttgtatctaca
ggtcaagatgctgtcagggctttaggggagcgcatcaaaaccgagccccagtctgacaca
ccttgctctggactaaacggctccagtacctccacctcctcttcttccgctaccactatg
acctccactacctcgtcgtccactgagaacagcagcaccaccaccaccaccaccaccaca
ggctctcagctcacgaatggaaacttggacaaaggggcagagactaaaggggacagggcg
gcggccgaatcggccaatccaggcgggaaggaagatgaccccaacgaagactggtgtgct
gtttgtatcaacggtggtgacctgctgtgctgtgaccactgtccaaaggtgtttcacatg
aaatgccacgtacccaccatcaaaatcttcccaaagggggacttcctctgcacattttgc
cgaagtgtatccagcccagagatagtgtactgtgacgaaagcaggaaggtcaaaggagag
cacgacctgaatcctgaagaccagaggagatgtgaacgtctcttgctgtacatcttctgt
catgagctcagcgtgggcttcagggaacctgttccttcctctgtgcccaactactacagg
atcatcaagaaacccatggacctgaagaaagtcaagaagaagctgcagttacggagctcc
cactactaccagtccatccaggactttgtgtccgacatgcgcctggtcttcaaaaactgt
gcagaatacaatgagatgtctcgaataatccaggtttatgatgaggagaaacagattaat
acgcaggcgggatcggagatggcgatatccggcaaggcagtgagtctgtactttgaggag
aagctgcgggagatcttcccagagcagaacttccccgaaacaactgaacccgagtccatg
gaaacagaggaaaaagagggagacgttgacacggacgactccggggaggacttcatacag
cccagacgcaaacgtttaaaaacggatgagaaagtcgtccacatcaagtga
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