KEGG   Scomber japonicus (chub mackerel): 128358001
Entry
128358001         CDS       T09718                                 
Name
(RefSeq) tubulin alpha-1C chain-like
  KO
K07374  tubulin alpha
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04210  Apoptosis
sjo04517  IgSF CAM signaling
sjo04530  Tight junction
sjo04540  Gap junction
sjo04814  Motor proteins
sjo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    128358001
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128358001
  09143 Cell growth and death
   04210 Apoptosis
    128358001
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128358001
   04540 Gap junction
    128358001
  09142 Cell motility
   04814 Motor proteins
    128358001
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128358001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128358001
   03036 Chromosome and associated proteins [BR:sjo03036]
    128358001
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sjo04812]
    128358001
   04147 Exosome [BR:sjo04147]
    128358001
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128358001
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     128358001
Cytoskeleton proteins [BR:sjo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    128358001
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128358001
  Exosomal proteins of other body fluids (saliva and urine)
   128358001
  Exosomal proteins of colorectal cancer cells
   128358001
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 128358001
NCBI-ProteinID: XP_053174427
LinkDB
Position
4:29031663..29034250
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPAN
QLVKCDPRHGKYMACCLLFRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSLGDEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctcagtgcacgttggtcaggctggagtccagattggaaatgcctgc
tgggagctttactgccttgagcatggcatccagccggacggacagatgcctagtgacaag
acaattggaggaggagatgattccttcaacaccttcttcagtgagactggagccggaaag
cacgtccccagggctgtttttgtcgatctggagcccacagtcatcgatgaggtacgcagt
gggacctaccgccagctcttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgtggacactacaccatcggcaaagagatcattgacttggtgctggac
aggatccgcaaactggctgaccagtgcaccggccttcagggtttcctggtgttccacagc
ttcggaggtggcaccggctctggtttcacctccctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctcaatctacccagctccccaggtatccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagacaatgaggccatctacgatatctgccgtaggaacctcgatatcgat
cgtcctacttacaccaacctgaataggttgatcagtcagattgtgtcctccatcactgct
tcccttcgttttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctacgcccccgtcatctcagctgagaag
gcttaccatgagcagttaacagtatctgagatcacaaacgcttgctttgagccagccaat
caattggtgaaatgtgaccctcgccacggcaagtacatggcttgctgccttctgttccgt
ggtgatgtggtgcccaaagatgtgaatgctgctattgccgccattaaaaccaagcgcacc
atccagtttgtggactggtgtcccactggtttcaaggttggcatcaactaccagcctccc
actgtggttcctggtggagatctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaagacatggcagctctggagaaggattacgaggaggtgggagcagatagtttg
ggagatgaggatgaaggagaagagtattaa

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