Scomber japonicus (chub mackerel): 128358001
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Entry
128358001 CDS
T09718
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04210
Apoptosis
sjo04517
IgSF CAM signaling
sjo04530
Tight junction
sjo04540
Gap junction
sjo04814
Motor proteins
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128358001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128358001
09143 Cell growth and death
04210 Apoptosis
128358001
09144 Cellular community - eukaryotes
04530 Tight junction
128358001
04540 Gap junction
128358001
09142 Cell motility
04814 Motor proteins
128358001
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128358001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128358001
03036 Chromosome and associated proteins [BR:
sjo03036
]
128358001
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128358001
04147 Exosome [BR:
sjo04147
]
128358001
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128358001
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128358001
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128358001
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128358001
Exosomal proteins of other body fluids (saliva and urine)
128358001
Exosomal proteins of colorectal cancer cells
128358001
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
128358001
NCBI-ProteinID:
XP_053174427
LinkDB
All DBs
Position
4:29031663..29034250
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPAN
QLVKCDPRHGKYMACCLLFRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSLGDEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctcagtgcacgttggtcaggctggagtccagattggaaatgcctgc
tgggagctttactgccttgagcatggcatccagccggacggacagatgcctagtgacaag
acaattggaggaggagatgattccttcaacaccttcttcagtgagactggagccggaaag
cacgtccccagggctgtttttgtcgatctggagcccacagtcatcgatgaggtacgcagt
gggacctaccgccagctcttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgtggacactacaccatcggcaaagagatcattgacttggtgctggac
aggatccgcaaactggctgaccagtgcaccggccttcagggtttcctggtgttccacagc
ttcggaggtggcaccggctctggtttcacctccctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctcaatctacccagctccccaggtatccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagacaatgaggccatctacgatatctgccgtaggaacctcgatatcgat
cgtcctacttacaccaacctgaataggttgatcagtcagattgtgtcctccatcactgct
tcccttcgttttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctacgcccccgtcatctcagctgagaag
gcttaccatgagcagttaacagtatctgagatcacaaacgcttgctttgagccagccaat
caattggtgaaatgtgaccctcgccacggcaagtacatggcttgctgccttctgttccgt
ggtgatgtggtgcccaaagatgtgaatgctgctattgccgccattaaaaccaagcgcacc
atccagtttgtggactggtgtcccactggtttcaaggttggcatcaactaccagcctccc
actgtggttcctggtggagatctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaagacatggcagctctggagaaggattacgaggaggtgggagcagatagtttg
ggagatgaggatgaaggagaagagtattaa
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