Scomber japonicus (chub mackerel): 128358321
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Entry
128358321 CDS
T09718
Symbol
carmil2
Name
(RefSeq) LOW QUALITY PROTEIN: capping protein, Arp2/3 and myosin-I linker protein 2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128358321 (carmil2)
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
128358321 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
128358321
NCBI-ProteinID:
XP_053174532
LinkDB
All DBs
Position
5:33063418..33116678
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AA seq
1835 aa
AA seq
DB search
MDSIVRDKISDKISELLKPHRVCLVKPIILNQSSQSSSRSANRFLVLSLWRGYLVVNKQP
VRVESTFSFLEICSIDIHSLTQIVLETDRKTLSFSVLHIEDLEAMVSHMTGSLKRIFPDS
SPGKLLKTIPPELEQRLHTLTSRIEEELNGQPGSCGGFSDTYAALCDFNEMPFREEIQWD
VDNIYNMHKWRQFNLQDFSHLDSRDLAIAVAALSFNQWFTKIYSKELKLSVDIQQQLTFL
LSRSPSLEELSLEASGLKLDFAIKMAAALRDHTSSTLQSINLSGNAIEDKGVIALSLELE
NLVEGLKYLSLSRVSMTARGLGCLSQVLSTNQLFSVSLTHLDLSDNPGSLVTEDATFLFK
FLSSTNSLSHLDLSDTNCPLDTLFVSLSAGCCYKLMHLNLARNPFSHRKVRGVTRSIREF
FSQSCELKYVGLSATKLPPQALRLLLQGLATNTRLCGLELDLSSCELRSAGAQVIQEHIS
EATAITSLDISDNGFENNMVTLILSLGRCHSLHHLALGRNFAMKSRALTDVLHRIAQLIQ
DEECPLQSLSVCDSKLKTGMHILLSALGGHAALAQLDISGNNIGDTGAKMLSKALMNNTG
LRTLIWDRNSVTARGFQDVADALERNVTLQQVSLPLADITQSYRSSPDRTKEALHKIQQC
LDRNNQRQCDRVELRQMYRTQQFEKQVHGLCRQLEDSLKRLTHCSIQELQPDILAAHEVL
HNAKESLKLLPSLYEAGRKWTPDGDLVNCILTDAATALTDEFTRSIQELAQGLMRSAEAV
CPRVVQRSSVVECVSESVSKRSRQTHTFLRNTLVDNAGKIISNRLRELRRSLSVSLAESI
SEQLQQDLKMAQDKIDCIIKENSCSQRNSIPELRLVDGDFPTDDYSPAFWRNSFHSKSLR
PAPSIKSLLDADWEQQSRDRGAERERGGGAGDEGGGRSGLHWLPTATPLSVTASSPSLSP
CTSPSPSPPGRRGWRRGEGEAAAVDAAAAISGARGASFIPPPSLPLLYSISARAPVEAAG
RGGLPRREAPFPGCGPSPGPLPGPGYPASPMEPLPTQGQTLRHYTASRPRPRRTHTQPPS
SRPQEPVSKVEENEATEGMGRVDEGVEEFFTKKIIPDYALKGRWEESNSAQATPSESSST
PSASTPFSSSSDHITSYATTTPVTSPSVPSTDTSFTSTDVPSLSTSSTPSTTSSSVTAPT
TTTTTLPTKNIKKKFGDFFAFKRARAGRAAKAGGGEGGGGEAVKVKRTSIADLIRPLREA
KERERERERDKEREKERGTRSGEDANVSNDAATTEGTVAASQHLAGDARETVAPAKTLTT
TTPPSETPPSYPVIATTPDLTTATLSNAEEEAATSLPDLPGRTPSPVVTSPLTEQERSSM
LMKEMKMGGTPYGERRLKVTKRSLREGKSQSLILLTGLEPEDKDNTHSKKHVSESTSSFE
QRLQVMLHRMGVAKTPPAETKSNQNKDEELRKANSEGAILDKPDPPPAYMKPRTMSTSSA
DPRHPMRALDHIRPDPPLYPKPAVPDRPVGPLPPKPAVAAKPPIPTPTGPAGGGARPSSA
PPSSSSAEGVQLRAHTHDGRTAESLTQNESQEGPRGAAPTPSPRKELLPPAPSPWRGGPS
TQDRSEKAQSVTDESLPKPRQHLKPLPQRRAVSVHEDALAMTQELKAVLQRSPIRFRGNR
GDLPTCTEDPTSVWKTGNQAAEEKKEAGCGGTLDQSKPPPQEVSGCPSSAAQAQKEEAST
PRLFSPTATADKPPPTLEKPSLTPTSHAKGPGTISSETLQRPQASPPPPHGKKSPGTLAA
AVDVGNGTQERGEAVSKQHTTKAEPADQRTEPPSL
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggacagtatagttagagataagatctcagataagatctccgagctgctgaagcctcac
agagtctgtctggtgaagcccatcattctaaatcaatccagtcagtcaagctcaagatca
gccaacaggtttctggtgctgagtctatggaggggttatctggttgttaacaagcagcct
gtcagggtagagagcacgttcagcttcctggagatttgctccatcgacattcacagtctc
acacagattgtgttggagacagacagaaagactcttagtttcagtgtcttgcacattgag
gatcttgaggccatggtcagtcacatgactggctcactgaagaggatcttccctgattca
tctccagggaagctgttaaagacgattcctcctgaacttgagcagagactccacacactc
accagtagaatagaagaggagctgaatggtcaacctggatcctgtggaggattctctgat
acctatgctgctctgtgtgacttcaatgagatgccgttcagagaggagattcagtgggat
gttgacaacatctacaacatgcacaagtggagacagttcaacctgcaggacttcagtcac
ttagatagcagggacttggcaatagcagtagcagctctgtctttcaaccagtggtttacc
aagatctacagcaaagaactcaaactgtcagtagacatccagcaacagctcaccttcctg
ctgtccagatctcccagtctggaggaactctcactggaggccagcggactcaaactagac
tttgcaatcaaaatggccgctgcactgcgggatcacacctcctctacactgcaatccatc
aacctctcaggcaatgccattgaagacaaaggtgttatagcacttagtctggagttggag
aatctagttgagggacttaaatacctctctctgtcccgggtgtccatgacagcaagaggt
ctcggctgtctgagtcaggtgttatccaccaatcagctgttctcagtatctctgacccac
ctggatctgtctgataaccccggcagcctggttactgaagacgccacgtttctctttaag
ttcttgtccagtactaactctctgtctcatctggacctcagtgataccaactgccctcta
gacacgttgtttgtgtctctgtctgctggatgttgttacaaactaatgcacctgaacctg
gccaggaatcctttcagccacaggaaggttcggggggtgaccaggagcattcgagagttc
ttcagtcaaagctgtgagctcaaatatgtcggcctatctgcaaccaaactacctccacaa
gctctcaggttattactacagggtctggctactaacactcgtctctgtgggctggagctg
gacctcagtagctgtgaacttcgctcagcaggagctcaggtgatacaggaacacatctct
gaagctacagctattacaagtctggatatctctgataacggttttgagaacaacatggtg
actctgattctgtctctgggtcgatgccactctctccatcacctcgcactgggaagaaac
tttgctatgaagtccagagccttgactgatgttctccatcgtatagctcagctcattcag
gatgaagagtgtcccctgcagtccctgtcagtgtgtgattccaagctgaaaacagggatg
cacatcctgctcagcgctctgggcggccacgctgctctggctcaactggacatcagtgga
aacaacatcggggacactggggctaaaatgctgtccaaggccctgatgaacaacacagga
ctgaggactctgatatgggacagaaacagtgttactgccagaggtttccaggatgtggct
gatgctttggagaggaacgtcactctgcagcaggtgtctctccctctggctgatatcaca
cagagttaccgcagcagccctgacagaaccaaagaggctctgcacaagattcagcagtgt
ttagacagaaacaaccagagacagtgtgacagagtggaactgcgacaaatgtacagaact
caacagtttgaaaagcaggtccatggtctgtgccggcagctggaggacagtctgaaacgt
ctgacccactgcagcattcaggaactccaacctgacatcctggcagctcatgaagtgctg
cacaatgccaaagagtctctgaagctgcttccctctctgtatgaggcgggcaggaagtgg
acccctgatggagacctggtgaactgcatcctgactgatgctgctactgcattgactgat
gagttcactagaagcatacaggagctggctcaaggcctgatgaggagcgcggaggcagtg
tgtccacgagtggtccagagatcaagtgtggtcgagtgtgtgtcggagagtgtgtccaag
agaagcaggcagacacacacattcctcagaaacactctggtggataatgcggggaagatc
atcagcaacagactgcgtgaactgagacgatctctgagtgtctctctggctgaaagcatc
agtgaacagctgcaacaggatctgaaaatggcacaggacaaaatagattgtattatcaaa
gagaattcatgcagtcagagaaacagcatcccagagctccgcctggtcgatggcgacttc
cccactgacgactatagtccagcattctggagaaatagtttccactccaagagcctgagg
cctgctccttcaattaaaagtctcttggatgcagactgggagcagcagagcagggacaga
ggagcggagagagagaggggaggaggcgccggagatgaaggaggaggaaggagtggcctc
cactggttgccgacagcaaccccactgtcagtcacggcctcaagcccctccctgtcccct
tgcacctccccttccccctcccccccgggacggagggggtggaggcggggggagggggag
gcggcagcggtggatgctgcagcggcgatatcaggagcgagaggagcatcgttcattcct
cctcccagtctccccctcctatactccatctccgctcgagctccagtggaggctgccggc
cgcggaggcttacccagacgagaggctcccttccccggctgcggccccagcccaggcccc
ctccctggccctggataccccgcttctcccatggagcctctacccacccagggacagaca
ctaaggcactacaccgcctcccgaccgcggccacgacgcacacacacacagcccccctcc
tccaggccccaggagccagtgtcaaaagtagaagagaatgaggccactgaggggatgggc
agagtggatgaaggagtagaagagttcttcaccaagaaaatcatccctgactatgcacta
aaaggccggtgggaggagtcaaactctgcccaagccaccccctcagagtcaagttcaacc
ccctcagcctcaacccccttttcctcctcgtccgaccatatcacctcctatgccaccacc
acccccgtcacctccccttctgtcccttcaactgacacatccttcacatccactgatgtt
ccatccctctctacatcctccactccctccaccacctcctcttctgtcaccgctcccacc
accaccaccaccacacttcctaccaaaaacatcaagaaaaagtttggcgacttcttcgcc
ttcaagagggctcgagccgggagagccgccaaggcaggagggggagagggaggaggagga
gaggcggttaaggtcaaaaggacctccattgcagacctcattcgacccctccgcgaggcc
aaagaaagggagagagagagggagagggacaaggaaagagagaaggagagagggacaaga
tcaggggaggatgctaacgtttctaatgatgccgccaccacagaaggaaccgttgccgcc
agtcaacatcttgcaggcgatgcgagggaaacggtggcgcctgccaagacgttaaccacc
acgacaccccccagtgagacccctccctcataccccgtcatcgccacgacccctgacctc
accaccgctacgctctcaaatgcggaagaagaggcggcgacctcacttcccgacttgcca
ggccgaactccgagtccagtggtcacttcccctctgactgagcaggagcggagcagtatg
ctgatgaaggagatgaagatgggagggactccgtatggagagaggaggctgaaggtaacc
aagagatcactgagagagggcaagagccagagtctcatactgctgacgggattagagccc
gaagacaaggataacacacacagtaagaagcatgtatctgagagcacatctagttttgaa
cagaggctgcaggtgatgctgcacagaatgggcgtggccaaaactccacctgcagaaacc
aagtccaaccagaataaagacgaggagctgaggaaagccaactctgagggtgctatcctg
gacaaacctgacccacctcctgcatacatgaagcccagaaccatgtctacatcatcagcc
gaccccaggcatccaatgagagcgctggaccacatccggccggaccctcccctttaccca
aaacctgccgtccccgatcgtcccgttggccccctgccacccaaacctgccgtcgcggcc
aagcctcccatccccaccccgactggtcctgcaggaggaggagctcgtccctcctccgct
cctccttccagcagctcagcagagggagtccagctcagagcacacacacatgatggcagg
acagcagagagtcttacacagaatgaaagtcaggagggtcccaggggtgcagctccaact
ccgtcccccaggaaagagctgcttcctccagccccgtctccatggagggggggtcccagc
acacaggatcgctctgagaaagcacaatcagtgaccgacgagagtcttcccaaaccaagg
caacacctgaagcccctcccacaacggcgagctgtgtccgtccatgaggacgctctggcc
atgacacaagagctgaaggctgtgttacaaaggtctcccatccgtttccggggcaacaga
ggggatctgcccacctgcaccgaagatccaaccagtgtctggaaaacagggaatcaagca
gctgaagaaaagaaggaggcaggctgcggagggacgctagatcaaagcaagcccccccct
caagaggtctctgggtgtccctcctctgcagctcaggctcagaaagaagaagcatcaaca
ccgagactcttcagtcccaccgcaactgccgataaaccccctccaaccttggaaaaaccc
tccctaacccccacatcccatgccaagggccccggcacaatctcatccgaaaccctgcag
cgcccccaagcgagccccccgccgccccacgggaagaagagccccggcacgttagcagcg
gcggtggacgtaggtaacggcacacaggagagaggagaggcggtctctaaacagcacacg
acaaaggcagagccagcagaccaaagaactgagcctccctctctctga
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integrated database retrieval system
