Scomber japonicus (chub mackerel): 128358336
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Entry
128358336 CDS
T09718
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03320
PPAR signaling pathway
sjo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128358336 (pparab)
03320 PPAR signaling pathway
128358336 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128358336 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128358336 (pparab)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128358336 (pparab)
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
128358336 (pparab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128358336
NCBI-ProteinID:
XP_053174550
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Position
5:complement(15347870..15377146)
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AA seq
469 aa
AA seq
DB search
MVDMESHYHPPSPLEDSVLGSPLCADDDFIGSMEELQDISESMGNSALSSLDVPEYQYSS
NGSEGSAVLDALTPASSPSSVVYGVAACQEDLTSSTSSLNLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQS
EKLKLKAEMVTGDREVEDPQVADQKTLARQIYEAYLKNFNMNKAKARTILTGKTSNPPFV
IHDMDTLQLAEQTLVAKMVGSAGMLKDREAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNALELDDSDLALFVAAIICCGDRPGLVNVGHIERMQESIVQVLQLHLLANHPD
DTFLFPKLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactaccaccccccttcacccctggaggactctgtgctgggc
agccccctgtgtgccgatgatgacttcattggcagcatggaggagctgcaggacatctcc
gagtccatgggcaacagcgctctcagctcccttgatgtcccagaataccagtactccagc
aatggttccgaaggctccgctgtcttagatgccctaaccccagcatccagcccatcttcg
gttgtttacggggtggcagcatgccaggaggacctaacatcttccacctcatcgctaaat
ctggagtgtcgagtgtgtgctgaccgtgcctcgggctaccactatggagtccatgcctgc
gagggctgtaagggtttttttcggaggaccatacgcctgaagctggagtatgacaagtgt
gagcgccgctgcaagatccaaaagaagaaccgcaacaagtgccaatattgccgcttccag
aagtgcctgtcagtgggcatgtcccacaacgccatccgttttggtcggatgccccagtca
gagaagctgaagctgaaggcggagatggtgacgggggacagggaggtggaagacccccag
gtagctgaccagaagacgctggccaggcagatttatgaggcctatctcaagaacttcaac
atgaacaaggcaaaagctcgaaccattcttaccgggaagaccagcaatcctcctttcgtc
atccatgacatggacactctccagctggcagagcagacactggtggcaaagatggtcggc
tcggcgggaatgctaaaggacagggaggcagaagttcgaattttccactgctgccaatgc
acctcggtggaaacggtcaccgagctcacagaatttgcaaagtccgtccccgggttctca
agcctggacctcaatgatcaggtgactcttttgaaatatggcgtgtatgaggccctcttt
gccctactggcctcctgtatgaacaaggatgggcttcttgtagcgtatggctcagggttc
atcacccgggagtttctcaagagcctacggcggcctttcagcgacatgatggagccaaag
ttccagtttgccatgaagtttaatgcactggagctggatgacagtgacctggctctgttt
gtggctgctatcatctgctgtggagaccgaccaggcctggtgaacgtggggcacattgaa
cgaatgcaagaaagcattgtgcaggtgctacagctccatcttctggccaatcatcccgac
gacactttcctcttccccaagctgctgcagaaactggctgacctccggcagttagtcacc
gagcacgcgcagctggtgcaagagatcaaaaagacagaagacacctcactgcacccactc
ctgcaggagatttacagagacatgtactga
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