Scomber japonicus (chub mackerel): 128358401
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Entry
128358401 CDS
T09718
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128358401
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128358401
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
128358401
NCBI-ProteinID:
XP_053174630
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Position
5:complement(13383839..13414382)
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AA seq
519 aa
AA seq
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MSFKSLKEFGVSAERLGSICKRWMARVQSNGNGSKMNGSLEHLDQPDPDSIKMFVGQIPR
AWSETELKELFEPFGAVHQINILRDRTQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTL
SGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEVRMMFSSFGQIEECRILRGPDG
QSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKFADTQRDKEQRRLQQQLVQQI
QQLNSASTWGNLAGLGTLTPQYLALLQQATSTSNQSSFNGIQRLGGVNPLQLQNLATLAA
AAAAAQSSASPTSAALSTNSGALAALGSPAGSTAGSSAMSTLASLGTLQGLTGNSMGLNS
LNALTSSVSGMGAMNGGLGASMANGSAASSMDALTQAYSGMQQYTASALPSLYGQSLLQQ
SIAGSQKEVGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFV
SYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaagtccctcaaggagtttggtgtttctgctgaacggctgggctcaatttgc
aagagatggatggctcgcgtccaaagcaacggaaacggcagcaagatgaacgggtcgctg
gaacacctggaccagccagacccagactccatcaagatgtttgtgggacagatcccgcgc
gcctggtcagaaacagaacttaaagagctttttgagcctttcggagccgtgcatcagatc
aacatcctccgcgatcgtacccagaatccccctcagagcaaaggatgctgttttgtaact
ttttatacaagaaaagctgcactggaggcccagaatgcactgcacaacataaagacctta
agtgggatgcatcatcctatccagatgaaacccgctgacagtgagaaaacaagtgcggta
gaagacagaaaactcttcatcggtatggtctcaaagaaatacggcgagaacgaggtcaga
atgatgttctcgtctttcggacagatcgaagaatgccgaattctccgggggccagatggt
cagagcagaggctgtgcgtttgtcacatttgctaccagggcaatggcacagaatgcaatc
aaaaccatgcatcactctcagactatggagggatgttcctcacctttagtggtgaagttt
gccgacacacagcgagataaggagcagcggcgcctgcagcagcagctagtacagcagatt
cagcagctcaacagcgcctctacctggggaaacctggccggcctggggaccctcacaccg
cagtacctggctttgctccagcaagcgacatccaccagtaaccagagcagtttcaatggt
attcagaggctaggaggtgtgaatcctctccagctgcagaacctggccacgttagccgcc
gccgctgccgcagcccagagttctgccagcccgacctccgccgccctgtctacaaacagc
ggagccctggcggctctgggcagtccagccggttcaacagcagggtccagtgccatgagc
actttggcatctctgggcaccctgcagggtcttactgggaactcaatgggcctcaacagc
ctcaacgctctcaccagcagcgtcagtggtatgggggccatgaatggaggtcttggagcc
tccatggccaatgggtcagcagccagttccatggacgctctgacccaggcctactcaggg
atgcagcagtacacagcctccgccctgccctccctctatggtcagtctctcctgcagcag
agcattgcaggcagtcagaaggaagtagggccagagggtgccaacctgttcatctaccac
ctgccccaggagtttggggaccaggatcttctgcagatgttcatgccttttggaaacgtg
gtctctgccaaagtcttcatcgacaaacagaccaatctgagcaagtgctttgggttcgtc
agctatgacaatcctgtgtctgcacaagctgccatccaggccatgaacggtttccagatc
ggaatgaagaggctgaaggttcagcttaagcgctccaagaacgacagcaaaccctactga
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