Scomber japonicus (chub mackerel): 128358463
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Entry
128358463 CDS
T09718
Symbol
nr2c1
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1
KO
K08543
testicular receptor 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128358463 (nr2c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128358463 (nr2c1)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128358463 (nr2c1)
Nuclear receptors [BR:
sjo03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
128358463 (nr2c1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
FtrD-like
Motif
Other DBs
NCBI-GeneID:
128358463
NCBI-ProteinID:
XP_053174731
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Position
5:complement(13219846..13226902)
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AA seq
611 aa
AA seq
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MDGQTQRIQLVSADSSMALGHRIQIVTDQQTGQKIQIVTALEPSSPGKQQFILANADYSP
GGKVILAKQEVSPNKVILAAPDGSGVNQLLFASPELAGQQIQFVTESSDPSIVKTVVEYC
VVCGDKASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGECAINKLHRNRCQYCRLQRC
IALGMKQDSVQCERKPVEVTTREKSVNCAASTEKIYIRKNLCSPLAATPTFVSDKETARS
TSLLESSMLLNIQQPFSKLENTILIPTSPDKEDDPSQGDLGTLANVVTSLAHLNKARETS
DSGNDLMGVETLSNGDSSMTDIQGEEQTPSDITRAFDTLAKVLHSGDGTAADSLEATMQL
MSGDQSGPVVELEGPLLSDSHIPFKLMMPLPVPEYLNVNYICESASRLLFLSMHWARSIP
AFQALGGQDNDINLMKACWNELFALGLAQCSNVMNVGTILSAIINHLQTSLQEDKLSPER
VKLVMEHIWRMQEFCNSMSKLSPDAYEYAFLKAIVLFSPDHPGIDNTPQIERFQEKAYME
LQDYVTRTYPEDSYRLSKLLLRLPALRLISAAVTEELFFAGLIGNVQIDSIIPYILKMES
TDYNSQAVSGV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggatgggcagactcaaaggattcaacttgtgtcggcagacagcagcatggctttggga
cacagaatccagattgtgactgatcagcagactggccagaagatccagattgtcacagca
cttgagccatcgtctcctggaaagcaacagtttattctagcaaatgctgattattctccc
ggtggtaaggtgattttggccaagcaagaagtgtcacccaacaaggtcatcctcgctgct
ccagacggctctggggttaaccagctgttgtttgcctcccctgaactggctgggcagcag
attcagtttgtaacggaaagctcagacccgtctattgtcaagacagttgtggagtactgc
gttgtctgtggggacaaagcctcagggcgtcattacggagctgttagctgtgagggctgt
aagggcttcttcaaacgcagcattaggaagaacctggtgtacacatgcaggggctctgga
gagtgtgcaatcaacaagcttcaccgaaaccgctgccagtactgtcgactgcagcgctgc
atagctctcggcatgaaacaagattctgtgcagtgtgagaggaagcctgttgaagtgacc
accagagagaaatctgtcaactgtgcagcctccactgaaaaaatctacatccgcaagaac
ctgtgtagccctctggctgccacacccacttttgtatctgacaaagaaactgccaggtct
acaagtttgctcgagtcaagtatgttgctcaacattcaacaacccttctccaagctggaa
aataccatcttgatcccaacatcccctgacaaggaggatgacccatctcaaggcgacctt
ggtacgttggcgaatgtagtgacatccctcgcccacctcaacaaggccagggagacaagt
gacagcggcaatgatctgatgggagttgagacgcttagcaatggcgatagctcgatgacg
gacatccaaggagaagagcaaacaccaagtgatatcactcgagcgtttgacaccctggcc
aaagtcctgcattctggtgacggcacagcagcagactccttggaggccacaatgcagctg
atgtcaggggaccagtcgggtcctgtggtggagttagagggacctttactctctgacagc
catattcccttcaagcttatgatgcctttgcctgtgccagagtacctcaatgtcaactac
atctgtgagtcagcttcacggctactttttctctctatgcactgggcacgctccatacct
gcctttcaagccttaggtggtcaagacaatgacattaacttgatgaaagcctgctggaat
gagctgttcgccctgggtctggcacagtgttccaacgttatgaatgttggtaccatctta
agtgccattatcaaccatctgcagaccagcttacaggaagacaagttatccccagagcga
gtaaaactcgtaatggagcacatctggaggatgcaggagttctgtaacagcatgtccaag
ctgtccccggatgcttatgaatatgccttcctcaaagccatcgttctcttcagccctgat
cacccaggcattgataataccccacaaatagagcggttccaagagaaggcttacatggag
ctgcaggactatgtaactaggacctacccagaagactcctatcggttatccaagctgttg
ctgcgtcttcctgctctcaggctgataagtgcagctgtcactgaggagctgttcttcgct
gggctcattggcaatgtgcagattgacagcatcataccgtacatcctcaaaatggagtcg
actgattataacagccaggcggtctctggggtctga
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