Scomber japonicus (chub mackerel): 128358480
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Entry
128358480 CDS
T09718
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128358480 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128358480 (nup93)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128358480 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
MIT
Motif
Other DBs
NCBI-GeneID:
128358480
NCBI-ProteinID:
XP_053174752
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Position
5:complement(32459403..32496447)
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEVTAPGRSALDS
VEVAYGRQIYIFNEKIVNGHIHPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTSVEMQMAFVRQGLSFLENSYKNYTMVTVFGNLHQAHLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEIEGHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKTWFQEYMNSP
DRRLSPISENKLRLHYRRVLRNSADPYKRAVYCLIGKCDISDNHGEVADKTEDYLWLKLN
QVCFDDDGSSSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPTVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIISKVAVEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAPQSN
KERLKNTAVAIAERYRSQGVAGEKSVNSTFYLLLDLMTFFDEYHGGHVDRAYDVMERLKL
LPLSQESVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAPAGTPGRPQRTIE
DRDMQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagggtttcggggagcttctgcagcaggctgagcagctagctgcagagaca
gaggcagtgtcagagctgccacacgttgagaggaaccttcaggagatccagcaggcggga
gagagacttcgatctcgtaccctgacccgtacctcgcaagatgctgctgacgtaaaagcg
tcaatcctcctcggttccagaggtttagacatcttccacatttctcagaggttggaaagt
ctaagcgccgccaccaccttcgagcccctggagccagtcaaagacacagacatacagggc
ttcttgaagaacgagagggacaacgctctcctgtcagccatcgaggaatcacgccgcagg
actttcctgttggctgaagagtaccatcgtgagtccatgctggtccaatgggagcaggtg
aagcagagagtcctgcacacactgctcggagcaggagaggacgctctggacttcagtcaa
gacgtggagccgagctttgtgagtgaagtgaccgctccaggaaggagcgccctcgacagc
gtggaggtggcctacggacgacagatctatattttcaatgagaagatagtgaatggacac
attcaccctaatctaggagacttatgtgcttcagtagcagaaagcctggatgacaagaat
gtatcagacatgtggctgatggtgaagcagatgacagatgttttgctggttccagccaaa
gacaccctcaagagtcgcacttctgtagaaatgcagatggcctttgtgcgtcaggggctc
agcttccttgagaacagttataaaaactacaccatggtgaccgtgtttggaaacctccat
caggctcatctaggaggggtgccaggaacgtaccaactagtccgcagcttcctcaacatc
aaactaccagggccgctgcctggcatgcaggacggtgagatagagggccacccagtgtgg
gctgtgatctattactgccttcgctgtggagacctgaacgcagccatgcaggtggtgaac
agagtgcagcaccagctcggagacttcaaaacatggtttcaggagtacatgaacagcccc
gacagacgcctctccccaatttcagagaacaaacttcgcctccactaccgcagagtgctg
aggaacagcgctgacccctacaagagagccgtctactgcctgatcgggaaatgcgacatc
agcgataatcacggagaggtggcggacaagaccgaagactacctttggcttaagttgaac
caggtgtgttttgatgatgacggcagcagctctccccaggacagactgaccctgccacag
ctacagaaacagctgctggaggactatggagagtctcatttctcagccagccagcagccc
ttcctgtatttccaggtgttgttcctcacagctcagttcgaagcggccgtggctttcttg
tttcgcgtggaaagactgaggagtcacgccgtgcacgtggctctggtcctgtacgagcta
cggctgctgttgaagtcttccggtcaaagcgctcagctgctgagtcaggaacctggtgat
cctccaacggtgcgtcgcctcaacttcatccgtctgctcatgctatacactcgcaagttt
gagtccactgatccacgagaagccctgcagtacttctacttcttacggaatgagaaggac
agccagggagagaacatgttcatgcgttgtgtcagtgaactcgtcatcgagagccgagag
tttgacatgttgttggggagattagagaaggacggcagcaggaagcctggagtcatagat
aaatttgcaggtgacaccagagccatcatcagtaaagtggctgtagaggctgagaacaag
ggtttgtttgaggaagcagtcagactctacgagctggccaagaacccagataaggtgttg
gagctgatgaacaggttgttgagtccggtcatcgctcaggtcagcgctcctcagtccaac
aaggagaggctaaaaaacacagctgtggccatcgctgagaggtatcgctctcagggtgta
gcaggagagaaatctgttaatagtacattctacttgctgttagacctgatgacgttcttt
gacgagtaccacggcggtcacgtggacagagcctacgatgtgatggagcgtctgaagctt
cttcctctcagtcaggagagcgtggaggagagagtggctgccttcaggaacttcagcgat
gaggtgcgtcacaacctgtcagaggtgctgctggccaccatgaacatcctgttcacccag
tacaagcgcctgaagggggcgccagcaggaacaccaggacgaccacagaggaccatagag
gacagagatatgcaactgcgcagccaggccagagcactcatcacctttgctggtatgatt
ccctacaacatggccggagacacaaacgcaagactggtgcagatggagttactgatgaac
tga
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