Scomber japonicus (chub mackerel): 128358490
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Entry
128358490 CDS
T09718
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128358490 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128358490 (tubgcp6)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
128358490 (tubgcp6)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
128358490 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Anti-LPS-SCYG
AAA_23
Motif
Other DBs
NCBI-GeneID:
128358490
NCBI-ProteinID:
XP_053174763
LinkDB
All DBs
Position
5:complement(14644909..14668128)
Genome browser
AA seq
1839 aa
AA seq
DB search
MYSSPNIKPSCNSSSITELLGALCECSLSGVSWKRRALGGVSRESFRRALKKRAYGALLS
KLFQDGTKASASGPSAMANTPPRNKVLMICFDLRVAGCREEAERLEEQLEKLTEGASSGL
KEVDSVLELLVHLAGSAPPPPTSFSRDYMRRDRPVLRRPQPWSYQSEELQRLEARAWGLV
CGEEWGTLESLCGTQRLMDGPPGTGLLTLRTKMDVEERFEKETRLTLFGALQHTRTSDID
IRLDLPPVPSNIDVTGLAIRVPNSLDQSEDEGFQSSSNLTPDSQSEPSPSPELDLWEALR
TFEPGKRRCWESVGCPPGKRESLYLTEGGREAFDKLYQLWEGEIRVVSTCTPSPVLPLPL
DSQTQLVSDLLNMLIGVASTTFPLNQSVQFDVRPGVCVSGASAESVSRLLGELAQYGTYY
LRLSRFSLQNADKKGLVFQAFTGGLRKYLHYYRACVLSTPHTLSLLTIGFLLRKVGRQLR
YLSELCCVDGPLGAGQATFPVGVKLLSYLYNEAQNNCSNENYPVLLSLLKSSCEPYTRFV
SDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWVQGYTLHTKDVEDCVPIFLRHIANDVY
VCGKTINLLKICCPQHYICWSELPMPRIAVTFSLQEVEEIERDCAVYRGRMERIAKHSAI
SREEQALRTEQARQELINQVRESAAKTLESIRGRQVSQRLAEEAKKRERFDELKQHLEQE
QEWRSAAKKKQEEDDFSFARELRDREKRLQALEEQLEQRARKELIAQYSHLSEEAARRER
RAMWRVQRMRLDDARAQFFKHDMQQMQAILEKYPCGQKRPPIDILPTQQAALQSTAETLI
QGSSEQQPAETQECEAASPPHDPSSPTLNPLAVDPALISEDIDINDFLAKSPNPDSQHMD
AALQEIGSDLPEACLSTQLVDYDFSAPFSPLEGITGQASVQPRPRWGLAVQPDLIQNHPS
FSHIPIGENMSQIQESFPKASLFGQASKSSFSLGQYIPDEPQKTLKASVNGQPSQASVPV
VDGSGSKTETGILESKVEANMDKNKPAEPIKEHVPSTTPEQGDMGDGAHKVVTDLSDGGG
VETLMVNTQDHNLDAQAKVEIVSSSINVGQYVPEAPLPTSNIHDHVSDSHIKIGEYVSEV
DAPLPSTSVHGHSSDAHIKVGENVSEFVAPLPTQNVHGHASDSHIKIGENVSDIVALLPS
PSIHGHTSDAHIKVGENVSDVVVQLPVPSIHGHSSDANIKLGEFVSNIPEAKLRWSKHGH
ASDCILQLGCVVSGTEPALAPLPGSSYGHSSDSKLGVGCVVSGQELKHSPLPGSTHGHSS
DSSLGVGCVVSKTDLLPSPLPGSIYGHSSDSTLGVGCVVLGMEPQQTALLGGGYGHSSDS
SLGVGCVVKGISKGDQHKTEDSEASKGPKSESTGEQLVEATGSWAAGFGLSPGEKSEQEY
LYALSCQYQVEHYEDCYNLMASSPECQLLKQVTRGPWGLPMDPTLRRPTDTTAVQLSEMV
SLPVLIKNSVTTPLITHVSLVNKAVVDYFFVELGVERHFEALRHFLLMEDGEFAQSLSDL
LFEKLGSGQTPGELLTPLVLNSILSKALQYSLHGDTPLAGNFTFALRFLPETFHPHAPDS
LNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRDVWFHLKRTALVKGAG
RSVQFHQLQLYRHEMQHFVKVIQGYIANQILQVSWSEFTAKLATASDLDAIHRTHADYLN
RAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLIAQPWDSHQGEAVHPSFIAMQQSYNTF
KYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaagccccaacataaagcccagctgcaacagcagcagcatcactgaactactg
ggtgccctgtgtgaatgcagcctctctggggtgtcatggaagcgccgtgccctgggagga
gtctccagagagagtttccgcagagctctaaagaagcgtgcctatggtgccctgctttct
aagctatttcaagatggcaccaaagcgtctgcctcagggccaagtgccatggctaataca
ccacccagaaacaaagtcctgatgatatgttttgacttgcgggtggcagggtgccgagag
gaagcagaaaggctggaagagcagctggagaagctgacagagggagcatcttctggtctg
aaggaggtagactcagtcctggagctcctggtgcatctagctggctctgcacctccaccc
ccgacctctttcagcagggactacatgagacgagataggcctgtgctgcgccggcctcaa
ccctggagctaccagagtgaggagctgcagaggctagaggcgcgggcatggggactagtg
tgcggggaggaatgggggactttggagagtctgtgtggaactcaaagattgatggatggc
cctccaggcacagggctactcactctgaggactaaaatggatgtggaagaaagatttgag
aaggagaccaggctgacactgtttggagcactgcagcacactcgtacctcagacatagac
ataagactggacctgcctcctgttcctagtaatattgatgtaactgggctggctatcagg
gtccctaactctttagatcagtctgaggatgagggtttccagtcatcgtccaatctgacc
ccagactctcagtcagagcccagccccagtccagagcttgatttatgggaggccctccgg
acgtttgagcctggaaagcggcgctgctgggagtctgttggatgcccaccagggaaaaga
gagtctctctatctaacagaaggaggcagggaggcatttgacaagctttatcaactatgg
gagggggagattagggtggtcagcacttgtacaccctctcctgtcctcccactgccccta
gactctcagacacaactagtctctgacctcctcaacatgttgatcggagtggcatccacg
accttccctctcaaccagagtgttcagtttgatgtcagacctggtgtttgcgtgtcagga
gcctctgcagagagtgtgtctcgtctcttgggagagctggcccaatatggcacctactac
ttgaggcttagtcgcttttctttacagaatgctgacaagaagggtctggtcttccaggct
tttacaggtggtctgaggaagtacctgcattactacagagcttgtgttctcagcacgcca
cataccctcagcctcctgactatcggcttcctcctccgcaaagtgggccggcagctcagg
tacctgtcagaactctgctgtgtagatgggcctctgggtgcaggccaggctaccttccct
gtgggtgttaaattgctgtcctacctgtacaacgaagcacagaataactgcagcaacgag
aactatccggtcctgctgtcgctgctgaagagcagctgtgaaccctatacacggtttgtg
tctgactgggtgtatagcggtgtttttcgggatgtttatggagaattcatgatacaagta
aatgaagattacctcagcttcagagacaaacacttctgggttcaaggctacactctacac
acaaaagatgtggaggattgtgtgcccatcttcctgagacacatcgccaatgacgtgtat
gtctgcggaaagaccatcaacctcctcaaaatctgctgcccacagcactacatctgttgg
tcggagctgccgatgcctcgcattgctgtcaccttctctctgcaggaggtggaggagatt
gagagggactgtgcagtgtaccgtggacgcatggagaggattgctaagcatagcgccatc
agcagggaggagcaagccctgagaacagagcaggcacgccaggagctgatcaatcaggtc
agagagtcagcagccaaaaccctggagagcatccgcgggcgccaggtgtcacaacgtctg
gctgaggaggccaagaagagggagcgttttgacgagctgaagcagcacctggagcaggag
caagagtggcgaagtgcagccaagaagaagcaggaggaggatgacttcagctttgccaga
gagctgagggacagagagaagagactacaagccctggaagagcaactggaacagagagcc
aggaaggagctgatcgctcagtacagccatctgtcagaggaagcagctcgcagagagaga
cgggccatgtggagggtgcagcgaatgagactggatgatgctcgtgctcagttcttcaaa
catgacatgcagcagatgcaggcaatattagagaaatacccctgtggccagaagagacct
cccattgacatattgccaacacaacaggctgcactacaatcaacagcggaaactctcatt
caggggtcgtctgaacagcagccagcggagactcaagaatgtgaagctgcatcaccacca
catgacccgtcttcccctaccctcaacccccttgctgtagaccccgcattaatttctgaa
gacattgacatcaacgacttcctcgccaagtcaccgaatcctgacagtcagcacatggac
gcagccctacaagagattggctctgacctacctgaggcctgtctgtcaacacagcttgta
gactatgacttcagtgccccctttagtccacttgaaggtatcactggtcaagcctcagtt
cagcccagaccacgctggggacttgcagttcagcctgacttgatccaaaaccatccgtct
ttttctcacatccccattggagagaatatgtctcaaatccaggagagtttcccaaaggcc
agcctctttggtcaagcttccaaatccagcttttctctaggccagtacatcccagacgaa
ccccaaaaaacattgaaagccagtgttaatggacagccctctcaagcctcagttccagta
gtagacgggagtggctcgaagacagaaacagggattttggagagtaaagtagaggcaaat
atggataagaataaacctgctgagcctataaaagaacatgttccttctaccacaccagag
caaggcgacatgggtgatggtgctcacaaagtagtgacagatctttctgacggtggtggg
gttgaaacactaatggtaaacactcaagaccacaacttagatgctcaagctaaagttgag
attgtttcttcatccattaatgttggacagtatgtaccagaggcaccactaccaacctct
aacatccacgatcacgtgtcagattcacacatcaagattggagaatatgtttcagaagtt
gatgctcctctaccttccaccagtgttcacggtcactcgtctgatgctcacattaaagtt
ggagaaaacgtttcagaatttgttgctcctcttccaactcagaatgtccatggtcatgcc
tcagattcccacattaaaattggtgaaaatgtttcagatattgttgcccttctaccctcc
cccagcattcatggtcacacatcagatgcccacatcaaagtaggggaaaatgtttccgat
gttgttgtacaacttcctgttcccagtatccacggtcactcctctgatgctaatataaaa
ctgggcgagtttgtgtccaacatacctgaagcaaaacttcgctggagtaagcatgggcat
gcctcagattgcattcttcaactagggtgtgtggtgtcaggaactgaaccagctttggcc
cctttacctggaagctcttatggtcattcctcagactctaagttaggtgttggatgtgtg
gtttcaggacaggaattgaagcattctcctcttcccggcagcacccatggccattcctca
gactcaagtttaggcgttggatgtgtagtgtccaaaaccgatctacttccatcaccgcta
ccaggcagcatctacggccactcttctgattcaacactgggggtgggatgtgtggtgttg
gggatggagccacaacaaactgcgctgctaggcggcggttacggccactcatcagattct
tcacttggagttggatgtgtggtgaaggggataagcaaaggagatcaacataaaacagag
gacagtgaagcaagtaaaggtcccaagtccgagagcactggtgagcagctagttgaggcc
acagggtcctgggcagctggctttggtttgtcccctggagaaaagtcagagcaggagtat
ctatatgctttgtcttgccagtaccaggtggaacactatgaagactgctacaaccttatg
gcttcgtctccagagtgtcagctgctgaagcaggtaactcgtggcccctggggccttcct
atggaccccacactgcgcagacccacagacaccactgctgtccagctcagcgagatggtt
tcactgccagttctgataaaaaactctgtcactacgccgctcatcacacatgtatccttg
gtgaataaggcagtggtggactacttctttgtggagctaggggtggaaagacactttgag
gcactgcgccacttcctgctgatggaggatggcgagttcgcacagtccctcagcgatcta
ttgtttgaaaagctgggcagtggccagactcccggtgagctgctgacccctctggtcctg
aactccatcctcagtaaagccctgcagtacagcttacatggggacacccccttggctggc
aacttcaccttcgccctgcgcttcctgccagagactttccatcctcacgcccccgattct
ctcaactgtctggagctacgatacaaggtggactggccgttgaacatcatcatcacagac
agctgcatgaacaagtacaaccgtctgttctcgttcctgttgcaactcaaacacatggtg
tggagcctccgtgatgtctggttccacctcaagagaacagcgctggtgaaaggtgcaggt
cgctcggtgcagttccatcagctgcagctctaccggcacgagatgcagcactttgtcaag
gtaatacagggatacatcgccaatcagatcctgcaagtgtcctggagtgaattcacagcc
aagcttgcgaccgccagcgacctggatgccatccaccgaacacacgcagactacctcaac
agagccatcttcaggggtttgctgacagagaaagcggctccggtcatgaacatcatccac
agcatcttcagcctgatcctgaagttccgtgcccagctgatcgcacagccctgggacagc
catcagggggaggcagtgcaccccagcttcattgccatgcagcagtcgtacaataccttc
aagtattactctcacttccttttcaaagtggtgaccaagctggtgaacagaggctaccag
cctcatttagaggatttccttcttcgcatcaacttcaacaactactacaaagactcctga
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integrated database retrieval system
