Scomber japonicus (chub mackerel): 128358549
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Entry
128358549 CDS
T09718
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128358549 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128358549 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128358549 (samm50)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
128358549 (samm50)
Transporters [BR:
sjo02000
]
Other transporters
Pores ion channels [TC:
1
]
128358549 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
128358549
NCBI-ProteinID:
XP_053174852
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All DBs
Position
5:8456013..8463240
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AA seq
472 aa
AA seq
DB search
MGTVHARSLDPLPMQGPELGVHADDIEAPDIEQHPKQEVLENKDVVVQKVHIDGLGRTKE
DLLTYEIAEVFRAKNLIDVMRRSHEARQKLLRLGIFRKVEVVIDTSRGEDALPNGLDVTF
EVIELRRMTGSYNTMVGNNEGSMVLGVKLPNVLGRAEKMTFQFSYGTKETSYGLSFFKPQ
PGNFERNITLNAYNVTGQFPWSSLRETDRGISGEFSFPLWKTSQTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLSHAMVIDTRNSSIIPKKGGLLKIHQELAGYTGGDASFLKEDF
EIQLNKTLFWDSVLSASMWGGLLLPIGEKPTSIADRFYLGGPTSIRGFSMYSMGPQSEGM
TGDYLGGEAYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLKK
LAECIRWSYGLGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccacgcccggagcctggaccctctgcccatgcaagggcctgagctggga
gttcacgctgacgacatcgaggctcccgatatcgagcagcatccaaagcaagaagttctt
gaaaacaaggatgtcgtagtccaaaaagtgcacatagatgggctcgggagaaccaaagag
gacctgctgacctatgaaatcgcagaagttttccgggcaaaaaatttaattgatgtgatg
agaaggtcccatgaagcccgacagaagctgctacgtctcggtatcttcagaaaagttgaa
gttgttattgacacgtcccgaggtgaggatgctcttcccaacggcctcgacgtgaccttt
gaggtcatcgagctgagacggatgacgggcagctacaacactatggttggaaacaatgaa
ggaagcatggtactgggcgtgaagttacctaacgtattaggtcgggcagagaaaatgacc
ttccagttctcctacggcactaaagagacatcctacggcctgtccttcttcaaaccccaa
ccaggaaactttgaacgcaatatcacactcaacgcgtacaatgtaacaggacagtttcca
tggagttcactgagagagactgatcgaggcatctctggagagttcagcttccctctgtgg
aagaccagccaaaccctgaagtgggagggggtgtggcgagagctgggttgtctggctcgc
accgcctcttttgccgtccgggaggaaagtggtcattccctcaagtcttccctttcgcat
gccatggtcatcgacaccagaaactcctccattattcccaagaagggtggcctgttgaag
atccatcaggagctcgctggttacactggtggagatgccagtttcttgaaggaggacttt
gagatccagctgaacaaaacactcttctgggactcggtcctttctgcctcaatgtggggc
ggtttactcctgccaattggtgaaaagccgacaagcatagcagacaggttctacctgggc
ggccccaccagcatcagaggattcagtatgtacagtatgggcccacagagtgaaggtatg
acaggtgactacctgggaggagaggcctactgggctggaggcctccatctctatactcct
ctacccttcagaccaggcaaggggggctttggtgacctctttcgaacacacttcttcctc
aatgccggaaacctttgtaacctcaactatggggaggggccacgagcacatttaaagaaa
ctggcagagtgcatccgttggtcatatggactgggcatcgtattgcgtctgggtaacatt
gccaggctggagctgaattactgcattcccatgggagtccagagtggagacaggatatgt
gatggggtccagtttggagcaggaatcagattcctgtga
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