Scomber japonicus (chub mackerel): 128358664
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Entry
128358664 CDS
T09718
Symbol
phaf1
Name
(RefSeq) UPF0183 protein C16orf70 homolog
KO
K27411
phagosome assembly factor 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128358664 (phaf1)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Other autophagy associated proteins
Others
128358664 (phaf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
128358664
NCBI-ProteinID:
XP_053174986
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All DBs
Position
5:complement(28122548..28139363)
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AA seq
416 aa
AA seq
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MLDLEVVPERSLGNEQWEFALGMPLAQAISILQKHCRIIKNVQVLYSEQTPLSHDLILNL
TQDGIKLLFDATNQRLKVIEVYDLSKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NAAEQLFHLNFRGLSFSFQLDSWNEAPKYEIPHGAMVKRMHIYTGNNLQETRAPVMPLAC
FLGNIYAECVDVLRDRAGPLGLKLRLLTAGCGPGVMTDAKVRSLERSIYFGDSCQDVLGA
LGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDSTTHLVKKFVLHT
NFPGHYNFNIYHRCDFKIPLVIKKDGADSQTEDGILTTYSKWDQIQELLGHPMEKPVVLH
RSSSANNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGAPRTTSQVRPESSSSSH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctggaggtggtgcctgagagatcactaggaaatgaacaatgggaattcgcc
ttagggatgccattggcccaggccatctctattctgcaaaaacactgccgtatcatcaaa
aatgtccaggtgctatacagtgaacagacaccactcagccatgacctcatactgaacttg
actcaggatgggattaaactgctgtttgatgccacaaatcagagactcaaggtgattgaa
gtgtatgacctgagcaaagtcaagttgaaatactgtggagtccatttcaactctcaggcc
attgcccccacaatagagcaaatagaccagtcatttggagctacgcaccctggagtgtac
aatgcagcagagcagttgttccatctcaactttcgaggactgtccttctccttccaactg
gactcatggaacgaagccccgaagtacgagattccacatggggccatggtcaagaggatg
cacatctacactggcaacaacctgcaagaaacaagagccccggtgatgccactggcttgt
ttccttggcaacatctacgcagagtgcgtggatgtcctcagagatcgtgcagggcctctg
gggctcaaactgcgcctcctcactgctggttgtggtcccggtgtgatgactgacgctaaa
gtgagatccctggagaggagcatctactttggagattcctgtcaggatgtactgggtgct
ctgggctcgccacataaagtcttctacaagtctgaggacaagatgaagatccactctcca
tcaccacacaagcaggttccttcaaaatgtaacgactacttcttcaactacttcaccctc
ggagtggatatcctgtttgactcgacaactcacctggttaagaagtttgtcctccatacc
aacttccctggacattacaacttcaatatatatcatcgatgcgactttaagattccacta
gtcatcaaaaaagatggagctgattcccagacagaggacggcatattaaccacctacagc
aagtgggatcagattcaggaactgctgggtcacccaatggaaaaacctgtcgtgctccac
aggtcttcgtcagccaataacaccaacccctttggctctaccttctgctttggactgcag
aggatgatctttgaggtgatgcagaataaccacatagcatcagtgaccctctacggtgct
ccacggaccaccagtcaagtccgacctgagtccagtagcagttcccactga
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