Scomber japonicus (chub mackerel): 128358688
Help
Entry
128358688 CDS
T09718
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1 isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128358688 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128358688 (rasgrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
PH_11
MYO6_lever
IQ
ADIP
Motif
Other DBs
NCBI-GeneID:
128358688
NCBI-ProteinID:
XP_053175015
LinkDB
All DBs
Position
5:complement(17536015..17558350)
Genome browser
AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFALLQNMLFYFENESSS
RPSGLYLLEGCICDRAPSPKPSLSAKECLEKQYYFTVSFTQENQKALELRTEDVKDSDEW
VAAISHASYRNLANEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
LHKDNEKIHASPAATPTDDDSEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVVSLIDCTLMEDPEGTDDESKSDK
SGQDMEHLDFKIVVEPKDSQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFED
NSKVTVPQMIKSDSSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTIADVVLDKLITIYKKPISAIPARSLELFFASSQNSKLLYGEPPSSPRAS
RKFSSPPPLAIAKNSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSSMSPFSK
TTLDINKLYVSSPIASKIPDEGEDKKDKAEDTTACKQDLSVREESDNDQNQSDDADPEAS
PTKSPTTPKNIKCKNSSEFTVFSYNNGMVMSSCREMDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSPDFETNNELKT
KVIVFLEEVMHDPELLTQERKAAANIIRTLTQEDHGDNQITLEDVTQLVGTGKAEPFESH
SALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMRTTKHFNDISNLIATEI
LRCDDVVTRVVVIEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQTKA
VIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSK
MRMISHIIREIRQFQQTAYKLDLQPKVAHYLMDGSSALDEESMYEASLRIEPKVPN
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgacttaatgatggtcatgtcacctacttggggcttttggcaaaa
aaggatggtacaagacgagggtgcttgagcaaaaagagctcagacaacacaaaatggcac
acaaagtggtttgctttgttacaaaatatgctattttattttgagaacgagtccagttct
cgaccctccggattatacctgctggaaggatgcatatgcgacagggcgccttcaccgaaa
ccttcactgtcagccaaggagtgtttggaaaagcagtactatttcactgtcagctttacc
caagaaaaccaaaaggcgcttgagttacgcacagaagatgtaaaggacagcgatgaatgg
gtggctgccatatcacacgccagttacagaaacttggccaacgagcatgagactctcatg
cagaagtatcttcatctacttcagattgtggagacggaaaaaacagttgctaagcaactt
cgacaacagatagaagatggagaaatagagattgaaaggcttaagtcagagatctctggg
ctgcacaaagacaatgagaagatccacgccagcccagcagccaccccgactgatgatgac
tcagaaatcaagaaaatcaaaaaagtccagagcttcctgcgaggctggatctgcaggaga
aagtggaagaccatcatccaggattacatccgctcaccacatgctgagagcatgaggaag
aggaaccaggtggtgttcagcatgttggactcggaggctgagtacgtccagcagcttcac
attctggtgaacaacttcctgaggccgctccgcatggcagccagctccaagaagccaccc
atcacccatgatgacgtcagcagcatatttctcaacagtgaaactatcatgtttctacat
cagatattttaccaggggttaaaagccagaatagcaagctggccaacattagtgctggcc
gacctgttcgatatcctgctgcccatgctgaatatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatccttgctcactgcaagcagaaccgagactttgacaagctgctg
aagcagtatgaggccaaacccgactgcgaggagagaaccctggagaccttcctcacctac
cccatgttccagattccccgctacattcttacgctccacgaacttttggcccacacaccc
catgaacatgtagagagaaacagtctggactacgcaaaatctaagctggaggagctttcc
agaatcatgcatgacgaagtgagcgagactgagaacatcaggaagaacctggcgatagag
cgcatgattgtagagggctgcgagattctcctcgacaccagccagacgtttgtaagacaa
gggtctctcatccaggtgccgatgagtgagaagggcaagatcacccgtgggcgactgggc
tctctatctctgaagaaggagggggagaggcagtgctttctcttctccaagcatttaatc
atctgcaccaggggttctgggggaaagcttcatctcaccaagaatggagtagtctccctt
atagactgcactcttatggaggaccctgaggggacagatgatgagtccaaatcagacaag
agtggccaggacatggagcacctggacttcaagattgtcgttgagccaaaagacagccag
tcattcacagtcattttggtggcttcctcgaggcaggagaagtctgcatggaccagtgac
atcagccagtgcatagacaatattcgctgcaatgggttgatgatgaatgcctttgaagac
aactccaaagtcacagtaccacagatgatcaaatcagactcgagcctgtactgtgacgat
gtggacatccgcttcagtaagatgatgaactcctgcaaggtgctgcagatacgctacgcc
agcgtcgagcgcctgctggagagactgactgacctccgtttcctctccatcgacttcctt
aacaccttcctgcactcctatcgcgtgttcaccatcgctgatgtggtgctagacaaactc
atcaccatctacaagaagcccatcagtgccatccctgcacggtccctggagttattcttt
gccagcagtcagaacagtaaactcctttatggggagccacccagctcacctagggccagc
cgaaagttctcctcccctcctcctctggctatcgccaagaactcatccccaaaccgccgg
cgcaagctctccctcaacatccctatcatcactgggggcaaagctcttgacctggctgcc
ctcagctgctcctcaaatggctatgcaagcatgtactcctccatgtccccattcagcaag
accaccttagatatcaacaaactgtacgtgtccagccctatcgcgagcaaaataccagat
gagggagaggacaagaaggacaaggcggaagataccacagcgtgcaaacaagatctctca
gtacgagaagaaagtgacaatgatcaaaaccaaagtgatgatgcagatccagaagcctct
cctaccaagtcaccaacaaccccgaaaaacatcaaatgcaaaaactcctcagagttcacc
gtattttcctacaacaatggcatggtgatgtcctcatgtcgagagatggacaacaaccgc
agtgccctgtctgctgcctccgcctttgctattgctacagctggagccaatgaaggcacc
cctaccaaggaaaaatatcgaaggatgtccctcgccagcacaggattcccaaccgatcag
agaaatggagacaaagagtttgtgatcagacgagcggcgaccaacagagttctaaatgta
ttgaggcactgggtgtccaaacactctccggactttgaaactaataatgagctgaaaaca
aaggttattgtcttcctggaggaagtgatgcatgaccctgagctgttgacccaggagagg
aaagcagcagctaatatcatcaggactctaactcaggaagatcatggtgacaatcagatc
acccttgaagacgtgacacaactggtgggcacagggaaggccgagccctttgagagccac
tctgccttggagattgcagagcagctcacccttctggaccacctggtgtttaaggtcatc
ccatatgaggaattctttggacaaggctggatgaagaatgacaaaaatgagaagacgcca
tatatcatgagaacaacaaagcacttcaatgatataagcaacctcatcgccacagagatc
ctgcgctgtgatgatgtggtcactcgggtcgtggtcattgagaaatgggtagctgtggct
gacatctgccgctgtctccataattacaacgccgtgcttgagatcacctcctctctcaac
cgcagctcagtcttccgcctcaaaaagacctggctcaaggtttccaagcagacgaaggca
gtaattgacaagctgcagaagctggtctcatcagaggggaggttcaaaaacctgagagag
gctttgaaaaactgtgatcctccctgtgtgccctatttgggaatgtaccttactgacctg
gctttcattgaggagggaacacccaactacaccgaagacaacttggtcaacttctcaaag
atgagaatgatttctcacatcatcagagaaatcaggcagtttcagcaaacagcttacaag
cttgaccttcaaccaaaggtagcccattatctaatggacgggagctctgctctggatgaa
gaaagcatgtacgaagcctcgctcagaattgagcctaaagtgcccaactga
DBGET
integrated database retrieval system
