Scomber japonicus (chub mackerel): 128358705
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Entry
128358705 CDS
T09718
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4
KO
K09174
regulatory factor X 4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128358705 (rfx4)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Other basic domains
RF-X
128358705 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
128358705
NCBI-ProteinID:
XP_053175036
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All DBs
Position
5:complement(21123951..21141362)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNMSNDEHEEKENNRASKPHSTPA
TLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGKIIRQQFPALTTRRLG
TRGQSKYHYYGIAVKETSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSPTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSADITFQMLEDWRNVDLNSITK
QTLYTMEDSQEEHRQLIIHLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANDL
MRAMKGEGSTAEREEEFTLTETTPTSPSPASYSPARSVHSVGVSSASSPTAAVSPEYTGV
TATTGAVQSYTWSLTYTVTTAGGSTPEAGQQLSCMRSSAPVPPPSSTHRMPVYTHREEHG
YTGSYNYGSYANQHPHSIQSQYPSLAHEPAIPAPLHYSAYHRSSAQYQLNGQMSRMEPCL
MGSTPRLHPAPVAPRWPDVSPANSCYTSPPMHSSRYAASGDMYSPLGPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctaaatgagagcgagagcaagcgatactcgagtcacacgtctctggggaacatgtcc
aacgatgaacatgaagagaaagaaaacaacagagcctctaaaccacattcaacaccggct
actctggaatggctagaagagaactacgagatagccgaaggtgtgtgcattccccgaagt
gccctctacatgcattacctggacttcagtgaaaagcacgacacacagcctgtgaatgca
gccagctttggaaagattataaggcaacagtttccagcactgactaccagaagactgggg
acaagagggcagtccaagtaccactactacggcatagcagtgaaggagacctctcagtat
tatgacgtgatgtactccaaaaagggagcggcgtgggtgaacgagacggggaagaaagag
gtcacgaagcagacagtggcgtattcaccgcgctccaaactggggacgctcctgccagag
tttccaaatgtcaaagacctaaatttgcccgccagcctgccagaagagagggtgtcaacc
ttcatcatgatgtacagaacgcactgtcagaggatactggacacagtcatacgagccaac
tttgacgaggtccaaagtttcctgctgcacttctggcaaggcatgccgccccacatgctc
cctgtcctcggctcccctacggtggtgaacatagttggtgtgtgtgactccatcctctac
aaggccatctctggggtgctgatgcccaccgtcctgcaagcactgcctgatagtttgact
caggttattcgaaaatttgccaaacagcttgatgagtggcttaaaatagcacttcatgac
ctcccggaaaacctgaggaatatcaaatttgaattatcgaggagattctctcagattcta
aagcggcaaacctcattaaaccacctatgtcaggcatcgcgaactgtgataaacagcgct
gacatcacctttcaaatgctggaggactggaggaatgtggacctgaacagcatcaccaag
cagacactttacaccatggaggactcacaagaggagcacaggcagcttattatccacttg
tatcaggagtttgaccgtctacttgaggagcagtctccaatcgaggcttacatcgagtgg
ctggactccatggtggaccgctgtgtcgtcaaggtggcagggaagaggcccgggtgccta
aagaaggtggcccaacagttcctgctgatgtggtcgtgtttcggtaccagagtcatccgg
gatatgaccctccacagcgcacccagctttgggtccttccacctgatccatctcatgttt
gatgattatgttctttacctgctggagtccttgcactgccaggagagggccaacgacctt
atgagggccatgaagggcgagggcagcacagcagagagagaggaggaattcacgctgaca
gaaaccactcccacctccccatctccagcatcctactctccggctcggtcggtccattct
gtgggcgtttcctcggccagctcccccacagcagccgtgtccccggagtacacaggagtc
actgccaccacaggcgctgttcagtcatatacctggtcccttacatacacagtgacaaca
gcaggcggctccactccagaggccgggcagcagctgtcctgtatgaggagcagtgcacca
gtccctcctccatcctcaacccatcggatgccagtctacacccacagagaggagcatgga
tatactggcagctacaactacggcagctacgccaaccagcaccctcactccatccagagc
cagtacccaagtcttgcccatgagccggcaatcccagcccccctccactactccgcttac
caccgctcatctgcacagtaccagctcaatggtcagatgtcccgtatggagccttgcttg
atgggcagcactcctcgcttgcaccccgcacctgtcgccccccggtggccagatgtgtca
ccggctaacagctgttacaccagcccacctatgcattcatcccgctatgccgcttccggg
gacatgtactctcccctgggcccacgcaggaactcagagtatgaacactcacagcatttc
cctggctttgcctacatcaatggagaggccaccacaggatgggcaaaataa
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