Scomber japonicus (chub mackerel): 128358726
Help
Entry
128358726 CDS
T09718
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128358726 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128358726 (fanci)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
128358726 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
128358726
NCBI-ProteinID:
XP_053175067
LinkDB
All DBs
Position
5:21721596..21730798
Genome browser
AA seq
1328 aa
AA seq
DB search
MKTAVDKIVSLSDGDQTVELQKYLSSLTDDQLITVITNSALKGKKVGTTIKGIFKGSPST
STEGSNRRLLLYQHCIPLCESGDLQTEVAADIIGLLMLETHTLSGPSLAQLASLFVEAIK
MGKMGSGKSLELFPTVLTALAACEALSYGKGELSGDEYKKQLINSLCSSRWDPQCVIHLT
TMFRDVPLSSEELRFLVEKVLRMFSKLDLQEIPPLVYQLLLLSAKGCKKQVLDGIISYFK
EQDLRQEEEQKHGESLDLEVQSIPEDQLRHVEGTAILHIVFAIRLDHELGREFLKSFKVA
YTSYVDLCPFSVALLLSVARIQRYEEQVFELLKGAVIKSFKDEQLQQGSKFLQDLLPGHS
SIAQMILDTVKNSVFGWDHVTQGLVQLGFFLMDTFGPKPGPFGKTTEGSATVARTPTQLA
CKLGGQVLLQGFKMHEPIRGEILEQVLNRLVTKTASPVHHYLDLFSDIVVSAPMILLESS
TKVTETFDHLSYLPLATVQGLLKAVQPLLKVSMSLKDALILVLRKAMFSSQLDGRKSAVT
GFLLLLKNFRVLGSLASSQCSQAVSSSQVQVDVHSRYNSAANEAFCLEILSSLRRCLGQQ
ADVRLMLYEGFYDVLRRNSQLASSIMQTLFSQLKRYYEPEQDLLPPVKLEPCITAHGEQV
YLQEPLAHLLSCTVHCLLWLQNMRRSANPNADDSDDEEEEEEEGYQSELQTILDSMTRRM
IKSELEDFELDKSAEFSMGSSVGVKNNIYAVLVMGVYEVLMEYNFIKANYRKSHFEELIE
LFTHYHKLSEILKEKSGKGRVPSSKTPRSLLSLSFVSTLLTVLFRDSTQSREDALSVLRS
SGEFVRYAVNVAVQKIQQLEETGHTDGPDGQNADKTFSFLCDMTSVLMWRYTNIPSVVED
AGKKEKRCSLSLLCLEGLLRIFTACQQRYPDKMAQLLSTMEISEDDAEPDDGNVTEINFF
YIRQFQRALFTQLNRREEEFNSKEAQLLVSILSVLSRQLKPSSQQFVQMITWTVKICKET
SFEDSAFCKGLLSLLFNLHVLYKTPVSLFLELCRDIHSQLGDIDQDVEVEKQCHFAIVNM
KTATTATLLVLSQIDKVLDEVDWLITRKKSQVASEKSGSEEATQTAGQQDPVEKAVTLQL
GTLLTALNELVQTALLPGTCTITLLRELSRTYTILTTLVKYYIQVCASQHGALPARVEKL
VKLSGSHLTPQCYLFITYAQNGEFSGGGADDKKKKKRGEVNSAKLLRDTKAIPNLIFSIE
QYEKYLITLSKKSKVNLMQYMKLSTSRDFRINAATLDAALQEQDDSQETTESQDAEETQE
PKQKKRKQ
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgcagtggataaaatcgtctcactgtcagatggagaccaaactgttgaactt
caaaagtacctgtcctcccttacagatgaccagcttattactgttattaccaacagtgca
ctaaagggtaagaaggttggtaccacgattaaaggcatttttaaaggctctccatctact
tccactgaagggtcaaaccgcaggctgctgctgtatcaacactgcatccccctgtgtgag
tctggtgacctccagactgaagtagcagctgatatcattggactgttgatgctggagact
cacacactgtctggaccatctcttgcacaactagcatctctttttgttgaagccattaag
atgggaaaaatgggaagtgggaaatccctggagctatttcctactgtgcttactgctctg
gcagcctgtgaagccttgtcgtatggcaaaggggaactcagtggtgatgaatacaagaaa
cagctgatcaacagcctctgctcaagcagatgggatccacagtgtgttatccacctgaca
accatgttcagagatgtgcctctgtcatcagaggagctgcgtttcctggtggagaaagta
ctgcgcatgtttagcaaactagatctgcaagagatcccgccacttgtttaccagctgctg
ttgttatcagcaaagggttgtaagaaacaggtcctggatggaatcatcagttattttaag
gagcaggaccttcgccaggaagaggagcagaaacatggagagagcctggatctagaggtt
cagtctattccagaggaccagctaaggcacgtagagggcactgctatcctccacatagtc
tttgctataagactcgaccatgaacttgggagagaattccttaaaagcttcaaggttgcc
tatacatcttatgtggacttgtgccctttcagcgtcgccctgttgctctcggtggcacgt
atccagcgctatgaagaacaggtgtttgagcttttgaagggcgcagtcataaagagcttc
aaggatgagcagctacaacaggggtcaaagttcctgcaggacctcctgccgggacacagt
agcatcgctcagatgatactggacacagtgaagaacagtgtgtttggttgggatcatgtg
acccaggggctggtgcagctgggcttcttcctcatggatacatttggacccaaacctgga
ccgtttggcaaaaccacagaagggtccgctactgtagccaggacccccactcagctggca
tgtaaactgggaggtcaagtgctcttgcagggattcaagatgcacgagcctatccgaggc
gagatactggagcaagttctgaatcgactggtcacaaagacagcctcacctgtccaccat
tacttagatcttttctctgatattgtggtctctgctcccatgatcctcctggagtcatcc
acaaaggtgacagagacatttgaccacctgtcttacctgccgttggccactgttcagggc
ttactgaaagcagtccagcccctgctcaaagtcagtatgtccttaaaagatgcattgatt
ctagttctccgaaaggccatgttttccagccaactggatggaaggaaatctgcagtgact
ggcttcttgttgctgctgaagaacttcagagtgttgggcagcttggcctcgagccagtgt
agccaggcagtctcctccagccaggtccaagtggatgttcattctcgttacaactctgct
gccaatgaagcgttctgtctggaaatcctcagcagcctgcgccgctgtctgggccagcag
gctgatgtacgccttatgctctatgagggtttctatgatgttctccgtcgtaattcccaa
ctggcaagctccatcatgcagacccttttctcacagctaaagcgatactacgaacctgaa
caagacctcctgcctcccgtgaaactggagccatgcatcactgctcacggagagcaagtc
tacctccaggagccactggcccatctgctgagctgtactgtgcattgcctgctgtggctt
caaaacatgcgccggtcagcaaatcccaatgctgatgacagcgatgatgaggaggaggag
gaggaggagggataccagtctgaactccagacaatcctagacagcatgacaagacgcatg
atcaagagtgaactggaagactttgaactggacaagtcagcagagttctccatgggatct
agtgttggggtaaagaacaatatctatgctgtgctggtgatgggagtgtatgaggtcctt
atggagtacaatttcatcaaagccaattacagaaaaagccactttgaggagttaattgag
ctgttcacccactaccacaagctgtctgagatcctgaaggagaaatctggaaagggtcga
gtgccctcgagtaaaacccctcgcagtttactctctctgagctttgtatcaactcttctc
actgtgctcttcagagacagtactcagagcagagaggatgctctctcagtgctgcgttca
agtggagaatttgtacgttatgcagtaaatgtggctgtgcagaagatccagcagctggag
gaaactggacacacagacgggccagatggacagaacgcagacaagactttcagtttcctc
tgtgacatgacgagtgtcctgatgtggcgctacaccaacatccccagtgtggtggaggat
gcagggaagaaggagaagcggtgcagtctgtccctgctgtgtctggaaggtctgctccgg
atcttcacagcctgccagcagcgctacccagacaagatggcccagctcctctctaccatg
gagatctccgaggacgatgctgagccagatgatggaaatgtcacagagatcaacttcttt
tacatcagacagtttcagagggcgctgttcactcagctaaacagaagagaggaggaattt
aacagcaaagaggctcagctgttggtcagcattttgagtgtgctctcacgccagctaaag
ccatcttcccaacagtttgttcagatgatcacatggactgtgaaaatctgcaaggagacc
agttttgaggactctgctttctgtaaggggctgctatcacttctcttcaacctgcatgtt
ctctataagacccccgtgagcctgttcctggaactctgccgagacatccacagccaactg
ggagatattgatcaagatgtggaggttgaaaaacagtgtcactttgccatagtcaacatg
aagactgcaacaacagcaacgctgttggtcctgtctcagatcgataaggtgcttgatgaa
gtggactggctgattaccagaaagaaaagtcaggtggcctctgagaaatcgggctctgaa
gaggccacacagactgcaggccagcaggatccagtggagaaagcagtgacactgcagctt
gggacccttttgacagctttaaacgagctggtccaaacagccctgctgcctggcacctgc
accattacactgctgagagagctgagtcgcacatacaccatcctcaccaccttggtcaaa
tattacatccaggtttgtgccagccagcatggtgcactaccggcacgtgttgagaagctg
gtcaagctgtctggctcccacctaacaccgcagtgctacctgttcatcacatacgcacag
aatggagaattcagtggaggaggtgcagatgacaagaagaaaaagaaaaggggtgaagtg
aactctgcaaaacttctgcgtgacacaaaggccattcctaacttaatcttcagtattgaa
cagtatgagaaatacctcatcacactgtcaaagaaatctaaggtaaatctgatgcagtac
atgaagttgagcacgtcaagagatttccgcatcaacgctgctactctggatgcagcctta
caggagcaggatgacagtcaagagaccacagaatcacaggatgcagaggaaacgcaagaa
cccaaacagaagaagagaaaacaatga
DBGET
integrated database retrieval system