Scomber japonicus (chub mackerel): 128358764
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Entry
128358764 CDS
T09718
Name
(RefSeq) F-box/LRR-repeat protein 14-like
KO
K10280
F-box and leucine-rich repeat protein 14
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128358764
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128358764
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
LRR_Zer-1
LRR_RPS2
LRR_At1g61320_AtMIF1
F-box
LRR_At5g56370
LRR_R13L1-DRL21
LRR_EndoS
LRR_14
LRR_8
SAM_Ste50p
Antiterm
Motif
Other DBs
NCBI-GeneID:
128358764
NCBI-ProteinID:
XP_053175123
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Position
5:20732940..20735468
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AA seq
403 aa
AA seq
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MFEMETHISCLFPEILAIIFSYLDVKDKGRVAQVCAAWRDASYHKSVWRGVEAKLHLRRA
NPSLFPSLQIRGIKKVQILSLRRSLSYVIQGMPHIESLNLCGCFNLTDNGLGHAFVQDIP
SLRVLNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLVAWGLHRLKSLNLR
SCRHVSDVGIGHLSGMTRSAAEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSF
CGGISDAGMIHLSHMTHLCSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKIGDQSL
AYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQ
LTGIDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTESERVR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatggagacgcatatatcgtgccttttcccagagatcctggccattattttc
agttatctggacgttaaagacaaaggaagagtagcccaagtgtgcgcggcctggagggac
gcgtcctaccacaagtctgtgtggaggggggtggaagccaagctgcacctgcggagagct
aacccgtccctgttccccagcctgcagatcagaggcatcaaaaaagtccagatccttagc
ctgaggcgaagtctgagctacgtgattcaagggatgccgcacatcgaaagccttaacctg
tgtgggtgtttcaacctcacagacaacggactcggacatgcctttgtgcaggacatcccg
tcgctgcgggtgctgaatctcagcctttgcaaacagatcactgactccagtctgggcagg
attgcacagtacctcaaaaacttggaggtgcttgaacttgggggatgcagcaacatcacc
aacaccggcctgttgctggtcgcctggggcttgcacagactcaagagccttaacctgcgc
agctgcaggcatgtgtcagatgtgggcatcggtcacctgtctggcatgacccgcagcgct
gcggagggttgcctgtctctggagaagctgaccttgcaggactgccagaagctgactgac
ctttctctcaaacatgtctcaaagggcctaaacaaactcaaagtgctcaacctcagtttc
tgcggggggatatcggatgcagggatgatccacctgtcgcacatgacccacctgtgcagc
ctgaacctgcgatcctgtgataacatcagtgacacggggataatgcatctggccatgggc
tccctccggctctctggtcttgatgtctccttctgtgataagatcggggaccagagtctg
gcatacatcgcccagggactgtatcagctcaagtccctctctctttgctcctgccatatc
agtgatgatggcattaacaggatggtacgacagatgcacgaactaaagactctcaacatt
ggacagtgtgtacgaatcacggacaagggtttggagctgatagctgaccatctgacccag
ctgacagggattgatctgtacggttgtacaaagatcacaaagaggggtctggaaaggata
acacagctcccgtgccttaaagtgttaaacctgggactgtggcagatgactgagagtgag
agagtgaggtga
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