Scomber japonicus (chub mackerel): 128358791
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Entry
128358791 CDS
T09718
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128358791
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Other basic domains
RF-X
128358791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
128358791
NCBI-ProteinID:
XP_053175152
LinkDB
All DBs
Position
5:complement(11730316..11740360)
Genome browser
AA seq
1390 aa
AA seq
DB search
MSSSRTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNV
FPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLDLQKSGDGCELMEASGQSPSAEDE
MRSAACGLVCEWAQKVLSRQFDHVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTP
ASAFVPTAEANSFQPQVKTLPSPSVDAKQQLQRKIQKKQQEQKLHSPLPIEAQVKRTEAS
TPGPTIPCGSPALLSPQPTIGIVVAAVPSPVTVQRSRQLMTSPSPVGTAEGKVLPVNFQV
VTQSLKQSPKAPQNISASPVGDRLARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIK
TVMPTNHVSSVNVVKMTAIALAPSSSTTTVRPASAGLSTIAASDDLQHLPSVSSAAIHSP
AIRPSAPASTLSLSLSTDTKVVSEAGNDNNPTAGAEKTAVGAKEDRVAKFRAASEPSFLV
KCSPGPDKAARVKNDPTSPPTSIAVAGTQDSNNSNCHDSTLYLTVDNQNSNGNTSSSGPS
TLTPTSKDPCTDAKSPRKRTVPAGESHVIPVKRVFISQQPLAVIDNPKPGVSAAVKRIPR
PGTPARPESAPCKVTVKHTSIGPTQILALSDSPITHTDGSQTVVKPQALVVKHEGHSLST
DTSTGAAGNNTSDQALLQQITGDPRAIPANSGAHEASVMSDLKSTIWEEGQLDELRKQAF
AQQIPAEHKQTPTDQLSIIAQPTETSGQLTLTQEMVDFAGSQPNMDYFPFNDDDMTQDSI
VEELVQMEEQMKLKGLFSSCVDVSLQGQSANNQGSILNAHQAGTAFYHSAHSSTTPVQTP
TPTPTPTPTPTPTSEMTLGHSMTRESPCSRMAPITPVDGAMGRHTPISTPLSNCSSSVPP
SPVECRNPFAFTPINSSITGYHDASIVSSSPVKPMQRPMATHPDKAKLEWINNRYNSTSG
GPLSNHSIGILPSYQDLVDDQFRKPHAFAIPGQSFQAQPRQDGAHFGRLTPISPVQQQQQ
QQLVTGVTTPTKQESFAVPAPLDNKASTSSASSTFRCRSVSPAVRQRNFSGNTGPPTTTT
NTTTTTRAVVSPFNSPITSEVLSILSNSQTVSSVHSMVQRSQSVPLNIMMQSEMLPVQGP
SNTAKITNVLLSKMEADGDDSVRGLGINNLPSNYTARMNLTQILETTPGFAGGTPHQTQL
PVSSSPAAFELQQHGYLTTGSGETVTFSTGDSQAQAGTGEQDQQQPQQLQENPVQTQPQL
LLQSTQQQEVEDEQQQLDFNNTVKDLLGDDGLNPSSQLVGQVASELNAVASDFSNDIRLT
SDLSSSITDLNTLDTNLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDTVNSGFDWLESK
DQPTTVEMLG
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaagccgtactcaacagatgtatgcattcaactggatacgaaatcacctagag
gagcatccagagacttccctcccaaagcaagaggtgtatgatgaatacaagagctattgt
gacaatcttggctataatccactgagtgcagcagactttggaaagatcatgaagaatgtc
tttcctaacatgaaggcacgtcgactgggcatgaggggcaaatccaaatactgttatagc
gggttaaggaagaaagcttttgttcacatgccgtccttacccaacctggatctgcagaaa
tccggtgatgggtgtgagctgatggaggcgtcaggccagtctccgagcgccgaagatgaa
atgcgatctgcagcctgcggtctggtgtgtgagtgggcccagaaggtcctgagtcgtcag
tttgaccacgtggaggatctggcgcgctttctgctcaatagtcactacattggtactaag
tccatggctgcactcactgttatgacgggaacacccacaggaatgaagacaccaactcca
gcctcagcgttcgtgcccactgctgaggcaaactctttccagccccaggtgaagaccctg
ccctctccctctgttgatgcaaagcagcaactgcagcgcaagatccagaagaagcagcag
gagcagaagctccactcacccttacccattgaggcccaggtcaagagaacggaggccagt
actcccggtcctaccatcccctgtggaagccctgctctgctctcccctcagcccaccata
ggcattgtagtagcagctgttcccagccctgtcacggtacagagaagcaggcagttaatg
acctcgcccagccctgtggggacagcagaggggaaagtgttgcctgtgaacttccaagtg
gtgactcagtctcttaaacagtcccccaaagctccccagaatatctcagctagtcctgtg
ggtgaccggctggcacgacacggtacccggtacgctcagatcctgcccaagccctctgcc
accagtgccatcacgctgcgctcaccccccaccctgctcatcaccaacagccccataaaa
actgtgatgcctactaaccacgtcagctcagtcaatgtggtgaagatgacggccatcgct
ctggctccaagcagcagcaccacgaccgtgagacctgcctcggcgggtttgagtaccatt
gccgcttcagacgatttacagcatttacccagtgtgagctcagctgccattcattctcct
gcaatcagacccagcgctccagcctccaccctttccctttccctctccactgacaccaaa
gtggtgtcagaagctggaaatgacaataaccccaccgctggcgcagagaaaactgctgtc
ggggccaaagaggacagagtggctaagttcagggctgccagtgagccaagcttcctggtc
aagtgttctccgggaccagacaaagcagcaagggtaaaaaatgatcccacatcccctccc
acgtcaatagctgtagctgggactcaggacagcaataacagtaactgccatgacagtact
ttgtacttgactgttgataatcagaactccaatggcaacacatcatccagtggcccctcc
actcttaccccaacatcgaaagatccctgcacagatgccaagagccccaggaagcgcaca
gtccctgccggggagtcccatgtgattcctgtgaagagggtgtttatctcccagcagcca
ctggctgtaattgacaatcccaaacccggagtcagtgctgcagtgaagaggatccctcga
ccgggaactcccgccagaccagagagtgccccctgcaaagtgactgtgaaacacacctcc
atagggcccacacagatccttgcactctctgactcacccatcacacacactgacggctcc
cagactgttgtcaaaccccaggccttggtagtgaaacacgaaggccactccctcagcact
gacaccagcactggagcagctggaaacaacacatccgatcaggcgctgctacagcagatc
actggagaccctcgtgccataccagccaactcaggagcacacgaagcctctgtgatgagt
gacttaaagagcacaatatgggaggagggacagcttgatgagcttcggaagcaggcgttt
gctcagcagataccagctgaacacaaacaaacccctacagaccaactttccattatagct
caacccactgagacctcaggccaactcaccctcacacaggagatggttgactttgcaggt
tctcaacccaacatggactacttcccattcaatgatgacgacatgacccaagacagcatc
gtagaggagcttgtccaaatggaggagcagatgaagctgaagggtctgtttagtagttgc
gttgacgtgtctctacaaggccagtcagccaacaatcaaggctctatcctcaacgctcac
caggccggcactgccttctaccactctgcccacagcagcaccactcccgtccaaactccc
actccaacaccgacaccaaccccgacacccacccccacctctgaaatgacacttgggcac
agcatgacaagagagagcccctgttctcgcatggctcccatcactcctgtggatggagcc
atgggtcgccacacccccatcagtacgccactgtccaactgcagcagcagcgtccccccg
agcccggtggagtgcaggaacccttttgcgttcactcccattaactcgagcatcacaggt
tatcatgacgccagtattgtctccagcagccctgtcaagcccatgcaaaggcccatggca
acgcaccctgacaaggccaaactggagtggatcaacaaccgctataacagcacctctgga
ggtcctttgtccaaccatagcatcggtattctgcccagctatcaagacttggtagatgac
cagtttcgcaagccacatgcatttgcaattcccggccagtcatttcaggctcagccgaga
caggatggcgctcactttggccgtttgacgcccatttctccggtgcagcagcagcagcag
cagcagcttgtaacaggtgtgactactcccactaaacaggagagctttgctgtgcctgca
ccattagacaacaaggcttcaacgtcatccgcatccagtactttccgttgccgcagtgtt
agccctgcagtgcgccagaggaacttcagtggtaacaccggccctccaacaaccaccact
aacaccaccaccaccacccgagccgtcgtctcgccctttaactcccccatcacctctgag
gtgctcagcatcctttctaacagccagacggtcagctctgtccacagcatggtccagcgt
agccagtctgtacctctgaacatcatgatgcagagtgaaatgctgcctgtgcagggtccg
agtaacaccgccaaaatcaccaatgttcttctcagtaagatggaggctgacggggatgac
tctgtccgtggcctggggataaacaacctcccctctaactacacggcccgtatgaacctc
acacagatcctggagacaactcctggcttcgctggaggaactccccaccagactcagctg
cctgtcagctctagccctgctgcctttgagctccagcagcatggctacctcaccactggc
agtggagaaactgtgaccttctccactggggacagccaagcacaagcgggtactggtgag
caagaccagcagcaaccgcagcagctccaggagaatcctgtgcagacacaaccgcagctc
ctcctccagagcacacagcagcaggaggtggaggacgagcagcaacagctggatttcaac
aacactgtcaaggacttgttgggggacgatggcctcaaccccagctcccagttggtcggt
caggtagcttcggagctcaacgctgtggcatccgacttctcgaacgacatcagactgacc
tcagatctgtccagtagcatcactgaccttaacacattggacaccaatctgctgtttgat
ccaaatcaacagcaggaacaatatgaagactcgacactggaagaactgaaaaacgacccg
ctttttcagcagatatgcagtgatactgtgaactctggttttgactggttagaaagcaaa
gaccagcctactacagtggagatgctgggctaa
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