Scomber japonicus (chub mackerel): 128358823
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Entry
128358823 CDS
T09718
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03020
RNA polymerase
sjo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128358823 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
128358823 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128358823 (polr2c)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128358823 (polr2c)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128358823 (polr2c)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128358823 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
128358823
NCBI-ProteinID:
XP_053175192
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All DBs
Position
5:26158283..26162189
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AA seq
275 aa
AA seq
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MPYANQPTVKITELSDENVKFMIENTDLAVANSIRRVFMSEVATIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYTEIEEDEVQAPYEPNGKPERFYYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccgacggtgaaaatcacagaactgtcagacgaaaatgtgaag
tttatgattgaaaacactgatttggcggttgcaaactctatacgtcgtgtcttcatgtca
gaagttgccactatagcgattgactggatccagatcgatgccaattcatcagtattgcat
gatgagttcattgcacacagagtgggtctcatacccctcactagcgatgacattgtggac
aaaatgcagtattccagggactgtacctgtgatgatttctgtccagagtgttctgtcgag
ctgacgctggatgtccgatgcactgaagaccagacacgccatgtcacctcacgtgacctg
ttgtccaacaacccccgagtcatccctgtgacttccaggagtagagacaatgatcccaat
gactacgttgaacaagatgacattttgctggtgaagcttcgtaaaggacaggaactgcga
ctcagagcttacgccaagaaaggctttggcaaagagcatgccaagtggaacccaacagcg
ggggtgtcattcgagtacgacccagacaacgcactccggcacacagtttacccaagacct
gaggaatggccaaagagtgaatacacagagattgaagaagatgaggttcaagctccctat
gagcccaatggaaaaccagaaaggttctattacaacgtggagtcttgcggttctctacga
ccggagaccatcgtcatgtctgcgctggccgtcctcaagaagaagctgagcgacctgcag
acacagctgagccacgagatccaaagcgacgtgctcaccatcaactga
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