Scomber japonicus (chub mackerel): 128358855
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Entry
128358855 CDS
T09718
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128358855 (lingo1a)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128358855 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
Ig_C17orf99
LRRCT
Motif
Other DBs
NCBI-GeneID:
128358855
NCBI-ProteinID:
XP_053175224
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Position
5:9943488..9945353
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AA seq
615 aa
AA seq
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MAAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETQLLDLSKNRIRTINPDEFANFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRHLNINVIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALN
DNPLACDCRLLWVFRRRWRLNFNKQQPTCASPEFVQGKEFKDFPDALKNNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggaagcgactgggcacagctacctggtggcttgctggcagcccattctg
atcctgatgctgggcactgtgctgtctggctcaactacaggctgcccatcccgctgcgag
tgcaacgttcaagagcgctctgtgatgtgccaccgcaaaaagctcatgacagttcctgag
gggattcccgcagaaacacaactgctggacctcagcaagaaccgcattagaaccatcaac
ccagacgagtttgccaacttccccaacctcgagcacctggagctcagtgagaacacaatc
tccactatcgaacccggtgcattcaacaacctttacggcttgcggacattggggcttcgt
agcaacaagcttaagctgatccagcttggtgttttcacaggtctgagcaatctcacacag
ctggacataagtgagaacaagattgtcatcctgttggactacatgttccaggatttgtac
aacctccgttctttagaggtgggtgataacgacctggttttcatctcccaccgggctttt
catggcctaagtagccttgagcacctgagtcttgagaagtgtaacctgtcctctgtgcca
acagaggcttttactcacctccacagtttgattactctcaggctgcgtcacctcaatatc
aatgtcatacgggattactcctttaaacgtctctatcggctgaaggtgctggaaattgcc
aattggccatatttggatacgatgaccccaaattgcttgtatggattaaatctcacttcc
ctgaccattgcaaatgctaacttgaccacaattccttatgtggccttgcggcacttggtc
tatttgcgctttctcaacctgtcctataaccccattcacaccattgaggggaataagctt
catgacctacttcgtcttcaggaatttcacctggtaggaggaagactggcaatgattgag
ccctactctttccgcggtcttaactacctgaagattctaaatgtgtctgggaactctctt
agcactttagaggagtctgctttccattcagttggcaacctggaaaccctagccttgaat
gataatcccctggcctgtgactgccgactgttatgggttttccgacgacgctggagactg
aacttcaacaagcagcagcccacctgtgcctcccctgagtttgttcaaggcaaagaattt
aaagacttcccagatgctctgaaaaataattatttcacgtgccgcaagtccaggataagg
gatcgcaaaccgcagcagaaatttgttgacgagggagccattgttcattttgcttgccag
gcagatggagatcctgctccagtgataatgtggctctccccacagaaaaagtttatcacc
accaaaacaatcgggaggctctccgtgttgccagacggtactcttgaggtgcgctatgcc
cagattcaagacaatggtacatatgtgtgtatagctagcaatgcaggcggaaatgatacc
tctcttgctcacctgcatattcatagctactcccctgactggccacaccagcccaacaag
acttttgccttcatctccaaccagcctacagaaactggtgctaatggtacaagagccaat
gtcccttttccctttgatataaagacgctgatcattgcgaccacaatgggtttcatctct
tttctcggtgtcgtcttgttttgcttggtgctactcttcctttggagcagaggaaaaggc
aacactaagcacaatattgaaattgagtatgtgccacggaaatcggacgctggcatgagc
agcagcacagtggatgctcctcgcaagttcaacatgaagatgatttaa
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