Scomber japonicus (chub mackerel): 128358896
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Entry
128358896 CDS
T09718
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128358896 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128358896 (lamb4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
128358896
NCBI-ProteinID:
XP_053175269
LinkDB
All DBs
Position
5:complement(55325..89474)
Genome browser
AA seq
1811 aa
AA seq
DB search
MIFILIFIGLLPAAQLQQDQQDQQDQQDQCPRGSCNPQLGDLMVGRAPQLSASSTCGLHG
PNNYCILGYLEEEQKCFTCDSRLPYDRHSNPDSHRIENAITTFDPERKMKWWQSENGVHQ
VSIQLDLETVFQFSHLVLSFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCSLHFPTASRR
PADGIEHVVCDSRYSGSEPSSDGEVVLKALDPIFEIENPYAPEIQELITITNIRINFTRL
FTLGDTLLGRRRRNPQDKYYYALYNMVVRGSCFCNGHASQCMPLDGGRGDVYTQAGMVHG
RCVCQHDTAGENCERCRDFHHDAPWRPGGEGHVCRSCDCNGHSDSCHFDAARFEASGGRS
GGVCDGCRHDRVGPHCERCRPFLFQDPRRAPQDPDACIPCDCDAGGSEGGGLCDPLSGQC
VCKGNVEGQRCDRCKHGFFGLRHEDPAGCQKCTCHALGSLGSCDQLTGRCECDRLASGEQ
CDRCVAGFWGLGDSGFRCSPCDCDVGGSRSNACSPHGGQCTCLPNMAGRRCTEPTAGHFL
PPLDYFLYEAELAAALHDGNSAAALAGLPAAVSRDWVIQRDPTVPPDCVQYYRERGFGFQ
LSKGRVVLIRRTRRARLRRQTLQPGRIPLEPGHALQIIPRQRTPGQSVTWSGLGLVRVLD
GAGLRFTVDNLPSSMEYRLVIRYEPETPSDWLASVSVITLSPGDGGCSSDPTGSKTLILP
GNTRGGVLDSPLCLNAAARYLVDVSFNVQSGPEASHILIDSMGLIPIIESIRDFCSQSEL
DSFRRFRCVGLTVELDSQESLPEVCEGLIGSMSARIHNGAVPCRCNVIGSLGPSCSKVGG
LCECKPNVIGRCCDTCAPQTFGFGPDGCKPCQCDPRGSVSELCDQVRGQCACRSGVTGRH
CGRCQAGFWGFPHCRPCECNGLSDVCDEQSGECQTCREHATGPRCDRCVEGYYGNPASRQ
PCQPCLCPDIQGSGRFFASSCNQNPQSLGLTCNCWEGHKGPQCNRCSPGFYGDLTLTGSR
CEECPCNNNIDPDERDACDSVTGKCLHCLHNTMGPNCQNCKPGYYGNALEQDCKECSCDR
RGTEVTRCPLGSPCFCDQATGQCPCRTGAMGVLCDECEDGYWNLDGASGCQPCSCDPANS
FSNICNKVSGQCPCRPEFGGRQCDECGENHFGNPDLQCISCDCNMEGTVRPSCDPETGEC
MCRTGVTGIFCDECAPGYDSAFPACKECHPCTTLWAQNVTDVQRAAQRMRTFIPRQGDNQ
PGHNRHRQRMLEMHSKLEGLTNLTALSPPKVDKMAKLYQKIGKLKDSIDPNVILINPTSL
LNTEIDNIHHEFKKLLNNLKEKLMGLPDDDDGDDEDLQELLDEIQKLHKDFLSDEKRVKN
ANEALEDSMDTREEVKHKLSKCSSRGDLAPLEKSVKALSVVSLNRKICGEPGVGQEDCSG
CGGALCRLPLGNRKCGGPNCDGIVPLGEKASDTADNAKEKLIMLSGKLQESKNKINDAQQ
VAQDTKALTKNLQDRINNNMDTWERDKNKTKELIQRVRDYLLDEMVPPEDIEKMARAVLD
IQLPRSPDEIRSMINNINDLLSNAANFQEDMKKLEQQAKTAQDLLQKALELKEQTKNIDM
NKISQDIYEAEKAQSKANDDLETASGDKDMAKDRLREITDKLDDDEKKLMSPRPKQLLDN
IEALKRKTEQNREQAKEAKEAADAATGSSKDAETELDKVRKLFEVLKQQKGNESVQDEAG
KRLKNIVEEVEMLRRQVEDKQRLIEDVEKNINQLIRRKQEKVAEVAELLKEVDSLRQDIS
KRAEGYINCSS
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcatcctcatcttcatcggtcttcttccagcagcccagctccagcaggaccag
caggaccagcaggaccagcaggaccagtgtcctcgcggctcctgtaatccgcagctcggt
gacctcatggtgggtcgggcccctcagctctcagcctcctccacctgcggcctgcatgga
cccaataattactgcatcctcggatacttagaggaggagcagaagtgcttcacgtgtgac
tctcggctgccgtacgatcgccatagcaaccccgacagccaccgcatcgagaacgccatc
acgacctttgaccccgagcgtaaaatgaagtggtggcagtctgagaacggagtccaccag
gtcagcatccagctggatctggagaccgtgttccagttcagccatctggtcctcagcttc
aagagcttccgcccggcggccatgttggtggagcgctcgaaggacttcgggagaacgtgg
aaagtgttccgatacttcgcggaagattgttcgcttcatttcccgacggcgtcgcgtcgg
ccggccgacggcatcgaacacgtggtctgtgacagccggtactcggggtccgagccctcg
tctgacggagaggtggtgctaaaagctttggatccaatctttgaaatagagaatccgtac
gcaccagagatccaagagctgatcaccatcaccaacatccggatcaacttcacccgcctc
ttcacgctgggcgacactctgctgggccgccgccgcaggaacccgcaggacaaatattac
tacgccctttacaacatggtggtgcgaggaagctgcttctgcaacggccacgccagccag
tgcatgcccctggacggagggcggggggacgtctacacccaggccggcatggtccacggc
cgatgcgtctgtcagcacgacacggccggagagaactgtgagcgctgtcgagactttcac
cacgacgccccctggaggcccggaggggaaggacacgtctgcaggagttgtgactgtaac
ggtcactctgactcgtgccacttcgacgcggctcggttcgaggcgtcgggggggcggagc
ggcggcgtgtgtgacggctgccgccacgaccgggtcggacctcactgtgagcgctgtcgg
ccgttcctgttccaggacccccggcgggccccccaggaccccgacgcctgcataccgtgt
gactgtgatgcgggggggtcagagggggggggtctctgtgaccctctgagcggtcagtgt
gtctgtaaaggaaacgtcgaggggcaacgatgcgaccgctgcaaacacggattctttggt
ctgagacacgaagacccggccggctgccagaagtgcacgtgtcacgctttgggaagtttg
gggtcatgtgatcagctgacaggaagatgtgaatgtgaccgactggcgagcggagagcag
tgtgaccgatgtgtggcagggttctggggtctgggggactcggggttcaggtgttctccg
tgtgactgcgatgtcggaggatcccgaagcaacgcgtgttctcctcatggcggtcagtgc
acctgtctgcccaacatggccggtcggcgctgcaccgaacccaccgccggccacttcctg
ccgccgctggactacttcctgtatgaggcggagctcgctgccgcgctgcatgatgggaac
tctgctgctgctctggcgggacttcctgcagccgtgtccagggattgggtcatacagcgg
gacccgaccgtcccaccggactgcgtgcagtattacagagaacgaggattcggcttccag
ctctctaagggtcgagtggttctgatccggaggactcggcgggcccgcctcaggaggcag
actctgcagccgggccggatcccgctggaaccgggtcacgccctgcagatcatcccccgc
cagaggacgcccggccagtccgtcacatggagcggcctgggattggtcagagtcctggat
ggggcggggcttaggttcactgtagacaaccttccttcctccatggagtaccggctggtg
atccgctacgagcccgagactccatctgattggttggcatcagtcagcgtcatcacgctg
tcgcccggcgatggcggctgcagcagcgacccgacaggaagtaaaactctgattctcccc
ggaaacaccagaggcggcgttctggactctccgctgtgtctgaacgcggcggctcgatac
ttggtggacgtctcgtttaacgttcagtccggacccgaagcctcgcacatcctcatcgac
tcgatgggtttgattcccatcatcgaatccatccgtgacttctgctcccagagcgagctc
gactctttccgacgcttccgctgcgtcggattaaccgtcgaactcgactcgcaggagtcg
ctgccggaagtctgtgaaggtctaatcgggagcatgtcggcccggatccacaacggagct
gttccctgcaggtgtaacgtgattggctctctcggaccgtcctgcagtaaagtgggcggg
ttgtgtgaatgtaaacccaacgtgattggccgttgctgtgatacctgtgcgccacagact
tttggatttggacctgacggctgcaaaccgtgtcagtgcgacccccgcggctcagtgtca
gagctctgtgatcaggtcagaggtcagtgtgcgtgtcgctcaggggtgaccggtcggcac
tgtggacgctgtcaggcgggattctggggtttccctcactgccgaccctgcgagtgcaac
ggcctgtccgacgtctgcgatgaacagagcggagagtgccagacctgcagagagcacgcc
accggacctcgctgtgacaggtgtgtggagggttactatggtaacccagcctccagacag
ccctgtcagccatgcctgtgtccagacattcagggcagcggacgattcttcgcctcttcc
tgcaaccaaaacccacaatcccttggtctgacctgcaactgctgggaggggcacaaaggt
ccacagtgcaacagatgcagtcctggtttctatggcgacctgacgttgacgggttcccgc
tgtgaagagtgtccgtgcaacaacaacatcgacccagacgagcgagacgcctgcgacagt
gtgaccggaaaatgtctgcactgtctccacaacacgatgggaccaaactgccaaaactgc
aaaccgggttactatggcaacgccctagagcaagactgcaaagaatgctcctgtgaccgg
cgggggacagaggtgactcggtgtcctctggggagtccctgtttctgtgatcaggcgacc
ggacagtgcccctgcaggacaggtgcgatgggcgtcctctgtgacgagtgtgaggacgga
tactggaacctggacggagcgtcaggctgtcagccttgcagctgtgatcctgcaaactct
ttctccaacatctgcaacaaggtgtcgggacagtgtccctgccgtcctgagttcggagga
agacagtgtgatgaatgtggagaaaatcattttgggaaccctgacctgcagtgcatctct
tgtgactgcaacatggagggaaccgtgcgcccgtcatgtgaccctgaaacgggcgagtgc
atgtgtcggaccggtgtcaccggtatcttctgtgatgagtgcgctcctggctacgactca
gcgttccccgcctgtaaggagtgtcacccctgcacgaccctctgggcccaaaacgttacc
gacgtgcagcgagcggctcagaggatgagaaccttcattcctcgccagggtgacaatcag
cccggacataatcgccaccggcaaaggatgctggagatgcactctaagctggaaggtctc
accaacctgacggcactttccccgccgaaggtggacaagatggcaaaactgtatcagaag
atcgggaagctgaaagacagtatcgaccccaacgtgatcctcatcaacccgacctcactg
ctcaacactgaaatagacaacattcatcacgagttcaagaagctgctaaacaacctgaag
gagaagctcatggggctgcccgatgatgatgatggcgatgatgaagacctgcaggaactg
ctggatgagatccagaagcttcacaaagacttcctgtctgatgagaagagagtgaagaat
gctaacgaagctctggaggactccatggacaccagagaggaggtcaaacacaaactgagc
aagtgcagcagcagaggagacctggcgcctctggagaagtcggtcaaagcgctgagtgtg
gtcagcctcaaccgtaagatctgtggagaaccaggagtaggacaggaggactgttcagga
tgtggtggcgctctctgtcgtctgcctctgggaaacaggaagtgtggcggtccaaactgt
gatggcatcgttcctctgggtgaaaaagcttcagacacggcagataacgccaaggagaaa
ctcatcatgctctctggcaaactgcaggagtccaagaacaagatcaatgacgcccaacag
gtggctcaggacactaaagctctgaccaaaaacctccaagatcggatcaacaacaacatg
gacacctgggagagagacaagaacaaaaccaaggagctcattcagcgtgtcagagactac
ctgctggatgagatggttcctcctgaggatattgagaaaatggcccgagcagtgctggac
atccagttaccacgatcacctgatgagattcgatccatgatcaataacatcaatgatctg
ctgtccaatgccgccaacttccaggaggacatgaagaagctggaacagcaggccaagacg
gcccaggacttgctgcagaaagccctggagctcaaggaacagacgaagaacattgatatg
aacaagatcagccaagatatttatgaagcagagaaagctcagagcaaagccaacgacgac
ctggagacagccagtggagacaaggacatggccaaagaccgactccgagaaattacagac
aaactggacgatgatgagaagaagcttatgagccctcgacccaaacagctgttggacaac
atagaagcgctcaaaaggaaaactgaacagaacagagaacaagctaaagaggccaaagag
gctgcagacgcagctacaggcagcagtaaagatgcagagacggagctggacaaggtgaga
aagctgtttgaggttttaaagcagcaaaaagggaacgagtcagttcaggacgaagctgga
aaacgtctgaagaacatcgtggaggaggtcgagatgctgaggcggcaagtggaggacaaa
cagcgactcatagaagacgtggagaagaacatcaaccagctgatcagacgtaaacaggag
aaagtcgctgaagtggccgaactcttaaaggaagtggattctcttcgccaggacatctcg
aaacgggctgaaggatacatcaactgctcctcttaa
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integrated database retrieval system