KEGG   Scomber japonicus (chub mackerel): 128358896
Entry
128358896         CDS       T09718                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04510  Focal adhesion
sjo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128358896 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128358896 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMININ_IV_B LAMB1 LAMB4 F5_F8_type_C
Other DBs
NCBI-GeneID: 128358896
NCBI-ProteinID: XP_053175269
LinkDB
Position
5:complement(55325..89474)
AA seq 1811 aa
MIFILIFIGLLPAAQLQQDQQDQQDQQDQCPRGSCNPQLGDLMVGRAPQLSASSTCGLHG
PNNYCILGYLEEEQKCFTCDSRLPYDRHSNPDSHRIENAITTFDPERKMKWWQSENGVHQ
VSIQLDLETVFQFSHLVLSFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCSLHFPTASRR
PADGIEHVVCDSRYSGSEPSSDGEVVLKALDPIFEIENPYAPEIQELITITNIRINFTRL
FTLGDTLLGRRRRNPQDKYYYALYNMVVRGSCFCNGHASQCMPLDGGRGDVYTQAGMVHG
RCVCQHDTAGENCERCRDFHHDAPWRPGGEGHVCRSCDCNGHSDSCHFDAARFEASGGRS
GGVCDGCRHDRVGPHCERCRPFLFQDPRRAPQDPDACIPCDCDAGGSEGGGLCDPLSGQC
VCKGNVEGQRCDRCKHGFFGLRHEDPAGCQKCTCHALGSLGSCDQLTGRCECDRLASGEQ
CDRCVAGFWGLGDSGFRCSPCDCDVGGSRSNACSPHGGQCTCLPNMAGRRCTEPTAGHFL
PPLDYFLYEAELAAALHDGNSAAALAGLPAAVSRDWVIQRDPTVPPDCVQYYRERGFGFQ
LSKGRVVLIRRTRRARLRRQTLQPGRIPLEPGHALQIIPRQRTPGQSVTWSGLGLVRVLD
GAGLRFTVDNLPSSMEYRLVIRYEPETPSDWLASVSVITLSPGDGGCSSDPTGSKTLILP
GNTRGGVLDSPLCLNAAARYLVDVSFNVQSGPEASHILIDSMGLIPIIESIRDFCSQSEL
DSFRRFRCVGLTVELDSQESLPEVCEGLIGSMSARIHNGAVPCRCNVIGSLGPSCSKVGG
LCECKPNVIGRCCDTCAPQTFGFGPDGCKPCQCDPRGSVSELCDQVRGQCACRSGVTGRH
CGRCQAGFWGFPHCRPCECNGLSDVCDEQSGECQTCREHATGPRCDRCVEGYYGNPASRQ
PCQPCLCPDIQGSGRFFASSCNQNPQSLGLTCNCWEGHKGPQCNRCSPGFYGDLTLTGSR
CEECPCNNNIDPDERDACDSVTGKCLHCLHNTMGPNCQNCKPGYYGNALEQDCKECSCDR
RGTEVTRCPLGSPCFCDQATGQCPCRTGAMGVLCDECEDGYWNLDGASGCQPCSCDPANS
FSNICNKVSGQCPCRPEFGGRQCDECGENHFGNPDLQCISCDCNMEGTVRPSCDPETGEC
MCRTGVTGIFCDECAPGYDSAFPACKECHPCTTLWAQNVTDVQRAAQRMRTFIPRQGDNQ
PGHNRHRQRMLEMHSKLEGLTNLTALSPPKVDKMAKLYQKIGKLKDSIDPNVILINPTSL
LNTEIDNIHHEFKKLLNNLKEKLMGLPDDDDGDDEDLQELLDEIQKLHKDFLSDEKRVKN
ANEALEDSMDTREEVKHKLSKCSSRGDLAPLEKSVKALSVVSLNRKICGEPGVGQEDCSG
CGGALCRLPLGNRKCGGPNCDGIVPLGEKASDTADNAKEKLIMLSGKLQESKNKINDAQQ
VAQDTKALTKNLQDRINNNMDTWERDKNKTKELIQRVRDYLLDEMVPPEDIEKMARAVLD
IQLPRSPDEIRSMINNINDLLSNAANFQEDMKKLEQQAKTAQDLLQKALELKEQTKNIDM
NKISQDIYEAEKAQSKANDDLETASGDKDMAKDRLREITDKLDDDEKKLMSPRPKQLLDN
IEALKRKTEQNREQAKEAKEAADAATGSSKDAETELDKVRKLFEVLKQQKGNESVQDEAG
KRLKNIVEEVEMLRRQVEDKQRLIEDVEKNINQLIRRKQEKVAEVAELLKEVDSLRQDIS
KRAEGYINCSS
NT seq 5436 nt   +upstreamnt  +downstreamnt
atgatcttcatcctcatcttcatcggtcttcttccagcagcccagctccagcaggaccag
caggaccagcaggaccagcaggaccagtgtcctcgcggctcctgtaatccgcagctcggt
gacctcatggtgggtcgggcccctcagctctcagcctcctccacctgcggcctgcatgga
cccaataattactgcatcctcggatacttagaggaggagcagaagtgcttcacgtgtgac
tctcggctgccgtacgatcgccatagcaaccccgacagccaccgcatcgagaacgccatc
acgacctttgaccccgagcgtaaaatgaagtggtggcagtctgagaacggagtccaccag
gtcagcatccagctggatctggagaccgtgttccagttcagccatctggtcctcagcttc
aagagcttccgcccggcggccatgttggtggagcgctcgaaggacttcgggagaacgtgg
aaagtgttccgatacttcgcggaagattgttcgcttcatttcccgacggcgtcgcgtcgg
ccggccgacggcatcgaacacgtggtctgtgacagccggtactcggggtccgagccctcg
tctgacggagaggtggtgctaaaagctttggatccaatctttgaaatagagaatccgtac
gcaccagagatccaagagctgatcaccatcaccaacatccggatcaacttcacccgcctc
ttcacgctgggcgacactctgctgggccgccgccgcaggaacccgcaggacaaatattac
tacgccctttacaacatggtggtgcgaggaagctgcttctgcaacggccacgccagccag
tgcatgcccctggacggagggcggggggacgtctacacccaggccggcatggtccacggc
cgatgcgtctgtcagcacgacacggccggagagaactgtgagcgctgtcgagactttcac
cacgacgccccctggaggcccggaggggaaggacacgtctgcaggagttgtgactgtaac
ggtcactctgactcgtgccacttcgacgcggctcggttcgaggcgtcgggggggcggagc
ggcggcgtgtgtgacggctgccgccacgaccgggtcggacctcactgtgagcgctgtcgg
ccgttcctgttccaggacccccggcgggccccccaggaccccgacgcctgcataccgtgt
gactgtgatgcgggggggtcagagggggggggtctctgtgaccctctgagcggtcagtgt
gtctgtaaaggaaacgtcgaggggcaacgatgcgaccgctgcaaacacggattctttggt
ctgagacacgaagacccggccggctgccagaagtgcacgtgtcacgctttgggaagtttg
gggtcatgtgatcagctgacaggaagatgtgaatgtgaccgactggcgagcggagagcag
tgtgaccgatgtgtggcagggttctggggtctgggggactcggggttcaggtgttctccg
tgtgactgcgatgtcggaggatcccgaagcaacgcgtgttctcctcatggcggtcagtgc
acctgtctgcccaacatggccggtcggcgctgcaccgaacccaccgccggccacttcctg
ccgccgctggactacttcctgtatgaggcggagctcgctgccgcgctgcatgatgggaac
tctgctgctgctctggcgggacttcctgcagccgtgtccagggattgggtcatacagcgg
gacccgaccgtcccaccggactgcgtgcagtattacagagaacgaggattcggcttccag
ctctctaagggtcgagtggttctgatccggaggactcggcgggcccgcctcaggaggcag
actctgcagccgggccggatcccgctggaaccgggtcacgccctgcagatcatcccccgc
cagaggacgcccggccagtccgtcacatggagcggcctgggattggtcagagtcctggat
ggggcggggcttaggttcactgtagacaaccttccttcctccatggagtaccggctggtg
atccgctacgagcccgagactccatctgattggttggcatcagtcagcgtcatcacgctg
tcgcccggcgatggcggctgcagcagcgacccgacaggaagtaaaactctgattctcccc
ggaaacaccagaggcggcgttctggactctccgctgtgtctgaacgcggcggctcgatac
ttggtggacgtctcgtttaacgttcagtccggacccgaagcctcgcacatcctcatcgac
tcgatgggtttgattcccatcatcgaatccatccgtgacttctgctcccagagcgagctc
gactctttccgacgcttccgctgcgtcggattaaccgtcgaactcgactcgcaggagtcg
ctgccggaagtctgtgaaggtctaatcgggagcatgtcggcccggatccacaacggagct
gttccctgcaggtgtaacgtgattggctctctcggaccgtcctgcagtaaagtgggcggg
ttgtgtgaatgtaaacccaacgtgattggccgttgctgtgatacctgtgcgccacagact
tttggatttggacctgacggctgcaaaccgtgtcagtgcgacccccgcggctcagtgtca
gagctctgtgatcaggtcagaggtcagtgtgcgtgtcgctcaggggtgaccggtcggcac
tgtggacgctgtcaggcgggattctggggtttccctcactgccgaccctgcgagtgcaac
ggcctgtccgacgtctgcgatgaacagagcggagagtgccagacctgcagagagcacgcc
accggacctcgctgtgacaggtgtgtggagggttactatggtaacccagcctccagacag
ccctgtcagccatgcctgtgtccagacattcagggcagcggacgattcttcgcctcttcc
tgcaaccaaaacccacaatcccttggtctgacctgcaactgctgggaggggcacaaaggt
ccacagtgcaacagatgcagtcctggtttctatggcgacctgacgttgacgggttcccgc
tgtgaagagtgtccgtgcaacaacaacatcgacccagacgagcgagacgcctgcgacagt
gtgaccggaaaatgtctgcactgtctccacaacacgatgggaccaaactgccaaaactgc
aaaccgggttactatggcaacgccctagagcaagactgcaaagaatgctcctgtgaccgg
cgggggacagaggtgactcggtgtcctctggggagtccctgtttctgtgatcaggcgacc
ggacagtgcccctgcaggacaggtgcgatgggcgtcctctgtgacgagtgtgaggacgga
tactggaacctggacggagcgtcaggctgtcagccttgcagctgtgatcctgcaaactct
ttctccaacatctgcaacaaggtgtcgggacagtgtccctgccgtcctgagttcggagga
agacagtgtgatgaatgtggagaaaatcattttgggaaccctgacctgcagtgcatctct
tgtgactgcaacatggagggaaccgtgcgcccgtcatgtgaccctgaaacgggcgagtgc
atgtgtcggaccggtgtcaccggtatcttctgtgatgagtgcgctcctggctacgactca
gcgttccccgcctgtaaggagtgtcacccctgcacgaccctctgggcccaaaacgttacc
gacgtgcagcgagcggctcagaggatgagaaccttcattcctcgccagggtgacaatcag
cccggacataatcgccaccggcaaaggatgctggagatgcactctaagctggaaggtctc
accaacctgacggcactttccccgccgaaggtggacaagatggcaaaactgtatcagaag
atcgggaagctgaaagacagtatcgaccccaacgtgatcctcatcaacccgacctcactg
ctcaacactgaaatagacaacattcatcacgagttcaagaagctgctaaacaacctgaag
gagaagctcatggggctgcccgatgatgatgatggcgatgatgaagacctgcaggaactg
ctggatgagatccagaagcttcacaaagacttcctgtctgatgagaagagagtgaagaat
gctaacgaagctctggaggactccatggacaccagagaggaggtcaaacacaaactgagc
aagtgcagcagcagaggagacctggcgcctctggagaagtcggtcaaagcgctgagtgtg
gtcagcctcaaccgtaagatctgtggagaaccaggagtaggacaggaggactgttcagga
tgtggtggcgctctctgtcgtctgcctctgggaaacaggaagtgtggcggtccaaactgt
gatggcatcgttcctctgggtgaaaaagcttcagacacggcagataacgccaaggagaaa
ctcatcatgctctctggcaaactgcaggagtccaagaacaagatcaatgacgcccaacag
gtggctcaggacactaaagctctgaccaaaaacctccaagatcggatcaacaacaacatg
gacacctgggagagagacaagaacaaaaccaaggagctcattcagcgtgtcagagactac
ctgctggatgagatggttcctcctgaggatattgagaaaatggcccgagcagtgctggac
atccagttaccacgatcacctgatgagattcgatccatgatcaataacatcaatgatctg
ctgtccaatgccgccaacttccaggaggacatgaagaagctggaacagcaggccaagacg
gcccaggacttgctgcagaaagccctggagctcaaggaacagacgaagaacattgatatg
aacaagatcagccaagatatttatgaagcagagaaagctcagagcaaagccaacgacgac
ctggagacagccagtggagacaaggacatggccaaagaccgactccgagaaattacagac
aaactggacgatgatgagaagaagcttatgagccctcgacccaaacagctgttggacaac
atagaagcgctcaaaaggaaaactgaacagaacagagaacaagctaaagaggccaaagag
gctgcagacgcagctacaggcagcagtaaagatgcagagacggagctggacaaggtgaga
aagctgtttgaggttttaaagcagcaaaaagggaacgagtcagttcaggacgaagctgga
aaacgtctgaagaacatcgtggaggaggtcgagatgctgaggcggcaagtggaggacaaa
cagcgactcatagaagacgtggagaagaacatcaaccagctgatcagacgtaaacaggag
aaagtcgctgaagtggccgaactcttaaaggaagtggattctcttcgccaggacatctcg
aaacgggctgaaggatacatcaactgctcctcttaa

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