Scomber japonicus (chub mackerel): 128359017
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Entry
128359017 CDS
T09718
Symbol
nup205
Name
(RefSeq) nuclear pore complex protein Nup205
KO
K14310
nuclear pore complex protein Nup205
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128359017 (nup205)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128359017 (nup205)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128359017 (nup205)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128359017 (nup205)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128359017 (nup205)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
128359017
NCBI-ProteinID:
XP_053175406
LinkDB
All DBs
Position
5:complement(25737557..25753687)
Genome browser
AA seq
1992 aa
AA seq
DB search
MAAQMAVNSGASLWGPLKELWETVDGAVLRRQPESVHLLDLQLKKHKPHFLSLFKNPPKS
AEQREKVRKASTEGIAIQGQQGSRLLPEQLLSEAFILSDLFDIGELAALELLLAGEHQQP
HFPGLTRGLVAVLLYWDGRLCVANSLRTLIQSRHGKTFTLDLSGELVALTTRFTDELVSQ
GLTKRILTLVSEISVTREFERLQKERGLGNEKHRKEVSDLIKECRQALADSLFSWTCQSP
LTKDDTLALIGHLETVTAQADGSLDSVNLALVMALLYCLDVSFIEQGTEDREDLLQALPL
LTERQYVSAVHSRLMDGQPWKLPGLQAVCRLAWALSLRVLSQLPQGSALVEFTEADEALA
DQALLGDVFLFMKEGILACENFAHEEFFIRRLHSLITDFLALMPMKVKQLRNRADEDARL
VHMSLQMDSELPSSLRKDLDHLMNLIGEFYSKDPFGLELGLEFWCPTESLQHTSLQGSYL
GMALQRPPHKQVVLSKFVRQMGDLLPSTLYIPYLRMLKGLANGPQCAHYCFSLLKTNGAT
HSDNIQGVSGSPVSWEHFFHSLMLYHENLRRDLPNPDAAQYRHPPLRGITQRELEGLTSF
LQLLTAIITWSENARLALCEHPQWTPVVVMLGLLQCSVPPVLKAELLLCLAAFGKSPEIA
ASLWQSLEYTQILQTVRAPGQRQAAGIEVELNEIESSCEEYPLTRGFCHLISTLVESSLP
VNLGAGLRVPGFQPYLNFLRDSVFLAFPTRAYRHPAEKWEVADSVLEVFHKLLRDYEPQP
SDFVQEMVELQGEQVQAHKPPGHSIMFHLLNDSPMLALCLSLLEEGVRQLDTYAPFPGKK
HLESAVLHCLCLLDLALQKEVVFMDLLRESQSSLLVSPLEQLLQGVSPQTRRADHIVNIA
RYLYHSSSNPEAAFQSAKILRRIANYPNIQTRLVGDFTHDQTVSNKLMAGFVECLDNEEA
EEGTEKGDDSDAQKKVARIRHETQIHILNLLITSLELKTPNLALYLLGYEVKKPVSSTNL
QDPGVLGCPRSCLHAILSLLQRGTEKRSGPVLTQQAPHLAELCYQVIYQLCACSDTSGPT
MRYLRTSQDFLFSHLRHLPYILPSNQIAALSQMSWLMKTAAIELRVTSLNRQRSHTQRLV
SLLLDDQPHTQHTADGESGMEEETRSVSGFLHFDTVSKVRRKLLSVLDAIEFSQDMPELL
QLDFFERTQIEQVISNCEHVNEQGHTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEV
NSILQQVVERNRVRRSLSAKRHALQSWRSLVETLLTACPADLIPPEDRQLIIRDLLLDLH
DKVLSEDAAGELMPIVAGAVFTLTAHLSQSVLSEQQQGVGLETSSGFASIANSALHLILR
KLLDFILCTGGGYQRLRAHLYGSLLYYLQIAQKPEEPDTLQTAGKAMWERLTAPEDGFSK
LQRENLAIIESYGKALMEVVCRDACDGHEISRMLALAVLDRILSIDRQNQWLVYVCNSGY
LRSLVESLRQDDTALQSLLTPQPPLLKPLYIYESKMALLTRVAKTGQGAVELLRCGLVAQ
LIECQVFDMVPDSDAHRVMRDPSGFIPSPMDRYRQILLPTLRLFQVILTSTTMNHQQGAA
QVLQWLIVHADTIQSLLRCQELSMGALQELSLLTGIISKTALPGTLEMGGEVNSAALMEF
QGHINRFQRLCLSLLGRLAGSERERLLKQAEIAAPGESAEREEMEVAMQQVCANIMEYCQ
TLLLQSSAQAQFSICLFSPSGSEPAGRDGGRADLLSTLPSMAHSRAPSLGLVLYLLKNSA
ADFFRFHQSHRQSLGKLQSLDQLPPEELKELCQGLVSGPGGVEKISSVQRSLLAKRRLVQ
LINNRAKLLALCSYVIETCLFVLWRHLEYYLLHCTPTDPKDSLLPGASLYRSRLTDDSFG
GLQSSASRGLGLSRVSQQDLDLLKSDMGAGFGEALQRKLLEVEGLYSQVRSRYTFIQALV
RRIRGLLRQAKS
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagatggcggtaaattcgggagccagtctgtgggggccactgaaggagctg
tgggagacagtggacggtgctgtgttgaggaggcagccagagagcgtccacctcctcgac
ctgcagctgaagaaacacaaaccgcattttctgtcactctttaagaacccgcctaagagt
gcagagcagagagagaaggtgcgtaaagccagcacagaaggcatcgccatccaaggtcag
caggggtcacgtctccttccagagcagcttctttcagaggccttcatcctcagtgatctg
tttgatattggagagctggcagctttggaacttctgttggcaggtgaacaccagcagccc
cattttccaggtctgacacgaggactagtggctgtgctcctctactgggatgggagactt
tgtgtagccaactctctgcgcacgctaatccagtcacgccacggaaagaccttcaccctt
gatctgagtggggagctggtggctttgacaacacgttttacagatgaactggtgagccag
ggtctgacgaaacgcatccttaccctggtgtcagagattagtgtgacgcgggagtttgaa
cggctgcagaaggagcgaggcctcggaaatgaaaagcacaggaaagaggtttctgacctc
atcaaagaatgtcgacaggccctggcagacagtctgttttcatggacttgccaatcacct
ttgactaaagatgacaccttggctctcattggccacctggagacagtgacagctcaagct
gacggctcattggacagtgtgaacctggctcttgtcatggcgctgctctactgcttggat
gtcagcttcatagagcaggggactgaagatagagaagatctgctgcaggcgctgcccctg
ctgacagagaggcagtatgtgtctgcggtgcacagtcgtctgatggacggacagccatgg
aagcttccaggtctgcaggctgtgtgtcggctagcctgggctctgtctctgagggtcctt
tcacagctaccacaaggctctgccctggttgagttcactgaggcagatgaggctctggct
gaccaggctctactgggagacgtcttcctgtttatgaaggagggcattctggcatgtgag
aattttgcacacgaagagttttttatccgccgccttcattcactcatcaccgacttcctg
gcactaatgccaatgaaggtgaagcaactacgtaaccgtgcggatgaggatgcccgtctg
gtgcacatgtccctacagatggacagtgagcttccatcgtcactgcgcaaggatttagac
cacctcatgaaccttataggagagttttacagtaaggacccatttgggttggagctgggt
ctggagttctggtgtcccacagagtcactccagcatacctccttgcagggatcctatctg
ggaatggcactgcaaaggcctccacataaacaggtggtgttgtccaagtttgtacgtcag
atgggagaccttctgccttccaccctctatataccctatctccgtatgctaaaaggtctc
gccaatggtcctcagtgtgcccactactgcttcagcctgctcaaaaccaatggagccaca
cacagtgacaacatccagggagtatcaggcagcccggtgtcctgggaacacttctttcac
tcccttatgctctaccatgaaaacctgcgaagagatcttccaaatccagatgcagcacag
taccgccacccaccactgaggggcatcacccaaagagagttggaagggctcacctcattt
ttgcagttactcactgccattattacatggagtgaaaatgctagactggcattgtgcgag
catcctcagtggacccccgtcgtagtgatgttggggctgctacagtgcagcgtcccgccc
gtcctgaaggctgagcttctgctctgcctggcagcctttggaaagtcaccagagatcgct
gcttctctctggcagtcactggagtacactcagatccttcagacagtgcgagccccaggg
cagaggcaggcagctggaattgaggtggagctgaatgagatcgagtcgagctgtgaggag
tacccgctgacacgaggcttctgtcacctgatcagcacgttggtggagagcagtctgcct
gttaatttgggtgcaggactgcgcgtgccaggcttccagccctacctcaactttttgcgt
gactctgtgttcctcgccttccccacgagagcgtatcgtcatccagctgagaagtgggag
gttgctgactcggtcctggaagtgttccacaagctgctgcgagactacgagccgcagccg
tcagactttgtccaggagatggtggagctgcagggcgagcaggtccaagcccacaagccc
cccgggcacagcatcatgttccatctgctcaacgactcgcccatgctggcgctctgcctc
agcctgctggaggagggtgtgcgccagctggacacttatgcacccttccctggtaagaag
cacttggagtcggcggtgctgcactgcctgtgcctgctggacttggctctgcagaaggaa
gtggtgttcatggatctcctcagagagagccagtcctccctgctggtttccccattagag
cagctcctacagggggtcagtcctcaaacccgcagggctgatcacatcgtcaatattgcc
aggtatctgtaccacagcagctccaacccagaagctgccttccagagtgccaagatcctg
cgtcgtatcgctaactaccccaacatccagactagactggtgggagatttcacacacgac
cagacggtgagtaacaagctgatggcaggcttcgtggagtgtctggacaacgaagaagca
gaggaaggaacagagaaaggagatgactcagacgcacaaaagaaagtggcaagaatacga
cacgaaacccagattcacatcttgaaccttctcatcacctctttggagctgaagacgccc
aatctggccctgtatctcctgggctacgaagtcaagaagcctgtgtcctcaaccaacctc
caggatccaggtgtgttgggatgtccacggagctgcctgcacgccatcctgagtctgctg
cagagaggcacagagaagcgatctggacctgtactcacacagcaggccccacacctcgct
gagctctgctatcaggtgatctaccagctgtgtgcctgctcagacacatctggacccacc
atgcgctatttgaggaccagccaggacttcctgttctctcacctgcggcacttaccctac
atcctgcccagtaaccagatcgcagccctatcacagatgtcttggctcatgaaaacggct
gcaatcgagctgagggtgacctcgctgaaccgccagcgttcacacacacaacgccttgtc
agtcttctgctggatgaccaaccacacactcagcatacagcagatggagaatcaggaatg
gaggaagagaccagatcagtcagtggtttcctgcactttgacacagtttctaaagtgcgc
aggaagttgctgagtgtgctggatgccatcgagttcagtcaggatatgccagagctgctg
cagttagacttcttcgagcgcactcaaatagagcaggtgatctccaactgtgagcatgtc
aacgagcaaggacacactgtgtgcaatgttaagttgcttcacagagtgctggttgctgag
gtaaatgcactgcaaggaatggcagccattggacagagacccctgttaatggaggaggtg
aactccatcctgcagcaggtggtggaacgtaaccgtgtccgtcggagtctgagtgcaaaa
cgacacgcactgcaatcctggaggagcctggtagagacgctgctgaccgcctgccctgct
gatctcatacctcctgaagacagacagctcatcatcagagacctgctgctagacctgcat
gataaggtattatctgaggatgcagcaggagaactgatgcccattgttgctggagcagtc
ttcactctcactgcccacctcagccagtcagtgctgtctgagcagcagcaaggggtggga
ttagaaacatcttctggcttcgcctcaatcgccaactctgccctacacctgatcctccgc
aagctgctggacttcatcctttgtactggaggtggataccagcgtctgcgtgctcacttg
tacggctctctgttgtattaccttcaaatcgcccagaaacctgaagaaccagacactctg
cagacagctgggaaggcaatgtgggagcgtctcacagctcccgaagacggtttttccaaa
ctgcagagagagaacctcgccatcatcgagagctatggcaaagccctcatggaggtggtg
tgcagggacgcctgcgacggccatgaaattagcaggatgttagctctagccgtgctggac
cgaatcctgtccatagaccgtcagaatcagtggctggtgtacgtctgcaacagcggctac
ctgcggtcattagtggaaagcctgagacaggatgacaccgccctgcagagcctgcttacg
cctcagccccctcttctcaaaccactctacatctatgagagcaaaatggctctactgact
cgtgtggctaagacgggccagggagctgtggagctgctgcgctgtggcctggtggcacag
ctgatagagtgccaggtgtttgacatggtgcctgacagcgatgcacacagagtgatgagg
gacccatctggcttcatcccaagccctatggaccgctacaggcagattcttttaccgacc
ctgaggctcttccaggtgatcctgacctccaccactatgaatcaccagcagggggcagca
caggttcttcagtggctgatagtccatgcagacaccattcagtccctgttgcgctgtcag
gagctcagtatgggagctttgcaggagctctctttgcttactggcatcatcagtaagaca
gctctgccaggtacccttgagatgggcggagaggtgaacagtgcggctcttatggagttc
caaggtcacatcaatagattccagcgtctgtgtctgtccctgctcggtcgtctggcaggc
agtgagcgggagaggttgctaaagcaggctgagattgctgcacctggagagtcagcagaa
cgagaggagatggaagttgccatgcaacaggtgtgtgctaacatcatggaatactgccaa
acgttgctgctgcagagctcagctcaggctcagttcagcatctgtctcttcagcccctct
ggcagtgagccagctggcagggatggaggccgtgcagatctcttgtcaaccctgccatca
atggctcactctcgggcccccagcctgggcctggtcctatacctgctcaagaatagtgct
gctgatttcttccggttccaccagagtcacagacagagcctgggcaagctgcagagcctg
gatcagctgcctcctgaggagctcaaggagttgtgccaaggcctggtttcaggcccagga
ggggtggagaaaatctcatcagtccagaggagcttgctggccaagagacgactggtccag
ctgatcaacaacagagccaagctgctggccctgtgctcctatgttatcgagacttgcttg
tttgttttgtggcgccacctggagtactacctgttgcattgtacccccactgaccccaag
gactccctgctacctggagccagtttatatagatcacgcctgacagatgactcatttggt
ggtttgcagtcgagtgcaagtcgtggactcggtctctcccgagttagtcagcaagatcta
gacctgctgaagagtgacatgggtgcaggtttcggggaggctctgcagcggaagcttttg
gaggtggaaggcttatacagccaagtccgctccaggtacaccttcatccaggctctggtc
cgcagaatcagaggcctgctgcgacaagccaaaagctga
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integrated database retrieval system
