Scomber japonicus (chub mackerel): 128359039
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Entry
128359039 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase beta-like
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128359039
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128359039
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128359039
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128359039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
PTP_tm
Ig_ILCR1
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Glyco_hydro_66
Motif
Other DBs
NCBI-GeneID:
128359039
NCBI-ProteinID:
XP_053175430
LinkDB
All DBs
Position
5:complement(4885771..4944233)
Genome browser
AA seq
2102 aa
AA seq
DB search
MPKAPNTTPTDPTTTPIEAPTTRPVTTSVTTTTAPTTPETPTMTTTQTITTPTPAITTPT
PAITTPTPAITTPTPIITTPTPAITTPTPIITTPTPIITTPTPAITTPTPAITTPTPAIT
TPTPIITTPTPAITTPTTTKSVTTTIQTTEATTPTTTTSTTTTTATTTTTLPPTTTTPTT
LPTTTPELTTTTPVQTTEAARCSANFTQISADSYSAVVTLSTSALLCNFTLFTEEEKIQA
DGADCEPHGELSHSFTCHITDLAPGTLYRLVVISKKDGEKSNASVRTDPVGPTQLDIQMD
PVQQKALSLVQTGSSGLRMSWTPSPGHVDWYDVTLKDTSSGSARSTRIMGSAAPQSGFTS
LVPGTLYSIDVVATAGNKSAPPVRTTAATAPSSVSGLQVASSSPHSLTVSWQVGPGRTER
IRVLLTDQSGVLMSNVTLENTVTSAVLDNLQPGTLYTVTVVTEAVGLQSSTYKQAVTVPA
MVSDLRLDNNGSSDTLQASWLPPAGGVDLYLVTLTAKGSTPQQLRLTPNVTQVLFQGLTP
GRSYQLTVSTTAGGKSTETRTSRRTVPDRAAALSVSGDRRVLRVTWSHPKGDWDTYSVLL
WNGSVVVVNDTISKLNTQYSFSVLDLGLVPGRLYGAEVTVQSGDLRSTAHCQGRLAPRPV
QQLLVRHTDESTLSVLWSRPPGEWDGYTVVLSLVDSASVLAQRILPWEARECTFNILASG
RRYTVTVVTNSGNLNSSASVNGWTTPAQVTQLQVSNGGSIDSLHTQWERASGDLDSYRVL
LVHDSSVIKNESVTANTTSLSFHSLRPGALYRVVLTTVRAGRASRQTVAEGRTVPAAVGE
VTVSNNGRMDFLSVSWRQAPGDIDSYLVTLRDKEKTVECPAVSKSSQCVFNSLVSGRLYN
ISITSRSGDYENHTFIQERTQPSKVQNPTATHAARDDSLKVYWHHAAGDYDVYQVFIKHN
NTFLQNKTVMKTQNECVFTGLVPGRLYTVLVSTWSGKYETSASTHGQTFPAVVQSLSLAS
QGTEDLRVTWLAAPGDVDHYEVQLLFNDMKVFPPMTLGSSEGECVLSSLTPGRLYKILVS
TFSGPHQKAQFIEGRTVPSKVKNIDVSNSGDSGSLKVSWTPGQGDVDEYSVFLFRENRQL
DVRAVLKHVNQVSFGSLQPGQLYSVTVQSVSGELVNNSTASARTVPSAVTALQVENLHST
SSLQVSWQEALGVSDGYELQVLDDRGSLVTNSSQPSGSTKHIFNGLTPGKKYRILVQTTS
GGVHSLGVSVVARTYPAAVTDLSIQSNTTSSLSFHWSPPEGEFESYEIVLYNSDDTLQNR
RHAPSSSQQWSFQGLRPGAPYKVVLLTRSGEKTNDSSIWARTVPAAVLSLKAQSGNQSDA
LWVNWDRADGDLSGYLLSLYNPNGSQQAEEQLGSEVTEFVFSDLVPGRLYRAVVLTLSGE
LANRASTRGRTAPRPPTSFLYGGVTNTSLEITWSGPVDSDYDDFDLQWTPKDQLSVINPY
HTRTSGSRILKGMYPGRAYNFTLRAVSGATDPGATPTYSLPIHNSIRTKPERVHGLHCRP
QSSTSISCSWGPPQADYDSYSIECLHQDSQKPVYTTLITDRHSTSYLITELIPHKRYTVC
VKAISDTTTSEAARDNVITMIDRPPRPGTRVDDKSAVVTKSSIFFSFNCSWFSDDNGAVR
FFTVVVTESEDVENVQPEQDHPLPSYLDYKSNSSIKSYQTSFFPSRCTDSSSHSFDINVG
TGMESLGGNCDHKDPESRDQFCDGPLKPKTAYRISVRAFTQLFDEEKNSFVVSSPLYTDT
FLSLPVVTEAEPLSGVIEGISAGLFLIAVVVGVGVLLVCRQKSRKVVQDRATVRMSLRRE
RPTSGVQAGVRGNRRISSPVKIPNFESHYNKLQADSNYLLSEEYEDLKDVGRNQPLDTAL
LPENRGKNRYNNILPYDSTRVKLSYVDDDPSSDYINACYIPGNNFRREYIATQGPLPGTK
DDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPFDQDPLYYGDLIVQMLSESVLPEWTI
REFKICSEEQLSFTPAFVRFHYTVWPDHGVPETTQSLIQFVRTVRDYVNRTPGSGPTVVH
CR
NT seq
6309 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagcccccaacacgacaccaacagacccaaccacaacgccaatagaggcaccg
acaaccagacctgtaaccacatctgtaaccaccacaactgcacccactacccccgaaacg
ccaaccatgacaaccacgcagaccataaccaccccaactccagccataaccaccccgact
ccagccataaccaccccgactccagccataaccaccccaactccaatcataaccacccca
actcctgccataaccaccccaactccaatcataaccaccccaactccaatcataaccacc
ccaactcctgccataaccaccccaactccagccataaccaccccaactccagccataacc
accccaactccaatcataaccaccccaactccagccataaccaccccaactaccaccaaa
tctgtcacaactaccatccaaaccacagaagctaccactccaaccaccacaaccagtaca
acgacgacaacagcaaccaccaccaccacacttcctccaactacaactacaccaactacc
cttccgaccacaacaccagaattaaccaccaccacacctgttcagactaccgaggctgca
cgctgctctgccaacttcacacagatcagcgcagactcgtattcagctgttgtgacttta
agcacatcagctctgctctgtaacttcaccttgttcaccgaggaggagaagatccaggct
gatggcgccgactgtgagccgcatggagagctcagtcactccttcacctgtcacatcacg
gatctggcacccgggactttgtaccgtctagtggtgatttccaagaaggatggagagaag
agcaacgcctcagtgcgcacagacccggttggtccgactcagctggacatccagatggat
ccggtccagcaaaaggcgctgtcattggtccagaccggttcctcgggtctgcggatgtcc
tggactccttcgccgggtcatgtggactggtatgacgtcactctgaaggacaccagttct
ggatcggcccgcagcactcggatcatgggcagcgcagcccctcagtctggcttcacctcc
ctcgtccccgggactctgtactctatagatgtggtggctacggccgggaacaagagcgct
ccacctgtccgcaccacagcagctacagctccctcctctgtcagcggcctgcaggtggcg
tcctcctccccacacagcctcacagtctcctggcaggtcggtccaggcaggacggagcgg
atcagggttctgctgacggatcagagcggggtcctgatgagtaacgtcactctagaaaac
accgtgacctcggctgtgctggacaacctgcagcccgggaccctgtacaccgtcaccgtg
gtaacagaggcagtcggcctgcagagctccacgtacaaacaggcagtgacagtcccagcg
atggtctcagatttgaggctggacaacaacggcagctcagacactctgcaggcgtcctgg
ctgccgcctgcagggggcgtcgacctttacctggtgaccctgacggcgaagggatcgact
cctcagcagctccgcctgacgcccaacgtcacccaggtgttgttccagggactgactccc
ggtcggagctaccagctgaccgtcagcaccacagctggaggaaaaagcaccgagaccagg
accagcaggaggacagtcccagaccgggcggcggctctctccgtgtccggtgacagaaga
gtgctgagggtcacctggtcacaccccaaaggcgactgggacacctacagcgtgctgctg
tggaacggctctgtggttgtggtgaacgatacgatcagtaaactgaacacacagtactcg
ttctccgtcctggacctcggtctggtgcctggacgcctctatggggccgaggtcaccgtt
caaagcggcgatctgaggagcacggcacactgccagggacgactggcccctcgtcccgtc
cagcagctgctcgtccgtcacactgatgaatccacgctgagcgtcctgtggagccgaccg
cctggcgagtgggacggctacacggtggtcctcagcctggtggactcagcctccgtcttg
gctcagaggatcctgccctgggaggccagagagtgcaccttcaacatcctggcctcggga
cgcagatacaccgttaccgtggtgaccaacagcggcaacctgaacagctctgcctccgtg
aacggatggaccactccggctcaggtcacccagctgcaggtttctaacggcggcagcatc
gacagcctccacacgcagtgggaacgagcctcgggggatctggactcgtaccgcgtcctg
ctggtccacgacagcagcgtcatcaagaatgagagcgtgacggccaacaccaccagcctc
agcttccacagtctgaggcccggcgccctctacagggtggtgttaaccactgtgagagcc
ggacgagcctccaggcagaccgtcgcagagggacgcactgtcccagctgcggtgggtgag
gtaacggtcagtaataacggtcgtatggacttcctcagcgtgtcgtggcgtcaggctcca
ggtgacatcgacagttacctggtgacactgagagacaaagagaagacggttgaatgtccg
gctgtttctaaatccagtcagtgtgtttttaactctctggtgtccggacgtctctacaac
atctccatcacctcacgcagcggcgactacgagaaccacaccttcatccaggagagaaca
cagccgtcaaaggtgcagaaccccacagcgacccacgcagcccgggacgactccctgaag
gtgtactggcaccacgcggccggggactacgacgtgtaccaggtgttcatcaaacacaac
aacaccttcctgcagaacaagacggttatgaagacgcagaacgagtgtgtgttcaccggc
ttggttcccggcagactctacacggtcctggtgagcacctggagcgggaagtacgagacc
agcgcctccacgcacgggcaaaccttcccggccgtggtgcagtccttgtctcttgccagt
cagggcaccgaggacctgcgggtgacgtggttggcggctccgggtgacgtggatcactat
gaggtgcagctgctgttcaacgacatgaaggtgtttcccccgatgacgctgggcagcagc
gagggggagtgcgtcctgtcgtcgctcacgcccggacgcctctacaagatcctggtgtcg
acttttagtggcccacaccagaaggcccagtttatagagggacgcacagttcccagtaaa
gtgaagaacatcgacgtgagtaacagcggtgacagcggcagtctgaaggtgagctggacg
ccgggtcagggcgacgtggacgaatactcggtgttcctgttcagagagaaccggcagctg
gatgtccgagccgtcctcaaacacgtcaaccaggtgagcttcggctccctgcagcccggc
cagctgtacagcgtcacggtgcagtcggtcagcggagagctggttaacaacagcacggcc
agcgcacgaacagtcccctcagcagtgacggcgctgcaggtggagaacctgcactccacc
agcagcctgcaggtgagctggcaggaagctctgggcgtgtccgacggatacgaactgcag
gttctggacgacagaggcagtctggtgacaaactcctcccaaccctccgggagcaccaag
cacatattcaacggtctcacccctggaaagaagtaccgcatcctggtccagaccaccagc
ggaggagtccatagtctgggggtcagcgttgtggctcgtacatatcctgcagccgtcact
gatctgtccattcaaagcaacaccaccagcagcctgtccttccactggtctccaccggag
ggcgagttcgagtcctacgagatcgtcctgtacaacagcgacgacacgctgcagaaccga
cgccacgccccgtccagcagccagcagtggtccttccagggcctccgacccggagctccg
tacaaggtggtgctactgacccgcagcggggagaagaccaacgactcctccatctgggct
cggacagtcccggcagcagttttatctctgaaggctcagagtggaaaccagtctgacgct
ctgtgggtgaactgggatcgagccgatggcgatctgagcggctacctgctgtctctctac
aaccccaacggctcgcagcaggccgaggagcagctggggtcagaggtcaccgagttcgtc
ttcagcgacctcgtacctgggcgcctgtaccgagccgtggtgctgactctcagcggagag
cttgccaacagagcgagcacgcggggaaggacggctcccagaccgccgacctccttcctg
tacggaggcgtaaccaacacctcgctggagatcacctggagcggccccgtcgactccgac
tacgacgacttcgacctgcagtggactcctaaggaccagctgtccgtcatcaacccgtac
cacacccgcacctccggcagccgcatcctgaaggggatgtaccccggacgcgcctacaac
ttcaccctccgagccgtcagcggagccacggaccctggagccacgccaacctacagtctg
cccatccacaacagcatccgcaccaagccggagcgagtccacggcctccactgccgccct
cagagctccacctccatctcttgctcctgggggcctccgcaggccgactacgactcctac
tccatcgagtgtctgcaccaggactcccagaagccggtctacacgacgcttatcaccgac
cgccattccacctcctatctcatcacggagctgattccacacaagcgctacaccgtctgc
gtgaaggccatctccgacacgaccaccagcgaggcggctcgagacaacgtgatcaccatg
atcgaccgtcctccccgccccggcactcgggtcgatgacaagtccgccgtggtcaccaag
tcctccatcttcttcagcttcaactgcagctggttcagcgacgataacggagccgtcagg
ttcttcaccgtggtggtgaccgagtctgaggacgtggagaacgtgcagccggagcaggac
caccctcttccctcctacctggactataaatccaacagctccataaaatcctaccagacc
agcttcttccccagccgctgcaccgacagcagctctcacagcttcgacatcaacgttggg
accggcatggagtcgctgggaggaaactgtgaccacaaagacccggagagcagggaccag
ttctgtgacggaccgctcaaacccaaaactgcttacagaatcagcgtccgagctttcact
cagctgtttgacgaagagaagaacagcttcgtcgtctcctctcctctctacaccgacaca
ttcctctcccttcctgtggtcactgaggccgagcctctgagcggtgtgatcgagggaatc
agcgccggcttgtttctgatcgccgtggtggtgggagtcggagttctgctcgtctgcagg
cagaaatcacgcaaagttgtgcaggacagagcgacggtcaggatgagtctgaggagggag
agacccacatcaggagttcaagcgggggtcagaggaaaccgtcgaatctcaagtcccgtt
aaaatcccgaactttgagtctcattacaacaaactgcaggccgactccaactacctgctg
tcagaggagtacgaggatctgaaggacgttggtcgtaaccagccgctggacaccgctctg
ctgccggagaaccgcggcaagaaccgatacaacaacatcctcccatatgactcgacgcgg
gtgaagctgtcgtacgtggacgatgatccgagctccgactacatcaacgcctgctacatt
cctggtaataacttccgtcgggagtacatcgccactcagggtcctctgccgggaacgaaa
gacgacttctggaagatggtgtgggagcagaacgtccacaacatcgtcatggtgacgcag
tgtgtggagaaaggcagggtgaagtgtgatcactactggccgttcgaccaggacccgctg
tactacggagacctgatcgtccagatgctgtcggagtcggttctgccggagtggaccatc
agagagttcaagatctgcagcgaggaacagctgagcttcaccccggctttcgtcaggttt
cattacaccgtgtggcccgatcacggagtcccagagacaacgcagtccctcatccagttc
gtccggaccgtcagagactacgtcaacaggactcccggatccggacccacggtggtgcac
tgcaggtaa
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