Scomber japonicus (chub mackerel): 128359061
Help
Entry
128359061 CDS
T09718
Symbol
lrrk2
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 2
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128359061 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128359061 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128359061 (lrrk2)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128359061 (lrrk2)
Protein kinases [BR:
sjo01001
]
Serine/threonine kinases: TKL group
LRRK family
128359061 (lrrk2)
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
128359061 (lrrk2)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128359061 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_LRRK2
Beta-prop_LRRK2
ANK_LRRK2
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
Roc
COR
Ras
LRR_14
LRR_1
LRR_13
Ank_2
Ank_3
WDR55
Arf
LRR_NXF1-5
LRR_9
AAA_22
AAA_16
Beta-prop_EML_2
nSTAND3
PduV-EutP
Viral_helicase1
Septin
NACHT
Ank_5
G-alpha
T2SSE
Ank_4
cobW
ATP_bind_1
SRPRB
AAA_7
MMR_HSR1
GTP_EFTU
ABC_tran
DLIC
Gtr1_RagA
MobB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
128359061
NCBI-ProteinID:
XP_053175451
LinkDB
All DBs
Position
5:complement(7302712..7339288)
Genome browser
AA seq
2548 aa
AA seq
DB search
MVNQEELEERLKKLLVRLKTPQEDRQLCTLIQIIQDLLFLAHTDCADLFQDKDVHSPLMV
VLSSYISSRGVQQVGWSLLCRLIEICPNTLNQLTRHLQAAKEWEVLGVHQQILKVLSQFS
NDCRVTMVGLRALALLLRSDNVPLLVLEEEEDVFGLVVQAMKTFHTSEEVQFQGCGALQL
LLETVSDDHLVEFVENQDHAVVLTALQSFPDSPDLLLQAMKVLLPLACPGSNVEILMSGG
ARCYSMLITAMDAYPEVEELQETACCLFKRFTSESYYNILVLNGVQRVAVRACQTFPDNA
TLQAAALSCLADLTATIVQNKAVAEQGLEEGEAEENRGKEEVEDMGLGWMEICCIALELH
AAEPAVQEAASWAIHNLLLHGAGVNHSEEEQDERTPVHRQLMAAMLLHSSSPSVFKAATC
AIATLITHNGKMRSLLLSSGLHVNIVEMMKRHSTSEEVSISACKLLGLLFQGRTASLDEL
TMAMSQILCSMKVHNFQPEVQLEALQASLVFLCPDRSLREHGVSVADPDMADVSLKVLKN
QCVVEGAHTLYLEVLNRFISSSIIQKCGLRVLSALADCSGAVDLLCQQGAIDTVLHTLQM
FPQEREIHYWGLTLLNYLVSKKKLSRMIVPVLASVLVTSLIQYREDSEMLLKCFQVSLRM
LDACSGAAAELQREDFDRQIFQHLKEETPDHSNNQLRKSVCLALSKMWCNHELHYSMLEK
ACKDGDTTMAECLIELGADINRKTKTNSLIYQVCEKGGPLELVELLLSKGAHEQHLRRAL
AVSVKRGDGPTVIQLLGRLGLDLNNSSLCLGGFRLGRLEATWLSPLLAERGRTFSLRYNN
SRGMNLAKYIQSFQRSKNTSGPPRSLGDPCLTSGYISDESDDSSFSFVSMDDSLFLNDDM
ESDGKKLQKCWVDLILLYVHRGSDSLTGALSPKPHNNSSEELRGSSFKRKQGRRRHASAE
SGGRSGSNQKHLVSGENSAALPKERERIRLLDLSGNELDSLSCLMDDIFVQQQLGHLFRL
DLSHNSLLEFPSALCQNLKSLTRLDLQGNQLQSLPVELLALPSLSMLNVSRNCVGPLLTF
DPAVTCPSLRQLNLSFNKITTFPHELGRAMDQLEELFMEGNSITELCTPLCLPEIKLLDV
SKNNVENISPDFLTCCPKLETFNASMNKICSLSHLPTKITTVKLANNNFTYVSEAILDLP
NLRSVDMRTNSIAILPVPGFWASSNLRELMFSQNCISTLDLSGPIYKWARLEKLHLSGNK
LTEIPPQIGLLEGLTSLDVSRNSGLRSFPDEMGKLSRLWDLPLDGLRLQLDLKLIGSKTK
DIVRFLQQRLKKAVPYYRMKLIVVGNAGSGKTTLIQQLMKLKRSQLSSKQTAVGIDVRDW
TIRERDKKKMVLNVWDFSGGEEFSGSHPHFLTSRALYLVVYNLSKGAGQVDALKPWLFNI
KAVAPLSPVILVGTHTDVSEDVQLQACMTKIREELLNHQGFPAIRDYHMVSACEDSDAMT
KLRKAITTREVTNFKIQGQPVMGQLVPDSYVELERRVLQERTRVPPEFPVLRHHELLQLI
QESQLQLEEAELPHAIHFLSEAGVLLHFDDPALQLQELYFIDPQWLCNIISQKLTLKSSG
FWEHPKGVVQRSVVEKFLFETKCFPKSHLTQFFKLLEKFQIALPFGEDQLLVPSSLPKHR
PIIELPHCENSEVIVRLYEMPYFPMDYWSRQISRLLEFSSYLLYGREKVVRPNRIYWRRG
VYLSWSPEAYCLVESATMDESPSCFVRITVPSSRKGRVLLGQVVDHIDSLLEEWFPGLLN
TDMHGSGEALLKKWAYYSFEDGQERKKMLLEDLFTHFNDDFLLKNPENERCTIPISQIAP
DLVLSDQPGGTILDSEELEVDLSIENQLGGGGFGTVYRGIYKNEEVAVKIFNKHASELYI
YRLLRQELAVLGRLRHPSLVGLLAAGSAPQVLVMELAMRGSLDSLFEHENGSLNRKLQHR
IALHVADGLRYLHSAMIIYRDLKPHNVLLFNLKTDSEIIAKITDYGIAQYCCSMGVRSSE
GTPGFRAPEVARGNVIYNQQADVFSFGLLLYDLLTCGERICDGMKFPSEFDEVAVQGKLP
DPVKHYGCSPWPGFQALMKDCLRERPQDRPTSAQVFDRLNSGEMLCLMRDLVVPRAVNAD
CFTVSSRSSDGPSSSHKAWLGGGSNSQKTGSVTAVDLDTNTVTTQVIDTSPVLCLLTVQI
PNDTHDWLVAGTQSGSLVVMSTLDKSPSHQLQSVTDAVTSLYFHVHARRTQRKNYLLVGT
ADGILTIYEDSVLKQENGQPVKTLTVGNVNTPVMCLGQSMHSLDNRSVWAGCGTKILSFS
ADYEVSKSIDTRPNLIFQQQRSLSGEACVSRMVVDQYVYLSKVGAATVEVWDKRSERMVD
CIDCAQIIRHDSGCRGKQGSEVDLPTEAAPSWARVKALLVQSAATLWIGTRGGHLLLLEL
SKHQTLQVIAPRCNSIRCIASALIETLNWKNVVLVLGRRLPQDKNQLDEDSVLMAWNSTL
PMEVKDLNKHCEKREQITAQMREQLHQD
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atggttaaccaagaggaattggaagaaaggctgaagaagctgctggtgaggctgaaaacc
ccacaggaagacaggcaactttgcacgctgattcaaatcatccaggacctgcttttcctg
gcacacacagactgtgctgatctgtttcaggacaaagatgtccacagccccctcatggtg
gtgctctcatcctacatcagcagcagaggagtccagcaggtgggttggtcgctgctgtgt
cggctgattgaaatatgccccaatacactcaaccagctgaccagacatctgcaagccgcg
aaggaatgggaagtactgggagtgcaccagcagatcctgaaggtattgtctcagttcagc
aatgactgcagagtgactatggttggactccgagccctggctctcctgctaagatcagac
aatgttcctctgctggtgctggaggaggaggaggatgtgtttggcctggtggtgcaggcc
atgaagacattccacaccagcgaagaagtgcagttccaaggctgtggcgctctgcagttg
ctcctggagacagtgagtgatgaccacctggtagaatttgtggagaaccaagaccatgct
gtggttctcacggctctgcagagtttcccggacagtcctgatctgctcctgcaagccatg
aaagtgctgcttccgctggcttgccctggcagtaacgtggagattttgatgtcaggaggt
gctcggtgctacagcatgctcatcacagccatggacgcctacccggaggtggaggagcta
caggagacggcctgctgcctgttcaagaggtttacatcagagagctactacaacatcctg
gtgctgaacggcgtccagagagttgcggtcagggcctgtcagacgttccccgacaacgcc
acgctgcaagccgccgctctgtcctgcctggctgacctcactgcaaccatagtacagaac
aaagcagtggcggagcaaggtctggaagaaggagaggcggaggagaacaggggtaaagag
gaagtggaggacatgggccttggctggatggagatttgctgtatagcactagagctccac
gctgctgagccagctgttcaggaagctgcaagctgggccattcacaatctgttactgcac
ggagctggagtgaaccattcagaggaggagcaagatgagaggactcctgttcacagacag
ttaatggcggccatgctgctccactcctcctctcccagtgtgtttaaagctgctacctgt
gccatcgccacactcatcacacacaatggtaaaatgcgttccctgctgctgtccagtggc
ctccacgtcaacatagtggagatgatgaagagacattcgacttcagaagaggtttccatc
agtgcctgcaaactgcttggcctcctcttccagggaaggacggccagtctggatgagctg
accatggccatgagccagatcctctgctccatgaaggtccacaacttccagccggaggtg
cagctggaggcgttgcaggccagcttggtcttcctctgcccagacaggagcttacgggag
catggcgtctcagtggcagaccccgacatggccgacgtgtccctgaaagtcctgaagaac
cagtgtgtggtggagggagctcataccctctacctggaggttctcaacaggttcatcagc
agctcgatcatccagaagtgtggtttgagggtgttgtctgctctggctgactgctctggt
gcagtggacctgctctgccagcagggggcgatcgacacagtgctgcatacactacagatg
ttcccacaggaacgagagatacactattggggtctgaccctgcttaactacctcgtatcc
aagaagaagctgtcgcggatgatcgttcctgttctggcctcagttttagtcacttcactc
atccagtacagagaagactctgagatgcttctgaagtgttttcaggtgtcgttgaggatg
cttgacgcctgttcaggagcagctgctgaactgcagagagaagactttgacaggcagatc
ttccagcacctcaaagaggagactcctgaccacagcaacaaccagctgcggaagtcggtg
tgcttggctctgtctaaaatgtggtgcaaccacgagttacactacagcatgctggaaaag
gcctgcaaggacggagacaccacgatggccgagtgtctgattgagctcggcgctgatatc
aacaggaagacaaaaacaaactctctcatctatcaggtctgtgagaaaggaggaccacta
gaactggtggagctgctgctgagcaaaggtgcccacgagcagcacctccgtagggctctg
gctgtgagcgtgaagcgaggtgacggacctactgtcattcagctgcttggccgtctgggt
ctggacctcaataacagctccctctgtctggggggcttccgactggggcgtcttgaagcc
acttggctcagccccctgctggctgaaagaggcagaacgtttagtctccgttacaacaac
agtagaggtatgaatctggcaaagtacattcagtctttccagaggtctaaaaacaccagt
ggtccgcccaggtctctaggtgacccgtgtttgacctctggctacatttctgacgagagc
gacgactccagcttcagcttcgtctccatggacgacagcctgttcctcaacgacgacatg
gagagtgacggtaaaaagcttcagaaatgttgggtagacctcatcctgctgtatgttcac
agagggagtgattcactgacaggagctctgtctccaaagcctcataataactcttcagag
gagctgaggggcagctccttcaaaaggaagcagggacgtcgcagacatgccagcgcagag
agcggtggaaggagtggctccaatcaaaaacatctggtatctggtgagaactctgctgct
ctccccaaagagagagagaggatccggctgctggacctgtcaggaaatgaactggactct
ctctcctgtctgatggacgacatttttgtccagcagcagctggggcatctcttccgcctg
gacctgagccacaacagcctcctggagtttccctctgcactgtgtcagaatttgaagagt
ctgacacggctggacctgcagggaaaccagctgcagtcgctgcctgtggagctgctggct
cttccctctctgagcatgctgaacgtctctcgcaactgtgtcggcccgctgctgaccttc
gaccccgctgtcacctgcccctcactgcggcagctcaacctgtcttttaacaaaatcact
acattcccccacgagctgggccgggccatggatcaactggaggagctgtttatggaaggt
aacagtataactgagctctgcacccctctatgtctgccggagatcaaactgcttgatgtg
agcaagaacaacgttgagaacatttctccagacttcctgacctgctgccccaaactggaa
accttcaatgcatccatgaataaaatctgctccctgtcacatctgccaaccaagatcaca
acagtaaaactagccaacaacaacttcacttacgtttcagaggcgatacttgatctccca
aacttacgatcagtggacatgagaaccaacagcattgcgattctgcctgtgccgggtttc
tgggcatccagcaacctgagagagctgatgttcagtcagaactgtatcagcactctggat
ctgagtggaccaatctacaaatgggccagactagagaaactccacctgagtggcaacaaa
ctcactgagatccctcctcagatcggtctgttggaaggcctgacctccctggatgtgagt
cgtaattctggcctgcggtccttccctgatgagatggggaagctcagcaggctgtgggac
ctgccgctggacggccttcgactccagctggacctcaaactgattggcagcaagactaaa
gacattgtcaggttcctgcagcagcggctgaagaaagcagtgccgtactaccggatgaag
ctcatcgtggtggggaatgccggcagcgggaagaccaccctgatccagcagctgatgaaa
ctgaagcgctcccagctgagctccaagcagaccgccgtcgggattgacgtgcgggattgg
accatcagggaacgggacaagaagaaaatggtgctgaacgtctgggacttctcaggtgga
gaggagttcagtggctctcatcctcacttcctgacttccagagctctctacctggtggtt
tacaacctgagtaaaggagccggtcaggtggacgccctcaaaccctggctcttcaacatc
aaagcagtagctccgctctccccggtcatcctggtaggaacccacacagatgtgagtgag
gatgtgcagctgcaggcctgtatgactaagatcagagaggagctgttgaaccaccagggc
ttcccagccatcagggactaccacatggtctccgcctgcgaggactctgacgccatgacc
aagctccgcaaggccatcaccaccagggaggtcaccaacttcaagatccagggccagcct
gtgatgggtcagctggttccagatagctatgtggagctggagcgccgggttctccaggag
aggaccagagttcctccagagttccccgtcctcaggcaccatgaactgctgcagctcatc
caggagagtcagctgcagctggaggaagctgagctgccccacgccatccacttcctcagt
gaagctggagttttactgcactttgatgatcctgcgcttcagctccaggagctttacttt
atcgacccacagtggctgtgcaacatcatctctcagaaactgacattaaagagttctggc
ttctgggagcatcctaagggagtcgttcagcgctcagtggtggaaaagttcctgtttgag
accaaatgtttccccaagagtcatctgacgcagttcttcaaactgctagagaagtttcag
atcgctctaccctttggcgaggaccagctgctcgtacccagcagtttgcccaaacacaga
ccaataatagagcttcctcactgtgagaactcagaggtgattgtgcgtctgtacgagatg
ccctacttccccatggattactggtcacgccagatcagccgcctcctggagttctcttct
tatttgctttatggacgagagaaagttgttcgaccaaaccggatctactggaggagaggt
gtgtacctgagctggtctcctgaggcctactgtctggtggagtctgctacaatggacgag
agcccttcttgcttcgtcaggataactgtgccttcttcaagaaaaggtcgggtgttgctg
ggtcaggtggtagatcacatcgactctctgctggaggaatggtttcccggccttcttaac
accgacatgcatggcagtggagaagccctgctgaagaagtgggcttactacagctttgag
gatgggcaggagaggaaaaagatgttgttggaggacctctttacccatttcaacgacgac
tttctgctgaagaatccagagaacgagcgctgcactattcctatcagtcagatcgcccct
gacctggtactgagtgaccagcctggaggaacaatactggacagtgaggagctggaggtg
gatctatctatagagaaccaactggggggcggtggctttggaactgtctatcgaggcatc
tacaaaaatgaagaggtggctgtgaagatattcaacaagcatgcatctgagctttacatc
tacaggctccttagacaggagctggcggtgttgggtcgtctccgtcaccccagcctggtt
ggtctgctggcagctggctcagctccacaggtcctggttatggagctggctatgcgaggc
tccctggactctctcttcgagcatgagaacggcagcctcaacaggaagctccagcacagg
atcgccctgcacgtggccgatggactcaggtaccttcactcagccatgatcatctaccgc
gatctgaagccccacaacgtcctcctgttcaacctgaagaccgactctgagatcatcgcc
aagatcacagactacggcatcgctcagtactgctgcagcatgggagtgaggagctctgag
ggcacgccaggtttccgggcaccagaggttgctcgcggtaatgtgatctacaaccagcag
gccgatgtgttttcctttggtttgcttctctacgacctcctgacctgcggcgagcgcatc
tgtgatggcatgaagttccccagtgagtttgatgaggtcgccgtacagggaaagctgcca
gacccagtaaaacactacggctgctcaccttggccgggcttccaggcgctgatgaaggac
tgtctgagggaaagacctcaggatcgacccacctctgctcaggtgtttgacaggctgaat
tcaggagagatgttgtgtctgatgagggatctggtggttcccagagcggtcaacgctgac
tgcttcacagtgagctcccgtagtagcgacggcccctcatccagtcacaaagcctggctg
ggagggggcagcaacagccagaagacgggctccgtcacagctgtggacctggacaccaac
acggtcactacacaggtgatagacaccagtcccgtgctgtgtcttctgaccgtccaaatc
ccgaacgacacacatgattggctggtggcaggcactcagtctggctccttagtggtgatg
agcactctggacaagtcaccttcgcaccaactgcagagtgtcacggatgctgtcacctca
ctgtacttccatgtacatgctcgccgcacccaaagaaagaattatttgctagtgggaaca
gcagatgggattctcactatttatgaggactctgtactgaagcaggagaacggacagccg
gtaaaaactctcaccgtaggcaacgtcaacacacccgtcatgtgtctgggccagtcgatg
cactcgctcgataacaggtctgtgtgggccggctgcgggaccaagatcctctccttttcg
gccgactatgaagtcagcaagtccatcgatacgagacccaacctcatcttccagcagcaa
cgctcgctcagtggggaggcgtgtgtgtctcgtatggttgtggatcaatacgtgtacctg
agcaaagttggggcagcgaccgtcgaggtttgggacaagaggagtgagaggatggtggac
tgcatcgactgtgctcagataatcagacacgactctggctgcagaggcaagcagggcagt
gaggtggatctgcccaccgaggcggctccgtcctgggctcgggtgaaggccctgctggtg
cagagcgctgccactctctggatcggcactagagggggccacctgctcctgctggagctc
tccaaacaccagacgctgcaggtcatcgcccctcgctgcaactccatccgctgcatcgct
tctgcacttatagaaacactaaactggaagaatgtggtgctggttttgggcagacgactc
ccacaagacaagaatcagttagacgaggattcggtgctgatggcatggaacagcacgctg
ccgatggaggtcaaagacctgaataaacactgcgagaagagagagcagatcacggcccaa
atgagagagcagctccatcaagactga
DBGET
integrated database retrieval system
