Scomber japonicus (chub mackerel): 128359063
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Entry
128359063 CDS
T09718
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04110
Cell cycle
sjo04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128359063 (smc1b)
04114 Oocyte meiosis
128359063 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128359063 (smc1b)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128359063 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
128359063 (smc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
128359063
NCBI-ProteinID:
XP_053175453
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Position
5:7549177..7567697
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AA seq
1252 aa
AA seq
DB search
MGYLRQIDIENFKSWRGKQVIGPFMRFNCIIGTNGSGKSNVMDAVSFAMGERAASLRVKH
LRELIHGAHIGRPVSNSGSVAMRYRDDEDHETVYCRTISGDSSEYRINGVHVTLAKYLEE
LEKIGIVTKARNCLVFQGAVESIALKDPKERTKMFELISQSKEFAAEYEKKKEALQRAKE
DTQFQFNKKKSATAERKQVSQEKIEAQKYQTLVDDLHQNRLQLSLAELYHNEKGIGVLSD
TLSEEQQTAAAQNNKLVNSEQTVKTCKKEHGRLTRELQHMEKEIRSQEHVLSQSRSQYIK
AKVNTSHHKKKADGIRDTLKKGQKLITVKEQELAEGRQEISELERTWKSYEKQVKKEGVS
RMDIELDEDQLERYKELKELARKQSAVLSQQADKLDWEVKADIEKMAFDQRRKKEVEVGI
RNNQTQLEDLTRRAEKLEEYTKMCQSSLEECRQQEESLTAELQQGRQRSVVVNEELGQVL
EELGNASLDSQESKRQLRRKELLERLRRLYPESVYGRLFDVCSPIHKKYQLAVTKVLGHF
MNAIVVTTEKVARDCIDFIKEERSEPETFLPIDYLDVSPLNERLRDVPGAKMVVDVIQVN
NSTGAAQLKKVVQFVCGNALVCENIKEARSVAFDRKERIKTVALDGTLFTKSGIISGGSS
DLRTKARCWDEKAVAKLKERKEQLMSEIRDLMRLKRKEADLKQIIAHAQGAQTRLKYSKT
EMDNLRKKNILRCQAEISRMESEMANLESQIQMQQESVEAKEAKMTKIKKQIEQMEDVVF
DDFCAEIGVNSIREYEQEHLKHQAELDKKRLEFESHCARLNAQLEYNQEQLKQQEKKLQK
MVETIENEERTVVEQRKVEETLLVSVEDGENKLLELKDELQSKKRQVAAAKSELDQKTQR
LQEFNKELMKLQRDVLAAETALEQKRLARHNLLLACKIQGLPINLQSGSLDEISEVQLDT
ESESTSATMHIYDREAQLVIDYSGLNEEFRTARSEEEVEACVEKLKESVSSIEGVLHRTT
APNLKALEKMREVKDKLQGVTDAFEASTRAARKCSQEFEQVKARRFQLFSQCFEHVSVVI
DQIYKRICRNRSAQAILSAENPDEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAALALL
FAIHSFLPAPFFILDEVDAALDNSNIGKVTSFIREESRENMQIIVISLKEEFFSKADALL
GVYSDFDVCMLSRILTLDLRPYPLAEEENGSQVETESREAKREVSRSQESTA
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaagacaaattgacattgaaaacttcaagtcatggcgaggaaagcaggtt
attggtccttttatgcgatttaactgcataattggcacaaatggctctggtaagtccaat
gtgatggacgccgtgagctttgccatgggagagcgtgcagcctccctccgggtgaagcac
cttagggagctgatacacggagctcacatcggacggccggtgtccaacagcggcagcgtg
gccatgcgctaccgggacgatgaagaccacgagacggtctactgtcggaccatctcaggc
gactcctctgagtatcgtatcaatggcgtacatgtcactctggctaaatatctggaggag
ctggagaagattggcattgtgaccaaagctcgaaactgtctggtgttccagggggcagtg
gagtccatagctttgaaagacccgaaggagaggaccaagatgttcgagctcatcagtcag
tccaaggagtttgctgcagagtatgaaaagaagaaagaagccctgcagagagccaaagag
gacactcagtttcagttcaacaagaagaaatctgccactgccgagaggaagcaggtgtcc
caggaaaaaatagaggcccagaagtaccagacactggtggatgaccttcaccaaaaccgc
ctgcagctgagcctggctgagctgtatcataatgagaagggcatcggcgtcctcagcgac
accctgagtgaggaacagcagactgcagccgctcagaacaataaactggtaaactcagag
cagacggtcaaaacctgcaagaaggaacatgggcgactcaccagagagctgcagcacatg
gagaaggagatccgttcccaggagcatgtcctgtcccagtctcggtcccagtacatcaaa
gccaaagtcaacacctcccatcacaagaagaaggcagacgggatccgtgacacactgaag
aagggtcagaagctgataactgttaaagagcaggagctggcagagggtcggcaggaaatc
tctgagcttgagcggacctggaagagctatgagaagcaagtcaagaaggagggagtctcc
aggatggacatcgagctggatgaggatcagctggagcgatacaaagagctgaaggaactt
gctagaaagcagagcgccgtcctcagccagcaggcagataagctggactgggaggtgaaa
gcggacattgagaagatggcattcgaccagcgcagaaagaaggaagtggaggttgggatc
aggaacaaccagactcagctggaagatttgactcgcagagcagagaagctagaggagtac
accaagatgtgccagtcgtctctggaggagtgccgtcagcaggaggagagcctgactgca
gagctgcagcagggccgccagcgcagcgtggtggtgaacgaggagctgggccaggtgctg
gaggagctggggaacgcttccctggacagccaagagagcaaacgccaactgcggcgcaaa
gagctgctagagaggcttcgcagactctatcctgaaagtgtgtatggccgtctgtttgac
gtgtgcagccccatccataagaagtaccagctggctgtcaccaaggtacttggccacttc
atgaacgccatcgtggtgaccacagagaaagtggcccgtgactgtatcgacttcatcaaa
gaggagcgatccgaacccgagaccttcctgcccattgactacttggatgtgagccctctg
aacgagcgactgagggacgtcccaggtgccaagatggtggtggatgtcatacaggttaac
aattccacaggtgccgctcagctgaagaaggttgtgcagtttgtctgtggcaacgcgctg
gtgtgtgagaacatcaaagaggcgaggagcgtggcttttgacaggaaggagcgcattaag
acagtggctctggatgggacgctgtttacaaagtcaggtattatctctggaggctccagt
gacctgcggaccaaagcgcgctgctgggacgagaaggctgtggcaaagttgaaggaacgc
aaggaacagctgatgtctgagatacgcgatctgatgaggctgaagcggaaggaggcggac
ttgaaacagatcattgctcatgctcagggtgctcagacccgcctcaaatactccaaaact
gagatggataacctccggaagaaaaacatcctcagatgtcaagcggagatttctcgcatg
gaaagtgaaatggcaaacctggaatctcaaatccagatgcagcaggaaagcgtagaggcg
aaagaggcaaagatgacgaagatcaaaaaacagattgaacagatggaggatgtggtgttt
gatgacttctgtgctgagatcggcgtgaacagcatcagagagtatgagcaggagcatctg
aaacatcaggcagagctcgataagaagcggctggagtttgagagccactgcgctcgcttg
aatgcacaactggaatataatcaagagcagctgaagcagcaggagaagaaactccaaaaa
atggtggagaccattgagaatgaggagaggacagtggttgagcagaggaaggttgaggag
acgctgctggtgtcagtggaagacggtgagaacaaactactggagctgaaggacgagctg
cagtctaagaagcgtcaagtggccgctgctaaatctgagctggaccagaaaactcagagg
ctccaagaattcaacaaagagctgatgaagcttcagcgggatgtgttggctgcagagacg
gctttggagcagaaacgtttggccagacacaacctgctgctggcctgtaagatccagggc
ctgcccatcaatctgcagtcagggagcctggatgaaattagtgaggtgcagctcgacaca
gaatctgagagcacttcagccaccatgcacatctacgacagagaggctcaactagtgatc
gactactctggtctgaatgaagagttcaggaccgcacggtcagaggaggaagtggaggcc
tgcgtggagaagctgaaggagtccgtttcctccatagagggagtgctacatcgtacaacc
gcacccaacctgaaagctctggagaagatgagggaggtgaaagacaaactacagggagtg
acggacgcgtttgaggcgagcaccagagcagcgaggaagtgcagtcaagagtttgaacaa
gtcaaagctcggcgcttccagctcttcagccagtgcttcgagcacgtgtctgtcgttatt
gaccagatctataaaagaatatgcaggaacagaagcgctcaggctattctgagcgctgag
aatccagacgagccgtacctgggcggcatcaactacaactgcgtggctccagggaaacgc
ttcatgtctatggacaatctgtccggtggagaaaaggccatcgctgctctcgccctgttg
ttcgccatccacagcttccttcctgctcctttcttcattttggacgaggtggatgcagcc
ttggacaactcaaacatcggcaaggtgaccagtttcatcagggaggagtcccgagagaac
atgcagatcatcgtcatctccctgaaggaggagttcttctccaaggccgacgctttgctc
ggagtttattcagattttgatgtatgcatgttaagccgcatcctgaccctggatctgcgt
ccctaccctctggccgaagaggaaaatgggagtcaggtggagacggagtccagagaggcc
aaaagagaggtctcacgtagtcaggaatccactgcatga
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