Scomber japonicus (chub mackerel): 128359137
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Entry
128359137 CDS
T09718
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128359137 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjo01007
]
128359137 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128359137 (kars1)
Enzymes [BR:
sjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
128359137 (kars1)
Amino acid related enzymes [BR:
sjo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
128359137 (kars1)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128359137 (kars1)
Prokaryotic type
Other AARSs
128359137 (kars1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
128359137
NCBI-ProteinID:
XP_053175547
LinkDB
All DBs
Position
1:complement(22240285..22247381)
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AA seq
610 aa
AA seq
DB search
MLCLVRAARQQLCQAYGVRGQWLKYAPPCTAAAPAQICGTRWRGDKSELKRRMKAEKKAA
EKETKVKEHLAQKKESNDQGAQNVCGLDDETLDPNQYYKIRTQAIQELKGTAEDPYPHKF
QVDLSLTEFIEKYNNLEAGDQLTDVVLNLSGRVHAKRASGAKLLFYDLRGEGVKLQVMAN
SRNYKSEEDFVAINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFITRSKIITYLRSFLDQLGFLEIETPMMNIIPGGAV
ARPFVTYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDLTHNPEFTTCE
FYMAYADYHDLMDITEKLLSGMVKHITGGYKVTYHPDGPEGQAYEIDFTPPFRRVSMTHD
LEKIMGVKFPPTDSYDSAETRKFFDELCAQKGVECPPPRTTARLLDKLVGDFLEVTCINP
TFICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEICNAYTELNDPVRQRELFEQQSKAK
AEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDDNK
TSAPSEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtctggtcagggcagccaggcagcagctgtgccaagcctatggggtcagggga
cagtggttaaaatatgcacccccatgtacagctgcagccccagctcaaatttgcgggacc
cgatggagaggtgacaaaagtgagctgaagaggcgaatgaaagctgagaaaaaggctgct
gagaaagaaaccaaagtcaaagagcatctggcacaaaagaaggaatcaaatgaccaggga
gcgcaaaatgtctgtgggctggatgacgagacgcttgacccaaatcaatactataagatc
cgcacccaggccatccaggagctgaagggcacagcagaggacccatacccacacaagttt
caagtggacttgtcactcacagagttcattgagaaatacaacaatcttgaggcaggagac
cagctaacagatgttgttctcaacttgtcaggccgcgtccatgccaagagggcttccggt
gccaagctgctgttttatgacctgcgaggtgaaggcgtcaagttgcaagttatggccaac
tcaaggaactacaagtctgaggaagactttgtggccatcaacaacaagctgcggcgcggt
gacattatcggtgtccggggtaacccagggaagacaaaaaaaggggagttgagcatcatc
cccattgagatgaccctgctgtcaccttgtttgcacatgttgccccacctccattttggt
ctcaaagacaaggaaacacgattccgtcagcgctacctggatctgatcctcaatgattat
gtgaggcagaagtttataacacgctccaaaatcattacatacctgcgcagcttcctggac
cagctgggatttttggagattgagacaccaatgatgaacattattcccggtggagcagtg
gcccgtccatttgtaacttaccacaatgagctggatatgaacctgtacatgaggattgct
cctgagctgtaccacaagatgcttgtggttggtggcatcgacagagtgtatgaggttggg
cgtcagttcaggaatgaaggcatcgatcttactcataatccagagttcaccacctgtgaa
ttctacatggcatatgcagattaccacgacttgatggacatcacagaaaaactactgtca
ggaatggtgaagcacatcactggaggatacaaggtgacttatcaccctgatggtccagag
ggacaggcctatgagattgatttcactccaccattcagaagagtgagcatgacacacgac
ctggagaagattatgggagtcaaattcccacctactgacagctatgacagtgctgagact
cgtaaattctttgatgagctgtgtgcccagaagggagtggaatgtcctccacccagaacc
actgcccgcctccttgacaagctggtcggagatttcctcgaggtcacctgtatcaacccc
acattcatttgtgatcaccctcaaatcatgagtcctttagcaaaatggcacagatcagag
aaaggcctaacggagcgttttgagctcttcgtgatgaagaaggagatctgcaatgcgtac
actgagttgaatgatccagttagacagagggagctttttgagcagcaatccaaggccaaa
gctgagggcgatgatgaggccatgttcatcgacgagaccttctgcacagcactggaatat
ggactaccaccaactgctggctggggaatgggcattgatcgtctcaccatgttcctcact
gactctaataacatcaaggaggtgttgttgttcccagccatgaagcctgatgacaataag
acatcagcaccctcagagggcacctctgtgtaa
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