Scomber japonicus (chub mackerel): 128359235
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Entry
128359235 CDS
T09718
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128359235 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128359235 (myo5c)
04131 Membrane trafficking [BR:
sjo04131
]
128359235 (myo5c)
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128359235 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128359235 (myo5c)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128359235 (myo5c)
mRNA cycle factors
P-body specific factors
128359235 (myo5c)
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Myosins
128359235 (myo5c)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128359235 (myo5c)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128359235 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ERM_helical
AAA_22
Myosin_N
Csm1_N
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
128359235
NCBI-ProteinID:
XP_053175662
LinkDB
All DBs
Position
5:complement(11648465..11660124)
Genome browser
AA seq
1742 aa
AA seq
DB search
MALLELYTEYNRVWIPDAEHVWISAEIMRDFLLGDNTLELLLEDGTEHYYPIEPSKPKLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRHRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQLCSCAQLPEFENLRLLSADEFRYTCLGGDIAIEGID
DKKEMEETQRTFSLLGLKEDFQSDVFKVLAAILHLGNVEIKNSGDDKSSVPSSDPHLAVF
CELLGVSAAGLVRWLCHRRIILVAETVVKPVSEHRAVNARDALAKQIYANLFDCIINRIN
TALQVPGKQYAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLYNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCKGFLEKNRDALYEELIDIMRASKFPFLANFFQEEEQNPLS
FKGVKVRAARPGVKPTNKQLRSSVGDKFCNSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYNEFYSRYSILMTHQEAGINDKKQTCKDV
LQRLIHDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRKYMRIR
QAAIIIQQYIRGKRTIRKTVSAATLKQGWATLVIQRYWRGYRMRQIYKVVLVASITIQAF
TRGWMARKCYKKMMEEQKALVIQKYARAWLARRRFQTMRRLVINVQLSFRVQQLRKKIDE
QNKENRGLMERLTSLANSHSQTVDKLQGLEAQLEKSSNQKASLEAREKKGKEDASVAIAQ
LQSGIDALTLEKQNLEKKFEASTKEAKESFDQIKTNLLEEKENEARLRKIAENNIEIQKQ
DHEKEVETLKDEIKKLKEERVSLRRKMEEEGQVNSDLQEQVIQLSKHVKVIPELRRDLNN
LQNQNNNMDRKMKEQSEQARGKMKEITRHLLGGVVEQEVLLGLTQDDSEKMCEVDDFLTV
FDGVQKATRILENHQREQKESYETQVEGLKLKVDHIQNENSKLQNLFQEKSNVNEKILQE
VSRLRSENSVLPELKLQVSELQRQKQELEVHVEEQNRELVEKTEEITNVLQKKLKEENSQ
RRHFEEKAEVLEELKRDLQCKVEELQEENDHLRRQNMMESEAKSRLRQEASQLTAENMDF
EEQLDHKDRLIKKLQSQIKSLETSHKAKHTPTPANPKDYLGMFEYKRVDESKLIQNVILD
LKPKGVVVNMIPGLPAYILFMCVRHADYLNDDAKLKSLMNAIISTIKKVIMTYHKDFELL
SFWLSNTYQMLNCLKQYSGEEEFMKQSTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQFI
TIMEKTLTPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSEAYTISFIVQQLSHFHS
TMSQHGMEQGLIKQVIKQLFFLIGAVTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
DLQSSNAIDTLKPLSQAAWLLQVNKSTDEDAKEITEKCTELNPVQIVKILNSYTPIDDFE
KRVASSFVRKVQSLLQDRDGSTQLMLDTDYRFQVMFPFCSSSQALELLQLPSSLHLGFLT
RV
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctttactggaactgtacacagagtacaacagagtgtggatcccagatgcagaacat
gtgtggatatcagcagagattatgagagacttcctcttgggggataatactcttgaattg
ctgctggaagatggcactgagcactactaccccattgaaccgtcaaaaccaaaactccct
cctctccgcaacccggacatcttggttggggagaatgacctcacagctctcagctacctg
catgaacctgcagtcctgcacaatctcaaagtgcgatttgtggagtccagaatcatctat
acctactgtggtattatactggtggctgtaaatccctacaaacagctccatatctacgga
gatgcaatcattcacgcgtactcgggccagaacatgggagacatggaccctcacatattt
gcagtggcggaggaggcctacaaacagatggccagaaacaacaagaaccagtccatcatt
gtcagtggtgaatctggagccggtaaaacagtgtctgctcggtatgcaatgagatacttt
gctgttgtgagcaagtctggcagtaagactcgagttgaggacaaagtcctggcatccaat
ccaataacagaggcaataggaaacgcaaagacaaccaggaatgacaacagcagccgtttt
gggaaatacaccgagatcagctttgacaggaggcaccggattatcggcgctaatatgagg
acttacttgttagagaaatccagagtcgtttttcaggcagacaacgagaggaattatcac
atcttctatcagttgtgctcctgtgcacagctgccagagttcgagaacctaagactgttg
agtgcagatgagtttcggtacacctgcttgggtggtgatatcgctatcgaaggaatagat
gacaagaaagagatggaagagactcaacggaccttctcactgctggggctgaaggaagac
ttccagtctgatgtctttaaagttttggcagccattctacatttgggtaatgtggagatc
aagaactctggagatgacaaatcatcagttccttccagtgatccacacctggcagtcttc
tgtgagttgttgggtgtgagtgcagcggggttggtgcgttggttgtgccatcggaggatt
attctggtggctgagacggtggtgaagccagtttccgaacaccgggcggttaacgccaga
gatgccctcgccaagcagatctacgctaacctgttcgactgtattatcaacaggataaac
acagcgctgcaggtcccaggaaagcaatatgccttcataggtgttctggacatttatggc
tttgaaacctttgacatcaacagctttgaacagttttgtatcaactatgcaaatgaaaag
cttcaacagcagtttaacctgcatgtgttcaagctggaacaagaggagtacatgaaagaa
gacatcccatggacgctgatagatttctatgacaatcaacccgtcattgacttgatcgaa
gcaaagatggggatcctggacttgcttgatgaagaatgtttgtttcctcaaggcactgat
caaagctggctgcaaaagctgtacaactacctagacgccaatcctctgtttgagaaaccc
aggttatcaaatgaggcgtttgtgatacaacactttgcagacaaggtggagtatcaatgc
aaaggttttctggagaagaaccgagatgctctctatgaagaactgattgacattatgaga
gccagtaagtttccttttctggccaactttttccaagaggaggagcaaaaccctctgagc
tttaaaggtgtcaaggtgagggctgccaggccaggagtgaaaccaaccaataaacagctg
agaagctctgttggagataagttctgcaactccctctccttactgatggaaacactgaat
gctacaacccctcactacgttcgctgcattaagcctaacgatgaaaagctcccgtttgaa
tatgactccaggagggtggtgcagcagctacgagcctgtggagtccttgaaactattcgt
atcagtgctcagagctacccgtccaggtggacatacaatgagttttacagccgatacagt
atcctaatgactcatcaggaggcaggcatcaatgacaagaagcaaacctgcaaggatgtg
ctgcagaggttgattcatgactccaaccagtacaagtttggtcgtacaaagatcttcttc
cgagctggtcaggtagcttatctagagaagctacgtctggaccgactcagaggagcctgc
gttaccatccagaaacacgtccgagggtggagccagaggaggaagtacatgcgcataaga
caggcagccatcatcatccaacagtacatccgagggaagaggacaatacgtaaaacagtg
agtgctgcaacactgaagcagggctgggctacacttgtgatccagagatattggagaggt
taccgtatgagacagatctataaggtagtcctcgtggcctccatcaccatccaggctttc
acacgaggttggatggcccgtaaatgctacaagaagatgatggaggagcagaaagctttg
gttatacagaagtatgccagagcgtggctggcaaggcggcgatttcaaaccatgcgtcgc
ctggtgattaacgttcagctttcctttagggttcagcagctcagaaagaagattgacgag
cagaataaagagaaccgtgggttgatggaaagactgacaagcttggccaactcccattct
caaaccgtggacaaacttcagggtctggaggcacagctggaaaaatcatccaaccagaag
gcatctttggaagcaagagagaagaaagggaaagaagatgctagtgtggcaatcgcccag
cttcaaagtgggatagatgcactaacccttgaaaagcagaacttggagaaaaagtttgaa
gcttccaccaaagaagcaaaagagagcttcgatcaaataaagacaaatcttctagaagag
aaagaaaatgaagcaagacttagaaaaatcgcggagaacaacattgagatccagaagcag
gaccacgagaaagaggtggagactctgaaagatgagataaagaaattgaaagaagagaga
gtgagtctgcggagaaagatggaggaggagggccaggtgaactctgacctacaggaacag
gtcatccagctcagcaagcatgtcaaagttattccagagctacgcagagatctgaataat
ctgcaaaatcagaataataacatggaccgtaagatgaaggaacagtcagaacaagcaaga
ggtaaaatgaaggagataacgagacaccttctcggcggtgttgttgaacaggaagttctt
ttggggttaactcaagacgactctgagaagatgtgtgaagttgatgatttcctgacagta
tttgatggcgtgcagaaagctaccagaatactggaaaaccaccagagggagcaaaaggaa
agctatgagacccaagtggagggcttaaaattaaaagtggaccatattcaaaatgagaac
agcaagctgcaaaacctgttccaggagaaaagtaatgtcaatgagaaaatactccaagag
gtgtccaggctcaggagcgagaactcggttctacctgagctgaaactgcaggtttcagag
ctgcaaagacaaaagcaagagcttgaggtccatgtagaggagcagaacagagagttagtg
gaaaaaacagaagagatcaccaatgtccttcagaagaagcttaaagaagagaattcacag
cgcaggcactttgaggagaaagctgaagtgctagaggagctgaagagggaccttcaatgc
aaagtagaggagctgcaagaggagaatgatcacttgagaagacagaacatgatggaaagc
gaggctaagagcagactgagacaagaggcttcacagttaactgctgagaatatggatttt
gaagagcagctcgaccacaaggacagattaataaagaaactccagagtcaaataaagagt
cttgaaacatctcacaaagccaaacacacgcctacacctgctaatcccaaagattacctc
ggcatgtttgagtacaagagagtggatgaatccaagctaattcagaatgtcatactggat
ctgaagcctaaaggtgtggtggtcaacatgatcccgggtctgccagcttacatcctcttc
atgtgtgtccgccatgccgactacctgaacgatgacgccaaactcaaatctcttatgaat
gcaattattagtactatcaaaaaggtcatcatgacttaccacaaagactttgagttgttg
tcgttctggctgtccaacacgtaccagatgctcaactgtctgaagcagtacagcggggaa
gaggagttcatgaaacaaagtactcctcgtcagaagaagaactgcttgcagaattttgat
ttgtccgaacaccggcagattctcagcgaccttgccatccatatctatcaccagtttatc
actatcatggaaaaaaccctcactcctgccatcgtacccggcatgctggagcacgagagt
ctacaagggatttccagcatgaagccaacaggattcaggaagcgttccaacagcatctac
gaggactcagaggcctacaccatctccttcatcgttcagcagctcagtcactttcactcc
accatgagccagcacggcatggagcaaggtctcatcaaacaggttatcaagcagctgttc
ttcctcatcggtgcggtcaccctcaacaacatcatgctccgcaaagacatgtgctcctgc
aggaaagggatgcagatcagatgtaacatcagttacctggaggagtggctgaaggagaag
gacctccaaagctctaacgccatagatactctgaagcccttgtctcaggctgcttggctc
ctgcaagtcaacaagtccactgatgaggacgccaaggagatcacagagaaatgcactgaa
ctcaaccccgttcagattgtcaagattttgaattcgtacacacccatcgatgacttcgag
aaacgggtggcgtcatcatttgtccgcaaagttcagtcacttctacaagatcgtgacggg
tccacacagctgatgctggacacagattatcgttttcaggtcatgtttcctttctgctcg
tcctcacaggctctggagctgctgcagctcccgagcagccttcatctgggcttcctcacc
agagtctga
DBGET
integrated database retrieval system
