Scomber japonicus (chub mackerel): 128359283
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Entry
128359283 CDS
T09718
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128359283
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128359283
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
HTH_SB
DUF6115
HTH_28
Motif
Other DBs
NCBI-GeneID:
128359283
NCBI-ProteinID:
XP_053175718
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Position
5:complement(34907475..34938016)
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AA seq
432 aa
AA seq
DB search
MPQKDYRSQTSWETGVASMMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWE
IRDRLLAEGVCTNDNIPSVSSINRVLRNLASDKQQMGTVGPEGMFDKLKMLNGQTSWGGR
SGWYAGTTLTTTECPQAEGGENTLSVNSNGEDSEETQMRLQLKRKLQRNRTSFTQDQIDA
LEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQVSNSSNH
IPISSSFNTSVYQPLPQPTTPVSFSSGSMLGRSDPVLSNSYSLPAMPSFSMAASLPMQTS
NQTSYSCMLPTSPTVNGRSYETYTPPHMQPHINSQSMTSATSSTGLISPGVSVPVQVPGS
EADMSQYWPRLQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaaagattatagaagtcaaaccagctgggagaccggagtggcctccatgatg
caaaacagtcatagtggagtaaaccagctgggaggtgtgtttgtgaatggcagaccttta
cctgactcgaccaggcagaagatagtggagctggcacacagtggagctcgaccctgtgac
atatccagaatactacaggtgtctaatggctgtgtgagtaagatcctgggccggtattac
gagactggttcgatccgtcctcgcgcaattggaggaagtaaacccagggttgcaactcca
gaggtggttggcaagatcgctcagtacaagagagagtgtccgtccatctttgcctgggag
atcagagaccgactgctggcagagggagtctgcaccaatgacaacatacccagtgtttca
tcaataaatcgagtgctcaggaatttggccagtgacaagcagcaaatgggcacagtggga
cctgaagggatgtttgacaaactcaagatgctcaatggacaaactagctggggaggacgt
tcagggtggtatgctgggactacactcactaccactgagtgtccacaggcagaaggaggg
gagaacacattatcagtaaattccaacggtgaggattcagaggagactcagatgaggctt
cagctgaagaggaaactgcagagaaacagaacatcattcacacaggaccagatagacgca
ctggagaaagaatttgaaaggactcattatccagatgtgtttgcccgagaacgccttgca
aacaaaatagacctaccagaggcgaggatacaggtttggttttcaaacagaagagcaaag
tggagaagggaagagaagctgagaaatcaacgtcgccaggtgtccaactcatccaaccat
attcccatcagcagcagcttcaacaccagtgtttaccagcctctaccacaacctactaca
ccagtgtccttctcatcaggatccatgttgggaagatcagatccagttctgtctaacagc
tacagcctcccagccatgccaagcttcagtatggctgccagcttgcccatgcaaacatcc
aatcagacctcttattcctgcatgttgcccaccagtccaactgtaaatggaagaagttat
gagacgtatacccctccacacatgcaaccacacatcaacagccagtcaatgacctctgca
acatcgtcaacaggtctgatttctcctggtgtctcagttccagtgcaagttccaggaagt
gaagcggacatgtcacagtactggccacgtctgcagtga
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