Scomber japonicus (chub mackerel): 128359288
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Entry
128359288 CDS
T09718
Symbol
man2c1
Name
(RefSeq) alpha-mannosidase 2C1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
128359288 (man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128359288 (man2c1)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
128359288 (man2c1)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
128359288 (man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Glyco_hydro_2_N
DUF237
Motif
Other DBs
NCBI-GeneID:
128359288
NCBI-ProteinID:
XP_053175725
LinkDB
All DBs
Position
5:complement(16495146..16503289)
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AA seq
1049 aa
AA seq
DB search
MWVYLPWFSVQYSSVVQTCNCVYVEFVMYHQPVLKNRRTLLERAEKFISDIYFTDCNLRG
RLYGESCPLESLSSFLSPKRITFTEASKQNFAPYKVGDTFGPTWWTCWFKVTLKIPESWR
GKEVHLLWESDGEAMVWRNEQPVQGLTKDGEKTSYVLTDCLKEEEPHSVILYVEMACNGL
FGAGQGSMIAAPDPIRKFSVQKAELVVFNRDVRELVTDFEMLVDIVKELGEGEQRGYQAL
FTVNEMVNLCDPSDPSSFSKAHSLAHNFFSQRNGQSQHTVHAMGHCHIDSAWLWPYEETI
RKCGRSWVTVIRLMEKNPDFVFTCSQAQQFQWVKNWYPGLYSQIQHYVKKGQFIPVGGTW
VEMDGNLPSGESMVRQFLEGQRFFEKEFGILCKEFWLPDTFGYSAQLPQIMQGSGIGNFL
TQKLSWNLVNTFPHNTFFWEGLNGSKVLTHFPPGNSYEMKGKVEDLVKTVKHNKDKGRAN
HSAVLFGFGDGGGGPTQLMLDRLQRIQDTDGLPKVLMSSPDKLFSQLQHDSALLCTWTGE
LFLELHNGTYTTQAQIKQGNRQCETLLHDIEIASSLALCRDKTFQYPMEKLRELWRLLLL
NQFHDVIPGTCTEMVVEDALRYYEDIRSDGATLLRDSCGALVSKGNSTAVFNSLPWERQE
VIQIQDGAGKPGLALVRVPSIGLTPVKDTQPVTPVCVTAQADGTVVMENGILQTVINKDG
TLASLFLMNTNREAISDGCHGNQFVMFDDVPLYWDAWDVMDYHLQTRKPVLEVVQPVHVV
SSDGLQGRVSFTLRISDKSTVTQEIVMDAMCPYIKFNTQVKWAESHKFLKVEFPVRVRSP
NATYEIQFGHLQRPTHRNTSWDWARFEVWGHKWADLSEHNFGVALLNDCKYGYSVHENTM
TLSLLRAPKAPDTNADMGTHHFTYAVMPHTGSFQDASVIQSAYNLNFPLRLIQCSPDTLP
FSAFSISTTAVILETVKQAEDRKGALVVRLYESHGSSVTATLNTALKIREAWHCDFLERQ
DLTQPAHITSDGITLNFSPFQIVSLLLIL
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtttatcttccgtggttttcagtgcagtactcttctgtcgtgcaaacctgcaat
tgtgtatatgttgagtttgtcatgtatcaccagcctgtgctgaagaacaggcgcactctc
ctcgagagggcagagaaatttatttctgatatatatttcacagattgcaatctgagagga
cgactatatggagaatcttgcccgctggaatccctctcctctttcctttcccctaaaagg
atcacattcactgaagcctccaagcagaactttgcaccttataaagtcggtgataccttt
ggaccgacgtggtggacttgctggtttaaagtgaccctgaaaatccctgagtcctggaga
ggaaaagaggtccatcttctgtgggaaagtgatggagaagcgatggtttggagaaatgaa
cagccagttcagggtctgactaaagatggtgaaaagacaagttatgtcctaactgactgc
ctcaaagaggaagaaccacacagtgtcatcctttatgtagaaatggcttgtaatgggctt
tttggagctggtcaagggtccatgattgcagccccagatccaatcaggaagttttctgta
cagaaggctgagctggtggtatttaaccgggatgtaagggaactggtgactgatttcgag
atgcttgttgacattgtaaaggaactcggagagggagagcagcgaggctaccaggcactc
tttactgttaatgagatggtgaacctctgtgacccctctgatcccagctctttctccaaa
gcacacagtctggctcacaacttcttcagccaaaggaatggacaaagccagcacactgtg
catgcaatgggccattgccacatagactcagcctggctgtggccctatgaagagaccatt
cgtaaatgtggccgaagctgggtgacagtgatccgactgatggagaagaacccagatttt
gtgtttacttgctctcaggcccagcagttccagtgggtaaagaactggtacccgggactc
tactcccagattcagcattacgtcaagaaaggccaattcattccagttggaggaacatgg
gtggaaatggatggcaatcttccttcaggtgaatccatggtcaggcagttcctggagggc
cagcgcttctttgaaaaagagtttgggatcttgtgcaaagagttctggcttccagataca
tttggctactctgcccaacttccacagataatgcaaggctctggaattggcaatttcttg
acacagaaactcagctggaacctagtcaacaccttccctcacaacactttcttctgggaa
ggcctcaatggctccaaggtcctaactcatttcccaccaggaaattcctacgaaatgaaa
ggcaaggtcgaagatctggtgaaaactgtgaagcacaacaaagacaaaggcagagccaat
cacagtgcagtgctgtttggttttggtgatggtggcggtggacccacacaactgatgcta
gatagactccagcggatccaggacacggatggacttcccaaggttctgatgtcgagccct
gacaagctcttctctcagcttcagcatgactcggctctgctgtgtacttggactggagag
ctcttcctagagctacacaatggcacctacaccacacaggcacagattaagcaagggaac
cgccagtgtgagacgctccttcacgacattgagatagccagcagcctggcgctgtgtcgg
gacaagacttttcagtatcccatggagaagctgcgggagctctggaggctgcttcttcta
aaccaattccatgacgtcatccctggtacttgtacagagatggttgtggaggatgcactc
aggtattatgaagatatccgtagtgatggtgccacactgctgcgtgattcctgtggtgcc
ctggtctcaaagggcaactccaccgctgtgttcaactctctgccgtgggagcgccaggaa
gtcatccagattcaagatggcgctggtaaacctggcctggctctggtgagagtccccagc
atcggtttgactcctgtcaaagacacgcagcctgtgactccagtctgtgttactgctcag
gctgacggcactgttgtcatggaaaatgggattttacagaccgtcatcaataaagatggc
actttggcttcactgtttttgatgaatacaaacagagaagctatctctgatggctgtcat
ggcaaccagtttgtcatgtttgatgatgtccccctatactgggatgcctgggatgtaatg
gactaccaccttcagacaaggaagccggtgctggaggtggtgcagccggttcacgtggtg
tcctcggacgggctccaaggcagagtcagcttcactctgaggatcagtgacaagagcact
gtcacacaggagattgtcatggacgccatgtgtccttacatcaagtttaacacacaggtg
aagtgggcagagtcacacaagttccttaaggtggaattccctgtgcgagtacgcagtccc
aacgctacatatgagatccagtttggccatctgcagagacccacacacaggaatacttca
tgggactgggccagatttgaggtttggggtcacaaatgggccgatctgtcggagcacaat
tttggagttgcactgctgaatgactgcaaatacggctattcagtacacgagaacacaatg
acactatccctgcttagagcaccgaaggccccagataccaatgctgatatggggactcat
catttcacttatgcagtcatgccacacacaggttccttccaagatgcctctgtcatccag
tctgcatacaacctaaacttccctttgaggctgatccagtgctctcctgacactttgccc
tttagtgccttttccatcagcaccacagcagtcattcttgagactgttaaacaggcagag
gacaggaagggggcacttgttgttagactgtacgagtcgcacggaagcagcgtgactgca
actctcaacacggcccttaaaatcagggaagcctggcattgcgatttcttggagagacaa
gacctcacccagccagcacatataacatcagatggaatcactctgaacttcagccccttc
caaattgtctcacttcttctcattttgtaa
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