Scomber japonicus (chub mackerel): 128359384
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Entry
128359384 CDS
T09718
Symbol
cald1b
Name
(RefSeq) caldesmon 1b
KO
K12327
caldesmon
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
128359384 (cald1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128359384 (cald1b)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
128359384 (cald1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
128359384
NCBI-ProteinID:
XP_053175853
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All DBs
Position
5:13704597..13724205
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AA seq
698 aa
AA seq
DB search
MDDDFDRRMEQRRQRREQMRTDTEKGGIANDDDEEEARERRRRAREERKKMRDPEDCGTG
DVINTNSVTETESSTTATEGTDDDQALLERLAKREERRKRRMQEAMERQKELDPTIGTTN
GTDSTLEEQSSISSSRQQHTEEDEQKKEEKPSQEEVADAETNSWRKEEEDKKEEEKEETE
QPDLAKKDVEEEAVPDVDKEEEERKRKEEEERQQKENEEKLRIEEEERQKKEMEEKLKKE
EEERQLKEEEERKKRAEEEKRQNEMEESLKKEEEEKQKRAMEENKKKEEEKQKKEMEEKK
KKEEEEKHKKELEEKRKKEEEEKLKKKELEEKKKKEEEERRKKEMEEKKKEEEEKRKKEV
EEKKKKEEEDKRKKKEVEEKKKKDEEEKLKKFGFKEKNEPNQTKQNGAFIENKLKKTEKT
SSAPSSSLSKTEVERQEAERKLLELKRRRNDAESEEFEKMKQKQQGAEAELEELKKKREE
RKKILEEEEKQKKQELEDKKAKEQEERKRMKEEIEKRRAEAAEKKKQKEEESVKISFTVS
PKGSSKIGEKAGFLSKSAQKSIPRVSHTPIVSKIGNRMEQYASAIQGNKEVGKSPKSPMA
DIPTGGTRSIKSMWEKGNVGSSSESPSPANKDLAGIKGGVAGRVNSWMAKPPEAEKTTPA
PAAPAASPAKPADVKPGDVGNKRGMWETKKSSTPAKST
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgactttgatcgccgcatggagcagaggaggcagaggagagagcagatgcgc
accgatactgaaaagggcgggatcgccaatgatgacgatgaggaagaagctagagagcga
aggagacgtgcaagggaggagaggaagaagatgagggacccggaggattgtggaactggg
gatgtgatcaacactaacagtgtgacagagactgaatcctccaccactgccactgagggg
acagatgatgaccaggctttgctggagcgccttgccaagagggaggagcgcaggaagagg
agaatgcaggaggccatggaaagacagaaggagctcgaccccaccattggcaccaccaac
ggcacagatagcacactcgaagagcagtcctccatcagcagcagcagacagcaacacaca
gaggaagatgagcagaaaaaggaggagaaaccatcccaagaagaggtggcagatgctgag
actaactcctggaggaaagaagaagaagacaagaaggaggaggagaaggaggaaactgag
cagcctgatttagcaaagaaagatgtggaagaggaggctgttcctgatgttgataaggag
gaagaagaaaggaaaaggaaagaagaagaggaaagacagcagaaagaaaatgaagaaaag
ctgaggatagaggaagaggaaaggcaaaaaaaggaaatggaggaaaagctcaaaaaggaa
gaagaagaaagacagctaaaggaggaggaggaaagaaagaagagagcagaagaggaaaaa
cgacaaaatgaaatggaagagagcctgaaaaaagaggaagaagaaaaacagaagagggca
atggaggaaaacaagaaaaaagaagaggaaaaacagaaaaaggagatggaggaaaagaag
aagaaagaagaggaggaaaaacacaagaaagaattggaagagaagaggaaaaaggaggag
gaggaaaagctgaagaagaaagagctggaggagaagaagaagaaagaggaggaggagaga
cggaaaaaggagatggaagaaaagaagaaagaagaggaggagaagcggaaaaaggaggtt
gaagagaagaagaagaaagaggaggaggacaagcgcaaaaagaaagaggtggaagagaag
aagaagaaagacgaggaggagaagctgaagaaatttgggttcaaagaaaagaatgaacca
aaccaaaccaaacagaacggagccttcattgagaataaactcaagaaaacagagaagaca
tcaagcgctccctcctcctccctctctaaaacagaggtggagcgacaggaagctgagcgt
aagttgctggagctgaaacgccggcgaaacgatgcagaaagcgaagaatttgaaaagatg
aagcagaagcagcagggtgcggaggctgagctggaggagctgaagaagaagagagaggag
aggaagaagatcctagaggaggaggagaagcagaagaaacaggagctggaggacaagaaa
gccaaagaacaggaggagaggaagaggatgaaggaggagatagagaagaggagggcggag
gcggcagagaagaagaagcagaaggaggaagagtctgtcaaaattagcttcactgtcagt
cccaagggctcctctaagattggagaaaaagcaggattcttgagcaaatcagctcagaaa
agcatacccagagtgtcacatactccaattgtctccaagataggcaacagaatggaacag
tacgcttctgccatccagggaaacaaagaagtgggcaagtcccccaagtctcccatggca
gatattccaacaggaggcactcgcagcatcaagagcatgtgggagaaaggcaacgttggc
agctcctctgaaagtccatcccctgcaaataaggacttggccggtatcaaaggaggcgtc
gctggacgtgtcaacagttggatggcaaagcctccagaggcggagaagacaacaccagca
ccagcagcaccagcagcatcaccagcaaagcccgcagatgtgaaaccaggtgacgttggt
aacaagcgtggcatgtgggaaaccaagaagagctctacacctgccaagtctacctaa
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