Scomber japonicus (chub mackerel): 128359407
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Entry
128359407 CDS
T09718
Name
(RefSeq) ras-related protein Rab-8B-like
KO
K07902
Ras-related protein Rab-8B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128359407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128359407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128359407
04031 GTP-binding proteins [BR:
sjo04031
]
128359407
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
128359407
Autophagy
Xenophagy
Other xenophagy associated proteins
128359407
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128359407
Exosomal proteins of other body fluids (saliva and urine)
128359407
Exosomal proteins of colorectal cancer cells
128359407
GTP-binding proteins [BR:
sjo04031
]
Small (monomeric) G-proteins
Rab Family
Rab8/10/13 [OT]
128359407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
DUF3963
PduV-EutP
AAA_7
Motif
Other DBs
NCBI-GeneID:
128359407
NCBI-ProteinID:
XP_053175876
LinkDB
All DBs
Position
5:16661281..16663304
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AA seq
231 aa
AA seq
DB search
MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQ
IWDTAGQERFRTITTAYYRGAMGIMLVYDICNEKSFENIKNWIRNIEEHASSDVEKMILG
NKCDMTDRRQVSKDRGEKLAIDYGVKFLETSAKSSLNVEEAFYTMGRDILHNLSSKTTDN
NAGGSGKPVKITEKKSKRIKFFKCVLVAAASAAAADVIFRRPYCQLKLTGS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacgtacgattacctcttcaaactgttgctcatcggagacagcggagtcggc
aagacatgtctgctgttcagattcagcgaggactctttcaataccaccttcatatccaca
ataggaatagacttcaaaatcagaacaatagagctggatggaaagagagtcaaacttcaa
atatgggacactgcagggcaggagaggttccgcaccattactacagcttactacagagga
gcgatgggaatcatgctggtctatgacatctgcaatgagaagtcctttgaaaacataaaa
aactggattagaaatattgaagagcatgcctcatctgatgttgagaagatgatcctgggt
aacaaatgtgacatgactgacaggagacaggtgtccaaagacagaggtgaaaaactggct
attgattatggagttaagttcttggaaaccagtgcaaagtccagtttaaatgtagaagag
gctttttatacaatgggaagagacatattacacaatctgagttcaaagacaactgacaac
aacgctggaggatcgggcaaaccagtcaagatcacagagaaaaagtcgaagagaattaaa
ttcttcaagtgcgtccttgtagcagcagcctcagcagcagcagcagacgtcatattcaga
aggccttactgccagctgaagctcacaggttcatga
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