Scomber japonicus (chub mackerel): 128359530
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Entry
128359530 CDS
T09718
Symbol
ripor1
Name
(RefSeq) rho family-interacting cell polarization regulator 1 isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128359530 (ripor1)
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128359530 (ripor1)
Cilium and associated proteins [BR:
sjo03037
]
Other cilia and associated proteins
Stereociliary proteins
128359530 (ripor1)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
128359530 (ripor1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
FAM92
HR1
Motif
Other DBs
NCBI-GeneID:
128359530
NCBI-ProteinID:
XP_053175995
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All DBs
Position
5:32908167..32975860
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AA seq
1106 aa
AA seq
DB search
MYSGYGGSPSRTLSTMSLSVRPVRRLTSRSITRSQSFTGVNTYDKPYRNLSVFSTPGLSR
KPSRASRMFTTSNKSNPPPKVPQPERVDEVYEALKTGLQSYLQVHQMDLENLSRQMKESK
RNSRLGFLYELDKQVKMTERYIRRLEFHLSKIEELYEAYCMQRRLRDGANKMVKAYTASP
GSKEARESLAEANKGYKEYTENMCVLENEMENQLGEFHIKMKGLAGFARLCAGDQYEIFM
RYGRQRWKLRGRIEINAKQVWDSEDMVFLPLINEFLSVKVTELKSLANHVVVGSVSCETK
DLFAALPQTVAVDINDLGTIKLSLEVTWNPFDKDDQGSVASTVNKAPTVSKRFSTIFNQS
PPDTPSLREQAFYNMLRRHEELENGTAWSNSSESSDDSSSPQLSAGGLRNSTQPKAVVTP
EVQPAGSSYPQPDISFCPRDSASSTPNSTHKSSDTPNTSKHQADSSREEEKSEVTGTTKP
ESEEEDAGTQSPIETVEVGLSNSHTPRCYSRSLSHISESSADGVVLTDRSTGESGEVMSL
TSGISINDIEMEMPSRTPEPTDSVATDTDMSPRKLGDAEENATAVDDTDSDGQHPIEEEQ
DTLVTVIGSTTASADGVDSNTSSEVNTQPELECSTLEESGDVTYVAHRVSVEEEGAGAGA
DCLSREGNMLVDSGLEDALGNVVSSLDDYRGQFPELQLLEQELKLLQVTLKGGRHSRSPS
VVSLTVETALGSFDFLNTSDWEEEEDERGERRNRNGRSLQDRGWDSPSSSPTCPLTSGCT
TLDCTLVVHLKNCSAQLLRLGMFGPLRCGEMYALDRLLREARVLEIARRVTKENPRRSRQ
PVEVIPQLGLCTGAASLWQQCVGQGSVYSVSADSFLVTLSTVYSSILPDRASSMADSVFL
CLAERVLDQRLPRRGGNRDKVMVTLFQLWSYLEANGITDMETHITELAEEVWLVQSLASC
DQDVIVHALRRPPECSLRREGLHAVAKLLKDPRGKVSASASSVLRSLAAQPRQREQALVS
CLELLEDENVETRVCGCKALACLKAKESIDQLVYLCRTDKEEVRDAAKQALLVLGEEGKM
AHRHVEMSQDGIPRLFAPGSMASTAF
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtggatatggagggagtccatcccgaactctctccaccatgtcgctgtctgtt
cggcctgtcagacgcctcacctccagatccatcactaggagccagagcttcactggagtc
aacacctacgacaagccctacaggaacctctcagtgttcagcactccaggtctcagcagg
aagcccagcagagccagcaggatgtttactacgtccaacaaatccaacccgcctcctaaa
gtccctcaaccagagcgagtggacgaggtctacgaggctctgaagacaggcctccagtca
tatctgcaggttcatcagatggacttggaaaatctgagtagacagatgaaagaatcaaag
aggaactccagactgggtttcctgtatgaactggacaagcaagtgaagatgactgagagg
tacatcagacgactagagttccacctcagcaagattgaggagctgtatgaagcatactgc
atgcagaggagactcagggacggagccaacaagatggttaaggcatacactgcctctcca
ggcagtaaggaggccagagagagtctagcagaggccaacaaaggatacaaagagtacaca
gagaacatgtgtgtgctggagaacgagatggagaaccaactgggagagttccacattaag
atgaaaggtctggctggatttgctagattgtgtgctggtgaccagtatgagatttttatg
aggtatggtcggcagcgatggaagcttcgaggcagaatagagatcaatgccaagcaggtg
tgggacagtgaggacatggtgttcctgcctcttatcaacgagttcctctctgtaaaggtg
acggagctgaagagcttagccaatcacgtggtggtgggaagtgtttcctgtgagaccaag
gacctatttgctgctttaccccagacagttgctgtggatattaatgacctggggaccatt
aagctaagcctcgaggtcacctggaatccgtttgacaaagatgaccaagggtcagtggcc
agcactgtcaacaaagctccaactgtcagtaagagattctcaacaatcttcaaccagagt
cctcctgacacgccatctttacgtgaacaagccttctataacatgctccgccgtcatgaa
gagttagagaatggaacagcatggtccaactcttctgaatcctcagatgattcctccagt
cctcagctgtctgcaggagggctccgcaactccacacagcccaaggcagtggtgacacca
gaggtccagccggcaggaagttcctacccgcagcctgacatctcattttgccccagagac
tccgcttcctcaactccaaactccacccacaaatccagcgacactcccaacacgtccaaa
caccaagcagacagcagcagggaagaggagaagagtgaagtcactgggacaacaaaacct
gaaagtgaggaggaggatgcagggacccagtctcccatagaaacagtggaagtagggttg
agcaacagccacaccccacgctgctactctcgctctctgagccacattagtgaaagcagc
gctgatggcgtcgtgttgacggacaggtcaactggcgaatcgggggaggtgatgtctctg
acgtccgggatctccatcaacgacatcgaaatggagatgccgagcagaactcccgaaccg
accgactctgttgccacggacaccgacatgtcaccaaggaagttaggcgatgccgaggaa
aacgcaacagctgtagatgacacagacagtgatggacaacacccaatagaagaggaacag
gatacacttgttactgtcatcggctctaccactgccagtgctgacggagtggactctaac
acttcatcagaagttaacacacagccagagctggagtgcagcacactggaagagagcgga
gatgtgacatacgtggcccatcgggtgtcagtggaggaggagggtgcaggagcaggagca
gactgtctgtccagagagggtaatatgctggtggacagtgggctggaggacgccctggga
aatgtagtctcctctctggatgattacagaggacagttccctgagctacaactactagag
caagaactgaagctgctgcaggttacactgaagggcggtaggcacagccgctctcccagc
gtggtcagcctcacagtagaaacagctctaggcagctttgacttcctcaacacgtctgac
tgggaggaggaagaggatgagaggggtgagaggaggaacagaaacggcaggtctctgcag
gacagaggctgggacagcccctcctcctcccccacctgccctctcacttcaggctgcacc
actttagactgcactctggtggtccatctgaagaactgcagtgcacaactgctgcggctg
ggtatgtttggtcctctgcgctgtggagagatgtacgctttggacagactgctgagagag
gctcgcgtcctcgaaatcgcccgacgcgtcaccaaggagaacccacgacgttcccgacag
cctgttgaagtgataccacagctgggcttgtgcacaggtgctgcgtcactatggcaacag
tgtgtggggcagggcagcgtgtacagcgtctcagctgacagcttcctggtcaccctgtcc
acagtctactccagcatactgccagacagagccagcagcatggctgactcagtattcttg
tgtctggcagagcgagtgctggatcagcggttaccacggcgaggcggcaacagagacaaa
gtgatggtgacgctgttccagctgtggagttacctggaggccaacggcatcaccgacatg
gaaacacacatcactgagctggcagaagaggtgtggctggtgcagagcctggcgtcatgt
gaccaggacgtgatcgtccacgctctgaggcgacctccagagtgcagcctgaggagagaa
ggacttcacgctgtggccaaattactcaaagacccacgaggcaaagtgtcagcctcagcc
agctctgtgctgaggagcctggctgctcagcccagacagagagagcaggctttggtcagc
tgtctggagctgctggaagatgagaatgtggagaccagagtgtgtggatgtaaagcctta
gcttgtctcaaggccaaagaaagcatcgaccagttagtgtatctttgtcggacagacaag
gaggaagtcagagatgcggccaaacaagctctgctagtgcttggtgaggaggggaagatg
gcccacagacacgtggagatgtctcaggacggcataccgagactcttcgctcctggaagc
atggccagcacagctttctaa
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