Scomber japonicus (chub mackerel): 128359548
Help
Entry
128359548 CDS
T09718
Symbol
cdh16
Name
(RefSeq) cadherin-17
KO
K06810
cadherin 16, KSP-cadherin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128359548 (cdh16)
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Major cadherins
128359548 (cdh16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
RET_CLD1
Big_9
InlK_D3
Protocadherin
Motif
Other DBs
NCBI-GeneID:
128359548
NCBI-ProteinID:
XP_053176047
LinkDB
All DBs
Position
1:complement(25580351..25607292)
Genome browser
AA seq
815 aa
AA seq
DB search
MLIIALTLVILNTFAPCAGANVKIGVPENYNGIFPWYLAKLNILPANYSDVVVTGDDEGI
FGIEAQFLYAIKPLDREKQPSYSLQVSFRTSVHRQSFTVEVCVIDKNDNVPTFIEESMRG
SVQLGLLKGIPFMQVEALDRDDRNTAHAELCFSLMEQTPRIPSSQMFFIDSITGEVSLTE
EGASALDPEMCGRYKLSVMVKDMAGRANAFFTTGIVTVEVTGNTWASPDPVRLQENLPGP
YPIPISQVKWSGSQAEYSLEGEFPEMLFTISREGVIYLNAPLDRETQDQFQISIVVERPD
GREIAKPVELRVMVGDANDNRPTFPQAQYHTVVKELAARGTEILTVQAADNDDPKTDNVR
IFYRLVGQIPESPRALFRVDRDSGVISVQADSMEGTAPQYTLTITAEDAKGLNSSCTVVV
TVHDENNNPPVFSQHEYGPFHIPEDAPVGTTVTAVMAGDADVRGGDSWQVDYRLESGNEE
EVFTLVTDKQTNEVSLVLSKVLDFERESEYILVLSAQNPVALVRGRYGPASTATVSIYVD
DINEGPILSQSHYEVTVREGEEPGRVIATIRGYDPDSHPIRYSLRGDTKKYFSIGKYSGE
LKTVQALDREENSTYTMEVIAVDGRNFSLSASTLVTVQILDVNDNSPVLVGDYSWKYLCT
PRWEDQALVLASRDSDGPQHGGRLNFSLRSDATVRRNWKLTPINDTHTNLSLNIPYLAPE
VYTVPFTISDSSSPPRSTFINLPVTVCPCNIRGNCKMAAKQLEGMPTIQSAVGILLGTFA
VIGTILIVVFVRLSYQNPKRPSKSNQERVPLKMSI
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcattgctctcacattggtgatactaaacacatttgcaccatgtgctggggca
aatgttaaaataggtgtcccagaaaactataatggtattttcccatggtacttagccaag
ctcaacatcctgccagctaattacagtgacgttgtggtgacaggggatgatgaggggata
tttggaattgaggctcagtttctgtatgccataaaaccactggaccgagagaagcagcca
tcgtattctctgcaggtgtccttcagaacatcagtgcaccgtcagagcttcactgtcgaa
gtgtgtgtcatcgacaagaacgacaatgtgcccacattcattgaggagagcatgagaggc
agcgtgcagctcgggcttctcaagggaatcccgttcatgcaggtggaggcactggaccgt
gatgaccgcaacaccgcccacgctgaactgtgtttcagcctgatggaacagacacccagg
attccctccagtcaaatgttcttcattgactccatcactggagaggtttccctcactgaa
gaaggagcctcagctctggacccagagatgtgtggtcgctataaactctcagtgatggtg
aaggacatggctgggagagctaatgctttcttcaccactggcattgttaccgttgaggtg
actggaaacacctgggcatcgccagaccctgtgcgactacaggagaacctcccaggccct
taccccatccccatctcacaggtgaaatggagtggaagtcaagcagagtacagtctggag
ggggagtttccagagatgctcttcaccatcagcagagagggagtcatttatctcaacgcc
cctctagacagagagacacaagaccagttccagatcagcattgtggtggagcgtccagat
ggcagagagattgcaaagcctgtggagttgagggtgatggttggcgatgccaatgacaac
agacccacctttccacaggcacagtaccatactgtggtcaaggaactggctgcccgaggc
acagaaatcctgacagtgcaggcagccgataatgatgatcccaagacagacaatgtgcgg
atattctaccgtcttgttggccaaattccagagagtcctcgggccctcttcagagtggac
cgtgactcaggggtcatctctgtccaagcagacagtatggagggcacggcaccacagtac
actctcaccatcactgctgaggatgctaaaggtctaaacagttcctgtacggtggttgtg
acggtgcacgatgagaacaacaacccaccagttttctcccaacatgagtatgggcccttt
cacatcccagaggatgctccagtgggcaccacagtcacagctgtgatggcaggggatgct
gatgttcgaggaggagacagctggcaggtggactaccgtttagaatctggaaacgaggaa
gaggtcttcacattggtgacagataagcagaccaatgaggtctcactggtcctgtcaaag
gttcttgattttgagcgtgagagtgagtacatcctcgtgcttagtgctcagaacccggta
gccctggtccgtggccgctacggtcctgcttccacggcaacagtttccatctatgtcgac
gatataaacgaaggtccaattctctctcaaagtcattatgaggtgactgtcagagagggt
gaggaaccagggcgagttattgccaccatccgaggttatgaccctgattctcacccaatc
agatattctcttcgaggggacactaagaagtacttttcaatagggaaatactctggtgag
cttaagactgtgcaggctttggacagagaggagaacagcacatacaccatggaggttatt
gcagtggatggaagaaacttttccttatctgcttccacactggtgactgtccaaatcctg
gacgtgaacgacaacagtccggtgttggttggggattactcctggaagtacctgtgtaca
cctcgttgggaagaccaagcactggtgctggcctcacgggacagcgatgggccgcagcat
ggaggacgactcaatttctctctgcgcagcgatgctacagtccgacgcaactggaaacta
acacccatcaatgatactcacaccaacctgtccctaaacatcccatacctggcccctgag
gtgtacactgtgcccttcaccatctctgacagcagctctccccccaggagcaccttcata
aacttgccagtgacagtgtgtccgtgcaacatcagaggcaactgcaaaatggctgccaag
cagttggagggcatgccaacaatccagtctgcagtgggcattctgcttggcacctttgca
gtcataggcactatactcattgttgtgtttgtgaggctgtcctaccagaacccaaaacga
ccaagcaaatctaaccaggagagagttccactgaaaatgtcaatctaa
DBGET
integrated database retrieval system
