KEGG   Scomber japonicus (chub mackerel): 128359624
Entry
128359624         CDS       T09718                                 
Name
(RefSeq) WD repeat-containing protein 88-like
  KO
K24757  WD repeat-containing protein 88
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sjo04990]
    128359624
Domain-containing proteins not elsewhere classified [BR:sjo04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   128359624
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_EML ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_NWD2_C WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd PEP5_VPS11_N Ge1_WD40 Beta-prop_DCAF12 Beta-prop_WDR19_1st PQQ_2 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT140_1st zf-dskA_traR Beta-prop_IFT122_1st Beta-prop_Nup120_160 WD40_like Cytochrom_D1 Nucleoporin_N KNTC1_N XPA_N Utp8_b_propeller DUF6923
Other DBs
NCBI-GeneID: 128359624
NCBI-ProteinID: XP_053176051
LinkDB
Position
1:complement(42229574..42237040)
AA seq 403 aa
MASKNIDPLSVDEPTGGEEEEDEEEEEEQRGAEWSKETQVPVKQLRAHRETVTAARLCFN
DSFLLSCSSDTTAVLWDVESCRPRRLFSGVHGKPVSECAVIPNSNRILTVSWDKKMVSWD
VETGQTLWTSRQNGLLTSCSASADGRLIVCASDPQNGVTVSDAASGQTLHHVNGHHRSTI
TRCRFDPQSQRVATASADRSVKLWDLLTLKTTVTIDSNHGNVVSDCCFTNDGRFLCTASW
DKTLQLWDLQTGAFRSHGGTTLQRGHEGSVSSCCFSTDANLLVSGSYDRTVALWDMSTLC
QSLILKGHTDWVTDVSISADRKLLCSASKDGTVRLWNIENMEEIPEVMEKRRTEGTGVHI
LKCEECGKPFPVSRLQTSELLTQCVFCRLRSPSRYRPQPPPVM
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcgtcaaaaaacatcgatcctttatcagtggacgaaccgacaggaggagaagaggaa
gaagatgaagaggaggaagaggagcagagaggagcagagtggagtaaagagactcaggtt
ccagtgaagcagctgagagctcacagagaaaccgtcactgctgctcgcctctgcttcaac
gacagcttcctcctcagctgctcctcagacaccaccgccgtcctctgggatgtggagagc
tgccggccgcggaggctgttcagtggagttcatgggaaacctgtgagtgaatgtgctgtg
atcccaaacagcaacaggatactgacggtctcctgggataagaagatggtttcctgggac
gtggagaccggacagactctgtggacgtcgaggcagaacggcctgttgacgtcctgcagc
gcctcagctgacggccggctgatcgtttgtgcttcagatcctcagaacggcgtgaccgtc
agcgacgcggccagcggtcagacgctgcatcacgtcaacggtcaccaccgctccaccatc
acacggtgccgcttcgaccctcagagtcagcgcgttgccacggcgtcggcagaccgcagc
gtcaaactgtgggacctgctcaccctcaaaaccaccgtgaccatcgacagtaaccatggc
aacgttgtctccgactgctgcttcaccaacgacggccgcttcctgtgcacggcctcgtgg
gataagacgttgcagctgtgggacctgcagacgggagcgtttcgttctcatggtgggacg
acgctgcagagaggacatgaaggcagcgtgagctcctgctgcttctctactgatgcgaac
ctgctggtgtccggctcctacgacaggactgttgcactctgggatatgtccacactctgc
cagtctctcatcctgaagggtcacactgattgggtgacagacgtgtcaatcagcgctgac
aggaagttgttgtgctccgcctcgaaggacgggacggtcagattgtggaacattgagaac
atggaggagatcccagaggtgatggagaagaggaggactgaaggaacaggagtccacatc
ctgaagtgtgaggagtgtgggaaaccgtttcctgtgtccagacttcagacctcagagctg
ctgactcagtgcgtcttctgtcgactcagatctccctccagataccgaccgcagcctccg
ccggtcatgtga

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