Scomber japonicus (chub mackerel): 128359772
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Entry
128359772 CDS
T09718
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128359772 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128359772 (cadm1b)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Nectin family
128359772 (cadm1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
KOW2_Spt5
Adhes-Ig_like
Syndecan
Motif
Other DBs
NCBI-GeneID:
128359772
NCBI-ProteinID:
XP_053176067
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Position
6:24321438..24461822
Genome browser
AA seq
423 aa
AA seq
DB search
MLLEMKCILEDGCKNSFTLSGRLKLQGHGAAETVTVEDQNLATDNVSVIEGEMATISCRV
KNNDDSVIQLLNPNRQTIYFKDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQL
YTDPPQEAYADITVLVPPGSPIIESHEDVVSEGNETELTCTAMGSKPAASIRWMKGEEEL
TGETTVEETYDRMFTVTSRVRFSVTKEDDGVPVDCIIDHPAAKDLLAQRHLEVMYKPEVK
IVVTYPEGLPREGDNLDLTCIAEGKPHPHQINWLRVDEDVPPHAVVTGADLYIENLNKSY
NGTYRCVATNAVGEAYDDYTLYVHDAPTTIPTPTTNPVNTQDSRAGEGAPQKIDHAVIGG
VVAVVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTDEKKE
YYI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttgttggaaatgaagtgtatccttgaggatgggtgtaaaaacagcttcactttatct
ggaagattaaaacttcagggtcacggagctgctgaaaccgtgacagttgaagatcagaac
ctggcgactgacaatgtgtcagtgattgagggggaaatggccaccatcagctgcagagtg
aagaacaacgatgactctgtcattcagctgctcaaccccaacagacagaccatctacttc
aaagatgttagacctctgaaggacagccggttccagctggtgaatttctctgacaacgaa
ctgcgggtgtctctgtccaatgtgtcactctccgatgagggacgctatgtgtgccagctc
tacacggatcctcctcaggaagcctacgcagacatcactgtcctggtcccaccaggaagc
ccaatcatcgagagccatgaggatgtggtcagcgaggggaacgagacggagctcacctgc
acagccatgggcagcaagccagctgcctccatcagatggatgaaaggggaggaagaactg
acaggtgagacaacagttgaggagacgtatgacaggatgtttactgtcaccagccgagta
agattttctgtcaccaaagaggatgatggagtaccagtggactgcatcattgaccaccca
gctgcaaaggacctcctggctcaaagacatttagaagtgatgtataaaccagaagtaaag
atcgtggtgacatatcctgaaggattaccaagagagggtgacaatctagatttgacatgt
attgcagaaggaaaaccacacccccatcagatcaactggctgagagtagacgaggatgtg
ccgcctcacgctgtggtcaccggcgctgatctctacattgagaacctcaacaagtcttac
aacggcacctatcgctgtgtggctaccaatgctgtgggagaagcctacgatgactacacc
ctctatgttcatgatgctcccactactatccccacacccaccaccaatccagtcaacacg
caagactccagagccggcgagggggcaccacagaaaattgaccatgctgtcattggagga
gtggttgccgtggtgatgtttgccatcctctgtgcactcattgtgcttggtcgatacttt
gccagacacaaaggcacttacttcacacatgaagccaaaggggcagacgacgcagctgat
gcagacacggccatcatcaatgcggagggaggacacaacaatacagacgagaagaaggag
tactatatctaa
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