Scomber japonicus (chub mackerel): 128359855
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Entry
128359855 CDS
T09718
Name
(RefSeq) C-X-C chemokine receptor type 5
KO
K04190
C-X-C chemokine receptor type 5
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128359855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128359855
04050 Cytokine receptors [BR:
sjo04050
]
128359855
04090 CD molecules [BR:
sjo04090
]
128359855
G protein-coupled receptors [BR:
sjo04030
]
Rhodopsin family
Chemokine
CXC Chemokine
128359855
Cytokine receptors [BR:
sjo04050
]
Chemokine receptors
CXC Chemokine
128359855
CD molecules [BR:
sjo04090
]
Proteins
128359855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
128359855
NCBI-ProteinID:
XP_053176153
LinkDB
All DBs
Position
6:complement(19056920..19058014)
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AA seq
364 aa
AA seq
DB search
PNCDEVIKTIFLLYILKPYDEENYTDYEQDNVCDDEDLDLNTVFQPVLYSLIFLLGMVGN
GLMIAVLLRHWRRLRITEIYLLHLALADLMLLCTFPVVIVEYAAGWVFREFLCKLTGLMK
TLNFLCGSFLLACIGFDRYLAIVHAIPSMQNRRPRTVHQICISLWLVCLGLSVPNVVFLT
VTQERANTSRLSCFNTEYGIHANNWDLTDRVLNHVCFFVPLAVMSYCYTAIVVTLCKSQK
CQAKKGAIRLALLITLVFCFCWLPYNITLLIKTLDELKIISYKTCVSFYLMHQILGVTKS
LGFSHCCLNPFLYAFVGVRFRSELIQLLCQLGCHRVCLPFIRTKGHSRPSASDVATTASS
SVFI
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
cctaactgtgatgaggtaattaaaactatttttctcctttatattttaaagccatacgat
gaagagaattacactgactacgaacaagacaacgtctgtgatgatgaggacctggacctg
aatactgtgttccagcctgtgctttacagtttgatatttctgctgggcatggtgggaaac
ggcttgatgatagcggtgctgctgagacattggcgccgtcttcgcatcactgagatctac
ctgctgcaccttgcccttgctgacctgatgcttctttgtacatttcctgttgttatagtc
gaatatgcagccggatgggtgtttcgggagtttctctgcaagctgacgggcctgatgaaa
actcttaacttcctctgtgggagtttccttctggcttgcattgggtttgatcggtatttg
gcaattgttcatgctattcctagtatgcaaaatcgtcgcccgagaacagtgcaccaaata
tgtatttcactatggctggtctgtttggggttgtcagtacccaatgttgtgttccttact
gtgacacaggaacgtgcaaacacatctaggctctcctgtttcaacactgagtacggtatc
catgcaaacaactgggatttgaccgacagagtcttaaatcatgtgtgctttttcgtacct
ctggctgtcatgagctactgctacacagcaatagtagttactttgtgcaaaagtcagaaa
tgccaagcaaagaaaggtgccattcgactcgctttacttatcactctcgtcttttgtttc
tgttggcttccatataacatcaccttactgataaaaacattagacgaattgaaaatcatc
tcatataaaacctgtgtgtctttttacttaatgcaccaaatccttggggtgacaaagagc
ctgggcttctcacactgttgtctgaatcctttcttgtacgcctttgttggggtgcggttc
cgcagtgagctaatacaactgctttgccaattgggctgccatcgtgtttgtctgcctttc
atcagaactaagggtcacagtcgaccttccgcttctgatgtagcaacaactgccagcagc
agcgtcttcatctaa
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