Scomber japonicus (chub mackerel): 128359863
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Entry
128359863 CDS
T09718
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03440
Homologous recombination
sjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128359863 (brca2)
03460 Fanconi anemia pathway
128359863 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128359863 (brca2)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128359863 (brca2)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128359863 (brca2)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128359863 (brca2)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128359863 (brca2)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
128359863 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
128359863 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
128359863
NCBI-ProteinID:
XP_053176160
LinkDB
All DBs
Position
6:complement(21627603..21642154)
Genome browser
AA seq
2784 aa
AA seq
DB search
MDLPPESMYDTFKDDTWRELGPLDHDWFDVLTAQAVKTEKNFSDQDDLCAYKDGNFKTPF
DETAVESQLFSTPKVFRHRRVVSPEAKDEQSFTSEPEKETLPWTRSPYIIQISKEGVPGS
KYEGVQPQAEESFDLLQTPQKSPVSYAKYISESLGAQIHPDISWTSSLNTPPAVPSTLIL
SKTDESPCPVNLFEDQSVVFVRKLFPSLSNASRVGTVSPKHSDLIPPMIQEGADSPEADQ
NPEPHNSPSQSSHIQSDVCKQKLPDAIEDGEICTTVANVFDGAENVLSGFFSNSSSALRK
VKTDRIKRKQIISAKEPGCSSTQILTMNTAVSSGQRTADQQPSRAPLSPHLKSPVKTGDM
GTTQWSPLSLSEIPNSTVGHNNSPAAQVENNCLKKQLQSDSDCSQLVRPSLKISDSGFIK
KKRQFVYTVKSSKPQVQEKEIHSQKIDSSPAQGLNVKHLPNAQDKGDCGNIHNKTFEGKN
EMQQLENVTEENLPPSRKRLKLNSGPLLFSLQIKETGNETVRDINCQLTASQKADVTELC
TLLEEADSQFEFTQFKIATPNQQSDKELDPDFLSGIDFDDSFSSDAEKPVPTTMIPGKIA
LVSDEINPDTSKSAEMPFSGGMKKETVSSGNVPSSSKNIAEGSSFIMSSENLDRAEHDDK
SLPNNKNPLTLGMGFKTAGGNVLRVSKKCLSKARALFADLEENLVSDKNPPDKQTCEKYS
KAEHKDSVDNNLVPHEKDHSKLTCRSGFQMANGKGISISAKAMQKANALFKDCDNVDSSG
GTSVKHKNSIETLPGSFSHKKNLSKCESLTGIKVNLSEEPVKRHTELENVNSEPSVHLTE
VLQHDMEIDKSSFHGNQSLTAKSSSPLCTTSNSIGSSATDDLSVGGFCTASGKKVSVSVN
AMTKAKCLLNEIQTHKDTDQQMKQKTNSSRTSRFTNQPSGFKTASGKGVVISSAAKSLIG
EYDGVEDEVSGNQKYSKTPVHDSPPRGSGFLAASGKPVAFSSEALQRANALFDDISSSSE
IPAVSVRKNDKKQENGQDKEKLHRGFSTAGGTIICVSQQNLLKAKNLLKEFDDDDSMSVK
AMQETDASFKDCDVKDSNDTMSVKQKSKESVNKKNILPTFKNVPGVTVNVSEEPVSGYTE
FEHVKAGPDVHHEKMLHYDNVEIHKGVFKNTLALSDAPFLHANSYSMAKPLSLSSCTIAK
KLVSSAVDELNNDGGYCTASVKKVSVSDDAIVKAKSLLNESATFEDTNRQLKQKEGTPQN
VGFQTASGKGVAISSAALTRAKSLLSECDDDADKTNARPPHFKMPFPGPLPKNSGFLAAS
GKPVEFSSEALQRAKSLFDDISPSSEIPVVSEKRKNDNKQENAQNKEKLHSGFSTAGGAI
VRVSEQNLLKAKNLLKEFDDDSITVKAMQETDAFFKDCDVEDSLNTDIPAVSDTLKSEKK
SEDAQNNKEKTHCGFTTAGGTKVQVSQKNLLKAKNLLREIDTDSVQVKDGLECPDLNSYS
TAPVDTHNPGLSKDVKRPSNYNLSTTCNKNILAESDPQIVKSHRSFRETDSENKILQNSS
VHGCNFIKEKTVTDTCKFKEDKCVISGVLNPCGETRPDIMGYEIKQTSSSKKLEFKRTEE
SSVLNFQSLNLSGCTEAQQKFLAQEALDCTKALLEDEGLAGQSLSMTFENMPQQDNPKSS
KECVEEQKTTGKRLAEDTNMTGQPPLKRRLLDEFDRTVSSPRGSTLQPEKSCPTAVMKDR
RVFKYSVSLHPNITRPNRDGKNYMVTRLQQATPHSSPGDRKSTHSTIPAFVPPFLKNSKT
DTHKNNMVKDNIRTPVFVPPFKKQRTIVQESSKLQEEEDKHHCVSVMPSNSNTFVPPTKK
TSGQSTTDVTGNKSTEVTHTVALADNTKDDLVENRKSPVGYRTEDSATEASEVADTLSRS
QEIQTLQNIELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVSKIPLKDAVNGKPPAKY
TQKQLYGYGVHQHVSEITSENAQSFRFSIQQFLKREAFIDDGGVQLADGGWLIPSKDGTA
GKEEFYRALCDTPGVDPKLISEEWVYNHYRWIVWKQASMERSFPGTMGSLCLTPEQVLLQ
LKYRYDVEVDHSRRPALRKIMEKDDTAAKTLVLCVCGVVSRGHYPTRQSHNDAKTPHSAD
AKAENPCAVVWLTDGWYTIKAQLDDPLTAMLHKGRLAVGGKLIIHGAQLMGSQDACSPLE
APESLMLKICANSSRPARWDTKLGFFRDPRPFLLPLSCLYSNGGPVGCVDIVILRSYPIQ
WMERKPDGGVVFRSVRAEEKEARRYNSQKQKAMEIVFAKIQAEFEKEEKGNNKPQRRRRT
ISRQDIASLQDGEALYEAVQDDPAYLEAHLSEQQLETLHTYRRSLIEKKQAELQDRYRRA
LENAEENEGTCPKRDVTPVWRLCIADSMSQSSSVYQLNMWRPSSDLQSSLKEGCRYKVYN
LTTSDGKKRGGIETVQLTGNKKTQFQDIQGSKEWLSTHFQSRVSATFVDLQNPEFQPLCG
EVDLTGYVISITDGQGSSPAFYLVDGKLNFVKVRCFSSLAQSGVEDVVKPRALLALSNLQ
LRGQSTSPIPVVYAGDLIAFSANPKETHLQESLCQIRNLVQGQKNFFLTAEEKLSHLISS
VGMSSISSPALQPRTPAVLQQTTTDRIQDTKTSPIRSLGSFTPVGRNPPLGNGLTEKDPK
SLKRRRALDYLSRIPSPPPVSNLGSVASPSVNKTFNPPRRSGTPSTLKTVQTPAPKPVVL
TVEDEWVNDEELAMIDTQALHVGI
NT seq
8355 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccaccagaaagcatgtacgacacattcaaagacgacacctggagagagctg
ggaccactggaccatgactggtttgatgtactgacagctcaggcagtcaaaactgagaaa
aatttctctgatcaagatgacttgtgtgcatacaaagatggaaactttaaaacacccttt
gatgaaactgctgtggagagtcagttgttttcaacccctaaagttttcagacacagacga
gttgtgtcacctgaagccaaggatgagcagtctttcacttctgaaccagaaaaagaaaca
ctgccatggacaagaagtccatatattattcagatttcaaaagagggggtgccaggttca
aaatatgaaggtgtccagcctcaggctgaggaaagttttgatctgcttcagacaccacag
aaatccccagtcagctacgcaaagtatatatctgaaagtcttggtgcacaaattcatccc
gatatatcatggaccagttctctgaataccccaccagcagtgccttccacactgatttta
tctaaaactgacgagagtccctgcccagttaatctttttgaggaccaaagtgttgttttt
gtacggaagcttttcccctcactttcaaatgcatccagagttggaactgtgtcaccaaaa
cacagtgaccttattcctcccatgattcaagaaggtgctgattctcctgaggctgatcag
aatccagagcctcacaactctccttctcagagttcacatatccagagtgatgtctgtaaa
cagaagctaccagatgctattgaggatggagaaatttgcaccactgtagcaaatgttttt
gatggggctgaaaatgttctttcaggatttttctccaacagcagttcagcacttagaaaa
gtgaaaactgacagaataaaaaggaagcaaatcatttcagcaaaagaacctggctgcagc
tccacacagatcttgacaatgaacacggctgtgtccagtggccaaagaacagctgatcag
cagccaagcagagctcctttatccccacacttgaaaagtccagtgaaaactggagacatg
ggaaccactcagtggtctccattgagtttatctgaaataccaaactctactgtgggccat
aataacagtcctgctgcacaagtggaaaacaactgtttaaaaaaacagctacagagtgac
tctgattgtagccagcttgtcagaccatccttgaaaatctcagattctggatttatcaag
aaaaagagacaatttgtttacactgtgaaatcttcgaaaccccaagtgcaagaaaaggaa
attcattctcagaagattgactcatcaccagcgcaaggattgaacgttaagcatctgcca
aatgcccaagataaaggggactgtggcaacatccacaataaaacctttgaagggaagaat
gagatgcaacaactggaaaatgtcactgaagaaaacctgcctccctctagaaagaggctc
aaactcaacagtggaccactccttttcagcctacaaataaaggaaacgggaaatgaaaca
gtcagggacatcaattgccaattaacagcttcacaaaaagctgacgtgacagaactgtgc
actctattggaagaagcagatagccagtttgaattcacacagtttaaaattgcaacgcca
aaccaacaatctgacaaagaacttgacccagattttctttccggtatagattttgatgat
agttttagttcagatgctgaaaagcctgtgccaacaacaatgatacctggaaaaattgcc
ttagtttcagatgaaataaatcctgacacaagtaagtcagcagaaatgccattctctggt
ggaatgaagaaagaaaccgtctcttctggaaatgtaccttcctcttctaagaacattgct
gaaggtagtagttttattatgtcaagtgaaaatcttgacagagctgaacacgatgacaaa
agcttgccaaacaacaaaaatcctttgacacttggcatgggatttaaaactgctggagga
aatgttttgagggtttcaaaaaagtgtctgagcaaagctagagctttgtttgctgattta
gaggagaatcttgtttcagataaaaacccaccagacaagcaaacttgtgaaaaatatagc
aaagcagagcacaaggacagtgtggataataacttggtacctcatgaaaaggatcattca
aagctcacatgtcgaagcgggttccagatggccaatgggaaagggatttctatttcagca
aaagcaatgcaaaaggcaaatgctctcttcaaagactgtgataatgtggatagtagtggt
ggcacttcggtaaaacataagaatagtatagaaaccttgcctggaagtttcagtcataag
aaaaacctttcaaaatgtgaaagtcttactgggatcaaagtaaacctttctgaagaacct
gtcaaaagacacacggagttagaaaatgtaaattctgaaccatctgtacaccttactgag
gttctccagcatgatatggagattgacaagtcttcttttcatggaaaccagtctttaaca
gcaaagtcgtcttctcccttgtgcacaacatcaaatagtattggctcctctgccaccgat
gatttgagcgttggtggtttctgtacagccagcggcaagaaagtgtctgtatcagttaat
gcaatgacaaaagcaaagtgtcttctgaatgaaattcagacacacaaggacacagaccag
caaatgaaacaaaaaacaaactcttcaagaaccagtcgttttaccaatcagccaagtggc
tttaagacagctagtggaaaaggagttgttatttcatctgcagcaaaatctttgattggt
gaatatgatggagttgaggatgaagtcagtggaaaccaaaaatattccaagactccagtc
catgattcaccacccagaggtagtggatttcttgcagccagtggtaagccagtagcattt
tcatctgaggccctccagagggcaaacgctctctttgatgacatcagttccagttcagag
atcccagctgtttcagttaggaagaatgataagaaacaagaaaatggccaagacaaagaa
aaactgcatcgtggtttctcaacagcaggaggaacaataatctgtgtgtcacagcaaaat
ctgttgaaagcaaaaaatcttttgaaagaatttgatgatgatgattctatgtcagttaaa
gcaatgcaagagactgatgcttccttcaaagactgtgatgttaaggacagtaatgacacc
atgtcagtaaaacagaaaagtaaggaaagtgtcaacaagaagaatatcctcccaacattt
aaaaatgttccaggggtaacagtaaatgtttctgaggagcctgtcagtggatacacagag
tttgaacatgtgaaagctggaccagatgtacaccatgaaaagatgctgcattacgataat
gtggagattcacaaaggtgtttttaagaacacactggctttgagtgatgcacctttttta
catgcaaactcatactcgatggcaaagccactttccttgtcatcgtgcacaatagcaaag
aagcttgtttcctctgctgttgatgaattgaacaatgacggtggatactgtacagccagt
gtaaagaaagtgtcagtgtcagatgatgcaatagtaaaagcaaagtctctgctgaatgaa
agtgctacattcgaggacacaaacagacaactgaaacaaaaagaaggaacaccacaaaat
gttggatttcagacagccagtggcaaaggagtcgccatttcatctgcagctctaacaagg
gcaaaatccctgttgagtgaatgtgatgacgatgcggataaaaccaatgcaagaccacct
catttcaagatgccgtttcctggtccactacccaaaaatagtggatttcttgcagccagt
ggtaagccagtagaattttcatctgaggccctccagagggcaaaatctctctttgatgac
atcagtcccagttcagagatcccagttgtttcagaaaaaaggaagaacgataacaagcaa
gaaaatgctcaaaataaagaaaaactacattctggtttctcaacagcagggggagcaata
gtccgtgtgtcagagcaaaatctgttgaaagcaaaaaatcttttgaaagaatttgatgat
gattctatcacagttaaagcaatgcaggagaccgatgccttcttcaaagactgtgatgtt
gaggacagtttgaacacagacatcccagctgtttcagacacattgaaaagtgagaagaaa
tcagaagatgctcaaaataataaggaaaaaacacattgtggcttcacaactgcaggggga
acaaaagtccaagtgtcacagaaaaatcttttgaaagcaaagaaccttttgagagaaatt
gatactgattctgttcaagtaaaagatggtttggagtgtcctgatttaaactcatactca
acagccccagttgacactcacaatccaggtctatcaaaagatgtgaaaagaccctcaaat
tacaatctctcaacaacatgtaacaagaacattcttgctgaaagtgacccccagattgtt
aaatctcaccgttctttccgagagactgacagtgaaaataaaatccttcaaaattcaagt
gtacatggttgtaactttatcaaagagaagacagttacagatacatgtaaatttaaagag
gacaaatgtgttatctcgggggtgctgaatccctgcggagagactaggccagacataatg
ggctacgaaataaagcagacaagcagcagtaagaagctggagttcaaaaggacagaagag
tcttcagttctaaactttcagtcactcaacctcagtggctgcacagaagcccagcagaag
tttcttgcccaggaagccctggactgcactaaagctttgttagaagacgaaggtctagct
ggccaaagtctctctatgacttttgaaaatatgccacagcaagataacccaaaatccagc
aaggaatgtgtagaggagcagaaaacaacagggaagagattggcagaggatactaatatg
accggtcagcctcccctgaaaagacgattactggatgaatttgacagaactgttagtagt
ccaagaggatcaacacttcagccagaaaaaagctgtccaactgctgtaatgaaagacagg
agagttttcaagtacagcgtctctcttcatccaaacatcacaaggccaaacagggatgga
aaaaactacatggtaaccagactgcagcaggcaacaccacactcatccccaggtgacaga
aaatccactcattctacgataccagcatttgttcctccattcttgaagaattcaaagacg
gacactcacaagaataacatggtcaaggacaacataagaacacctgtgtttgttcctcca
ttcaaaaaacaaagaactattgtccaagagagctctaaactacaagaggaggaggataaa
caccactgtgtctctgtaatgccttcaaacagcaacacttttgtaccacccactaaaaag
acaagcggacaaagcactacagatgtaactggtaataaaagcacagaagttactcatacg
gtggccttggctgataacacaaaggatgatcttgtggaaaaccgtaaaagtcctgttggc
tatagaacagaggattctgctacagaggcttcagaagtggcggacacattatccagaagt
caagaaattcagactcttcagaacatagagctggcacgagatatgcaagacatgaggatc
aggaaaaagaagcgccagactatcagacctctgccagggagcttatttctaaccaaaact
tcaggagtgtcaaagatcccactaaaagatgcagtgaatggaaagccccctgcaaaatac
acccaaaaacagctgtacggatacggagtgcatcagcatgtgtctgagatcaccagtgag
aatgcacagtcgtttcgcttcagtatacagcagttcctcaaacgggaagcattcattgat
gacggtggtgttcagcttgctgatggcggatggctgatcccaagcaaggacgggactgca
gggaaagaagagttctatagagctttatgtgacaccccaggtgtggatcctaaactgatc
agtgaggagtgggtgtataatcactacagatggattgtgtggaagcaggcctccatggaa
agatcctttccaggaacaatgggcagcctctgtctcaccccagagcaagttctcctacaa
ctcaaatacagatatgatgttgaggtggaccacagtcgcaggccagctctgagaaagatc
atggaaaaggatgacacagcagccaaaaccctggttctctgtgtttgcggggtcgtctct
aggggtcactacccaaccagacaaagtcacaatgatgccaagactccacacagtgctgat
gcaaaggctgaaaacccatgtgcagtcgtttggctgacagatggatggtacaccattaaa
gcccagctggatgatcccttgactgccatgcttcacaaaggtcgactggctgttggtgga
aagctgatcatccatggggctcagctgatgggatcccaagatgcttgctcccctctagag
gcacctgaatctctcatgttaaagatttgtgccaatagcagcagaccagcacgatgggat
actaagcttggatttttcagggatccaaggccattcctgctgcctctctcctgtttgtac
agcaatggagggcctgttggatgtgtggacattgtcatactgagaagctaccccatacaa
tggatggagaggaaaccagatggtggcgttgtgttccgttctgtccgtgcagaagaaaag
gaggcgagacgctacaacagccagaagcaaaaggctatggagattgtgtttgcaaagatt
caagcagaatttgagaaggaagaaaaaggtaataacaaacctcaacgcagaagacggaca
atcagtcgtcaggatattgcaagtctgcaagatggagaagcgctgtatgaagcagttcag
gatgatccagcttaccttgaggctcatttgagtgaacaacagttggagactctacatacc
tacaggcgctctctgattgagaagaagcaggctgaactgcaggaccggtaccgtcgtgct
ctagaaaatgcagaggaaaatgaggggacctgtcccaaacgtgacgttactcctgtttgg
agactctgcattgctgactcaatgagtcaaagcagcagtgtttaccagttgaacatgtgg
cgaccgtcctcagaccttcagtcttcgttaaaggaaggctgtcgatacaaagtctataac
ctcaccacttcagatggaaaaaagcgcggtggtattgaaactgttcagctcaccgggaac
aagaaaacacagtttcaggacatacagggttcaaaggaatggttatcaacacactttcaa
tcaagggtgtctgcaacttttgtggatctccaaaacccagaattccagccgctctgtgga
gaggttgacctcacaggatatgtcatcagtatcactgatggtcaaggttcctctcctgca
ttttatctggtcgatgggaaactgaacttcgttaaagtgcgttgttttagcagcttggct
cagtctggtgtggaagatgtagtgaaaccacgtgcactgttagctctcagcaaccttcag
ctgagaggtcagtctacatctcccattcctgttgtgtatgctggagatctcatcgccttc
tcagcaaaccccaaggaaacacatctacaggaatccctctgtcaaatcagaaacctggtc
cagggtcagaagaacttctttcttactgctgaggagaagctttcacatttaatcagctct
gttggcatgagctccatctcctctccagctctgcaaccaaggaccccagcagtactgcag
cagactacaacagacagaatacaagacacaaagacaagtccaatccgaagccttggatcc
ttcacgcctgtgggcaggaaccctccactgggaaacggtttaacagagaaagacccgaaa
agcctgaagaggaggagagctctggactatctgtctcgtatcccatcaccaccacctgtg
tcaaatctaggctcagtggcttcaccgtctgtaaataagacattcaatccccctcggagg
tctgggacacctagcactttaaaaactgtacagactccagctcccaaacctgttgttttg
acggtggaggatgaatgggtgaacgatgaggagctggctatgattgatactcaggcatta
catgttggtatatag
DBGET
integrated database retrieval system