KEGG   Scomber japonicus (chub mackerel): 128359863
Entry
128359863         CDS       T09718                                 
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
  KO
K08775  breast cancer 2 susceptibility protein
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03440  Homologous recombination
sjo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    128359863 (brca2)
   03460 Fanconi anemia pathway
    128359863 (brca2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sjo04121]
    128359863 (brca2)
   03036 Chromosome and associated proteins [BR:sjo03036]
    128359863 (brca2)
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128359863 (brca2)
Ubiquitin system [BR:sjo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    128359863 (brca2)
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     128359863 (brca2)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     128359863 (brca2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     128359863 (brca2)
SSDB
Motif
Pfam: BRCA-2_helical BRCA2 BRCA-2_OB3 BRCA-2_OB1 BRCA2DBD_OB2 BRCA2_TR2 Tower
Other DBs
NCBI-GeneID: 128359863
NCBI-ProteinID: XP_053176160
LinkDB
Position
6:complement(21627603..21642154)
AA seq 2784 aa
MDLPPESMYDTFKDDTWRELGPLDHDWFDVLTAQAVKTEKNFSDQDDLCAYKDGNFKTPF
DETAVESQLFSTPKVFRHRRVVSPEAKDEQSFTSEPEKETLPWTRSPYIIQISKEGVPGS
KYEGVQPQAEESFDLLQTPQKSPVSYAKYISESLGAQIHPDISWTSSLNTPPAVPSTLIL
SKTDESPCPVNLFEDQSVVFVRKLFPSLSNASRVGTVSPKHSDLIPPMIQEGADSPEADQ
NPEPHNSPSQSSHIQSDVCKQKLPDAIEDGEICTTVANVFDGAENVLSGFFSNSSSALRK
VKTDRIKRKQIISAKEPGCSSTQILTMNTAVSSGQRTADQQPSRAPLSPHLKSPVKTGDM
GTTQWSPLSLSEIPNSTVGHNNSPAAQVENNCLKKQLQSDSDCSQLVRPSLKISDSGFIK
KKRQFVYTVKSSKPQVQEKEIHSQKIDSSPAQGLNVKHLPNAQDKGDCGNIHNKTFEGKN
EMQQLENVTEENLPPSRKRLKLNSGPLLFSLQIKETGNETVRDINCQLTASQKADVTELC
TLLEEADSQFEFTQFKIATPNQQSDKELDPDFLSGIDFDDSFSSDAEKPVPTTMIPGKIA
LVSDEINPDTSKSAEMPFSGGMKKETVSSGNVPSSSKNIAEGSSFIMSSENLDRAEHDDK
SLPNNKNPLTLGMGFKTAGGNVLRVSKKCLSKARALFADLEENLVSDKNPPDKQTCEKYS
KAEHKDSVDNNLVPHEKDHSKLTCRSGFQMANGKGISISAKAMQKANALFKDCDNVDSSG
GTSVKHKNSIETLPGSFSHKKNLSKCESLTGIKVNLSEEPVKRHTELENVNSEPSVHLTE
VLQHDMEIDKSSFHGNQSLTAKSSSPLCTTSNSIGSSATDDLSVGGFCTASGKKVSVSVN
AMTKAKCLLNEIQTHKDTDQQMKQKTNSSRTSRFTNQPSGFKTASGKGVVISSAAKSLIG
EYDGVEDEVSGNQKYSKTPVHDSPPRGSGFLAASGKPVAFSSEALQRANALFDDISSSSE
IPAVSVRKNDKKQENGQDKEKLHRGFSTAGGTIICVSQQNLLKAKNLLKEFDDDDSMSVK
AMQETDASFKDCDVKDSNDTMSVKQKSKESVNKKNILPTFKNVPGVTVNVSEEPVSGYTE
FEHVKAGPDVHHEKMLHYDNVEIHKGVFKNTLALSDAPFLHANSYSMAKPLSLSSCTIAK
KLVSSAVDELNNDGGYCTASVKKVSVSDDAIVKAKSLLNESATFEDTNRQLKQKEGTPQN
VGFQTASGKGVAISSAALTRAKSLLSECDDDADKTNARPPHFKMPFPGPLPKNSGFLAAS
GKPVEFSSEALQRAKSLFDDISPSSEIPVVSEKRKNDNKQENAQNKEKLHSGFSTAGGAI
VRVSEQNLLKAKNLLKEFDDDSITVKAMQETDAFFKDCDVEDSLNTDIPAVSDTLKSEKK
SEDAQNNKEKTHCGFTTAGGTKVQVSQKNLLKAKNLLREIDTDSVQVKDGLECPDLNSYS
TAPVDTHNPGLSKDVKRPSNYNLSTTCNKNILAESDPQIVKSHRSFRETDSENKILQNSS
VHGCNFIKEKTVTDTCKFKEDKCVISGVLNPCGETRPDIMGYEIKQTSSSKKLEFKRTEE
SSVLNFQSLNLSGCTEAQQKFLAQEALDCTKALLEDEGLAGQSLSMTFENMPQQDNPKSS
KECVEEQKTTGKRLAEDTNMTGQPPLKRRLLDEFDRTVSSPRGSTLQPEKSCPTAVMKDR
RVFKYSVSLHPNITRPNRDGKNYMVTRLQQATPHSSPGDRKSTHSTIPAFVPPFLKNSKT
DTHKNNMVKDNIRTPVFVPPFKKQRTIVQESSKLQEEEDKHHCVSVMPSNSNTFVPPTKK
TSGQSTTDVTGNKSTEVTHTVALADNTKDDLVENRKSPVGYRTEDSATEASEVADTLSRS
QEIQTLQNIELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVSKIPLKDAVNGKPPAKY
TQKQLYGYGVHQHVSEITSENAQSFRFSIQQFLKREAFIDDGGVQLADGGWLIPSKDGTA
GKEEFYRALCDTPGVDPKLISEEWVYNHYRWIVWKQASMERSFPGTMGSLCLTPEQVLLQ
LKYRYDVEVDHSRRPALRKIMEKDDTAAKTLVLCVCGVVSRGHYPTRQSHNDAKTPHSAD
AKAENPCAVVWLTDGWYTIKAQLDDPLTAMLHKGRLAVGGKLIIHGAQLMGSQDACSPLE
APESLMLKICANSSRPARWDTKLGFFRDPRPFLLPLSCLYSNGGPVGCVDIVILRSYPIQ
WMERKPDGGVVFRSVRAEEKEARRYNSQKQKAMEIVFAKIQAEFEKEEKGNNKPQRRRRT
ISRQDIASLQDGEALYEAVQDDPAYLEAHLSEQQLETLHTYRRSLIEKKQAELQDRYRRA
LENAEENEGTCPKRDVTPVWRLCIADSMSQSSSVYQLNMWRPSSDLQSSLKEGCRYKVYN
LTTSDGKKRGGIETVQLTGNKKTQFQDIQGSKEWLSTHFQSRVSATFVDLQNPEFQPLCG
EVDLTGYVISITDGQGSSPAFYLVDGKLNFVKVRCFSSLAQSGVEDVVKPRALLALSNLQ
LRGQSTSPIPVVYAGDLIAFSANPKETHLQESLCQIRNLVQGQKNFFLTAEEKLSHLISS
VGMSSISSPALQPRTPAVLQQTTTDRIQDTKTSPIRSLGSFTPVGRNPPLGNGLTEKDPK
SLKRRRALDYLSRIPSPPPVSNLGSVASPSVNKTFNPPRRSGTPSTLKTVQTPAPKPVVL
TVEDEWVNDEELAMIDTQALHVGI
NT seq 8355 nt   +upstreamnt  +downstreamnt
atggatttaccaccagaaagcatgtacgacacattcaaagacgacacctggagagagctg
ggaccactggaccatgactggtttgatgtactgacagctcaggcagtcaaaactgagaaa
aatttctctgatcaagatgacttgtgtgcatacaaagatggaaactttaaaacacccttt
gatgaaactgctgtggagagtcagttgttttcaacccctaaagttttcagacacagacga
gttgtgtcacctgaagccaaggatgagcagtctttcacttctgaaccagaaaaagaaaca
ctgccatggacaagaagtccatatattattcagatttcaaaagagggggtgccaggttca
aaatatgaaggtgtccagcctcaggctgaggaaagttttgatctgcttcagacaccacag
aaatccccagtcagctacgcaaagtatatatctgaaagtcttggtgcacaaattcatccc
gatatatcatggaccagttctctgaataccccaccagcagtgccttccacactgatttta
tctaaaactgacgagagtccctgcccagttaatctttttgaggaccaaagtgttgttttt
gtacggaagcttttcccctcactttcaaatgcatccagagttggaactgtgtcaccaaaa
cacagtgaccttattcctcccatgattcaagaaggtgctgattctcctgaggctgatcag
aatccagagcctcacaactctccttctcagagttcacatatccagagtgatgtctgtaaa
cagaagctaccagatgctattgaggatggagaaatttgcaccactgtagcaaatgttttt
gatggggctgaaaatgttctttcaggatttttctccaacagcagttcagcacttagaaaa
gtgaaaactgacagaataaaaaggaagcaaatcatttcagcaaaagaacctggctgcagc
tccacacagatcttgacaatgaacacggctgtgtccagtggccaaagaacagctgatcag
cagccaagcagagctcctttatccccacacttgaaaagtccagtgaaaactggagacatg
ggaaccactcagtggtctccattgagtttatctgaaataccaaactctactgtgggccat
aataacagtcctgctgcacaagtggaaaacaactgtttaaaaaaacagctacagagtgac
tctgattgtagccagcttgtcagaccatccttgaaaatctcagattctggatttatcaag
aaaaagagacaatttgtttacactgtgaaatcttcgaaaccccaagtgcaagaaaaggaa
attcattctcagaagattgactcatcaccagcgcaaggattgaacgttaagcatctgcca
aatgcccaagataaaggggactgtggcaacatccacaataaaacctttgaagggaagaat
gagatgcaacaactggaaaatgtcactgaagaaaacctgcctccctctagaaagaggctc
aaactcaacagtggaccactccttttcagcctacaaataaaggaaacgggaaatgaaaca
gtcagggacatcaattgccaattaacagcttcacaaaaagctgacgtgacagaactgtgc
actctattggaagaagcagatagccagtttgaattcacacagtttaaaattgcaacgcca
aaccaacaatctgacaaagaacttgacccagattttctttccggtatagattttgatgat
agttttagttcagatgctgaaaagcctgtgccaacaacaatgatacctggaaaaattgcc
ttagtttcagatgaaataaatcctgacacaagtaagtcagcagaaatgccattctctggt
ggaatgaagaaagaaaccgtctcttctggaaatgtaccttcctcttctaagaacattgct
gaaggtagtagttttattatgtcaagtgaaaatcttgacagagctgaacacgatgacaaa
agcttgccaaacaacaaaaatcctttgacacttggcatgggatttaaaactgctggagga
aatgttttgagggtttcaaaaaagtgtctgagcaaagctagagctttgtttgctgattta
gaggagaatcttgtttcagataaaaacccaccagacaagcaaacttgtgaaaaatatagc
aaagcagagcacaaggacagtgtggataataacttggtacctcatgaaaaggatcattca
aagctcacatgtcgaagcgggttccagatggccaatgggaaagggatttctatttcagca
aaagcaatgcaaaaggcaaatgctctcttcaaagactgtgataatgtggatagtagtggt
ggcacttcggtaaaacataagaatagtatagaaaccttgcctggaagtttcagtcataag
aaaaacctttcaaaatgtgaaagtcttactgggatcaaagtaaacctttctgaagaacct
gtcaaaagacacacggagttagaaaatgtaaattctgaaccatctgtacaccttactgag
gttctccagcatgatatggagattgacaagtcttcttttcatggaaaccagtctttaaca
gcaaagtcgtcttctcccttgtgcacaacatcaaatagtattggctcctctgccaccgat
gatttgagcgttggtggtttctgtacagccagcggcaagaaagtgtctgtatcagttaat
gcaatgacaaaagcaaagtgtcttctgaatgaaattcagacacacaaggacacagaccag
caaatgaaacaaaaaacaaactcttcaagaaccagtcgttttaccaatcagccaagtggc
tttaagacagctagtggaaaaggagttgttatttcatctgcagcaaaatctttgattggt
gaatatgatggagttgaggatgaagtcagtggaaaccaaaaatattccaagactccagtc
catgattcaccacccagaggtagtggatttcttgcagccagtggtaagccagtagcattt
tcatctgaggccctccagagggcaaacgctctctttgatgacatcagttccagttcagag
atcccagctgtttcagttaggaagaatgataagaaacaagaaaatggccaagacaaagaa
aaactgcatcgtggtttctcaacagcaggaggaacaataatctgtgtgtcacagcaaaat
ctgttgaaagcaaaaaatcttttgaaagaatttgatgatgatgattctatgtcagttaaa
gcaatgcaagagactgatgcttccttcaaagactgtgatgttaaggacagtaatgacacc
atgtcagtaaaacagaaaagtaaggaaagtgtcaacaagaagaatatcctcccaacattt
aaaaatgttccaggggtaacagtaaatgtttctgaggagcctgtcagtggatacacagag
tttgaacatgtgaaagctggaccagatgtacaccatgaaaagatgctgcattacgataat
gtggagattcacaaaggtgtttttaagaacacactggctttgagtgatgcacctttttta
catgcaaactcatactcgatggcaaagccactttccttgtcatcgtgcacaatagcaaag
aagcttgtttcctctgctgttgatgaattgaacaatgacggtggatactgtacagccagt
gtaaagaaagtgtcagtgtcagatgatgcaatagtaaaagcaaagtctctgctgaatgaa
agtgctacattcgaggacacaaacagacaactgaaacaaaaagaaggaacaccacaaaat
gttggatttcagacagccagtggcaaaggagtcgccatttcatctgcagctctaacaagg
gcaaaatccctgttgagtgaatgtgatgacgatgcggataaaaccaatgcaagaccacct
catttcaagatgccgtttcctggtccactacccaaaaatagtggatttcttgcagccagt
ggtaagccagtagaattttcatctgaggccctccagagggcaaaatctctctttgatgac
atcagtcccagttcagagatcccagttgtttcagaaaaaaggaagaacgataacaagcaa
gaaaatgctcaaaataaagaaaaactacattctggtttctcaacagcagggggagcaata
gtccgtgtgtcagagcaaaatctgttgaaagcaaaaaatcttttgaaagaatttgatgat
gattctatcacagttaaagcaatgcaggagaccgatgccttcttcaaagactgtgatgtt
gaggacagtttgaacacagacatcccagctgtttcagacacattgaaaagtgagaagaaa
tcagaagatgctcaaaataataaggaaaaaacacattgtggcttcacaactgcaggggga
acaaaagtccaagtgtcacagaaaaatcttttgaaagcaaagaaccttttgagagaaatt
gatactgattctgttcaagtaaaagatggtttggagtgtcctgatttaaactcatactca
acagccccagttgacactcacaatccaggtctatcaaaagatgtgaaaagaccctcaaat
tacaatctctcaacaacatgtaacaagaacattcttgctgaaagtgacccccagattgtt
aaatctcaccgttctttccgagagactgacagtgaaaataaaatccttcaaaattcaagt
gtacatggttgtaactttatcaaagagaagacagttacagatacatgtaaatttaaagag
gacaaatgtgttatctcgggggtgctgaatccctgcggagagactaggccagacataatg
ggctacgaaataaagcagacaagcagcagtaagaagctggagttcaaaaggacagaagag
tcttcagttctaaactttcagtcactcaacctcagtggctgcacagaagcccagcagaag
tttcttgcccaggaagccctggactgcactaaagctttgttagaagacgaaggtctagct
ggccaaagtctctctatgacttttgaaaatatgccacagcaagataacccaaaatccagc
aaggaatgtgtagaggagcagaaaacaacagggaagagattggcagaggatactaatatg
accggtcagcctcccctgaaaagacgattactggatgaatttgacagaactgttagtagt
ccaagaggatcaacacttcagccagaaaaaagctgtccaactgctgtaatgaaagacagg
agagttttcaagtacagcgtctctcttcatccaaacatcacaaggccaaacagggatgga
aaaaactacatggtaaccagactgcagcaggcaacaccacactcatccccaggtgacaga
aaatccactcattctacgataccagcatttgttcctccattcttgaagaattcaaagacg
gacactcacaagaataacatggtcaaggacaacataagaacacctgtgtttgttcctcca
ttcaaaaaacaaagaactattgtccaagagagctctaaactacaagaggaggaggataaa
caccactgtgtctctgtaatgccttcaaacagcaacacttttgtaccacccactaaaaag
acaagcggacaaagcactacagatgtaactggtaataaaagcacagaagttactcatacg
gtggccttggctgataacacaaaggatgatcttgtggaaaaccgtaaaagtcctgttggc
tatagaacagaggattctgctacagaggcttcagaagtggcggacacattatccagaagt
caagaaattcagactcttcagaacatagagctggcacgagatatgcaagacatgaggatc
aggaaaaagaagcgccagactatcagacctctgccagggagcttatttctaaccaaaact
tcaggagtgtcaaagatcccactaaaagatgcagtgaatggaaagccccctgcaaaatac
acccaaaaacagctgtacggatacggagtgcatcagcatgtgtctgagatcaccagtgag
aatgcacagtcgtttcgcttcagtatacagcagttcctcaaacgggaagcattcattgat
gacggtggtgttcagcttgctgatggcggatggctgatcccaagcaaggacgggactgca
gggaaagaagagttctatagagctttatgtgacaccccaggtgtggatcctaaactgatc
agtgaggagtgggtgtataatcactacagatggattgtgtggaagcaggcctccatggaa
agatcctttccaggaacaatgggcagcctctgtctcaccccagagcaagttctcctacaa
ctcaaatacagatatgatgttgaggtggaccacagtcgcaggccagctctgagaaagatc
atggaaaaggatgacacagcagccaaaaccctggttctctgtgtttgcggggtcgtctct
aggggtcactacccaaccagacaaagtcacaatgatgccaagactccacacagtgctgat
gcaaaggctgaaaacccatgtgcagtcgtttggctgacagatggatggtacaccattaaa
gcccagctggatgatcccttgactgccatgcttcacaaaggtcgactggctgttggtgga
aagctgatcatccatggggctcagctgatgggatcccaagatgcttgctcccctctagag
gcacctgaatctctcatgttaaagatttgtgccaatagcagcagaccagcacgatgggat
actaagcttggatttttcagggatccaaggccattcctgctgcctctctcctgtttgtac
agcaatggagggcctgttggatgtgtggacattgtcatactgagaagctaccccatacaa
tggatggagaggaaaccagatggtggcgttgtgttccgttctgtccgtgcagaagaaaag
gaggcgagacgctacaacagccagaagcaaaaggctatggagattgtgtttgcaaagatt
caagcagaatttgagaaggaagaaaaaggtaataacaaacctcaacgcagaagacggaca
atcagtcgtcaggatattgcaagtctgcaagatggagaagcgctgtatgaagcagttcag
gatgatccagcttaccttgaggctcatttgagtgaacaacagttggagactctacatacc
tacaggcgctctctgattgagaagaagcaggctgaactgcaggaccggtaccgtcgtgct
ctagaaaatgcagaggaaaatgaggggacctgtcccaaacgtgacgttactcctgtttgg
agactctgcattgctgactcaatgagtcaaagcagcagtgtttaccagttgaacatgtgg
cgaccgtcctcagaccttcagtcttcgttaaaggaaggctgtcgatacaaagtctataac
ctcaccacttcagatggaaaaaagcgcggtggtattgaaactgttcagctcaccgggaac
aagaaaacacagtttcaggacatacagggttcaaaggaatggttatcaacacactttcaa
tcaagggtgtctgcaacttttgtggatctccaaaacccagaattccagccgctctgtgga
gaggttgacctcacaggatatgtcatcagtatcactgatggtcaaggttcctctcctgca
ttttatctggtcgatgggaaactgaacttcgttaaagtgcgttgttttagcagcttggct
cagtctggtgtggaagatgtagtgaaaccacgtgcactgttagctctcagcaaccttcag
ctgagaggtcagtctacatctcccattcctgttgtgtatgctggagatctcatcgccttc
tcagcaaaccccaaggaaacacatctacaggaatccctctgtcaaatcagaaacctggtc
cagggtcagaagaacttctttcttactgctgaggagaagctttcacatttaatcagctct
gttggcatgagctccatctcctctccagctctgcaaccaaggaccccagcagtactgcag
cagactacaacagacagaatacaagacacaaagacaagtccaatccgaagccttggatcc
ttcacgcctgtgggcaggaaccctccactgggaaacggtttaacagagaaagacccgaaa
agcctgaagaggaggagagctctggactatctgtctcgtatcccatcaccaccacctgtg
tcaaatctaggctcagtggcttcaccgtctgtaaataagacattcaatccccctcggagg
tctgggacacctagcactttaaaaactgtacagactccagctcccaaacctgttgttttg
acggtggaggatgaatgggtgaacgatgaggagctggctatgattgatactcaggcatta
catgttggtatatag

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