Scomber japonicus (chub mackerel): 128359907
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Entry
128359907 CDS
T09718
Name
(RefSeq) extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128359907
G protein-coupled receptors [BR:
sjo04030
]
Others
Chemoreception
Vomeronasal pheromone
128359907
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Trm112p
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
128359907
NCBI-ProteinID:
XP_053176197
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Position
6:25066587..25070982
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AA seq
900 aa
AA seq
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MSLLSWLFTLWPSSALSLLLVGLMDRQLGLRVGLHVVQTLTCSQWATPSTHRLFQDGDVV
IGGLFNVRHQTPAIDHDFTQLPDYKPCAGLEHVPLQYIYAMVFAVEEINHLTTLLPGVKL
GYHIRNSCGLPLWALQSALSMVGGDSTRCNLTAPLDYSDGYGEENEESRDRQPVPLIIGG
ASSVTAQILSRILGPLSISYLASCPCLSDRRQFPNFFRTIPSDIYQARAIAQLAIRFNWT
WIGAVIANNNYGHAALKVFQEEIQGAGVCLAFVETLQRQNIVNDAKRSALTIQASIARVI
LIFAWYTDVRELFLQLAKINVTDRQFLASEGWSTSGDLLQNLATSKVANGVLGVAIRSST
IPGFGHFLRGLNPSRGPYNEFFREFWEQEFGCTPQKRSSHPSNNSTSAFAKSSLQKASLP
LCRGTESLERVQSLFTDISQLRVSYNVYLAVYAAAHALHSLLSCPDRDNPLRNNSTCSSP
KHIKPIELLQHLNNINFITPQGERFFFQGADTPAKYDLVNWQKTPEGSQKTVLIGHVDGF
NLHFSESVIQWSTGSNQVPVSVCSESCPSGTRKANRKGEPVCCFDCIPCAEGKINNKTGS
LHCEHCPLEFWSNTERTACIPRQLDFLSFNETLGITLTTAAVSGVIVTTAVFVVFLCYRQ
TPMVRANNSELSFLLLLSLKLCFLCSLVFIGRPSFWSCRFQQAAFGISFVLCVSCLQVKT
VVVLAAFRSARPGAEALIKWFGPGQQRGSVFLLTCIQVIICVIWLSLSPPVPQHDLGFQG
SKVTLECAMTSVVGFSVVLGYIGLLACTCLILAFLARKLPDNFNEAKLITFSMLIFCAVW
VAFVPAYVSSPGKYTVAVEIFAILASSYSLLFCIFAPKCFIILLRPEKNTKKHLMARHHR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgttgtcctggctcttcactctgtggccctcttcagccctgtccctgctcctt
gtggggcttatggacagacagttggggctcagggtgggattgcacgtggttcagacactg
acttgttctcagtgggctacaccaagtactcatcgtttgttccaggatggagatgtggtt
attggtggcctctttaatgttcgtcaccaaactccagctattgaccatgacttcactcag
ctaccagactacaaaccttgtgctggtttagaacatgttccattacagtatatatatgct
atggtgtttgcggtggaggaaatcaatcatcttacaaccctgctaccaggtgtgaaactg
ggctaccatatacgtaatagctgtggacttcccctgtgggctctccagtcagcactgtcg
atggttggaggagacagcaccagatgtaatttgacagctcctctggactattctgatggc
tatggagaagaaaacgaagaaagtagagatagacaacctgttcccttgatcattggtggt
gcctcatcagtaacagcccagatactctccagaatcctggggccactgtctatcagttac
ttggcaagctgcccctgcttgagtgacagacgccagtttcctaacttcttcaggaccatc
ccgagtgatatttaccaagcacgggccattgcccagcttgccattcgcttcaactggact
tggattggagcagtgatagcaaacaataattatggccatgcagcattaaaggtttttcag
gaggagattcagggggcaggggtgtgtctggcatttgtagagactctgcaaaggcaaaat
attgtgaatgatgccaaacgatcagcactcacaattcaggcctcaattgcaagggtgatt
ctaatctttgcctggtatacagatgtgagggaactgtttctgcaactggccaagataaat
gtgactgacagacagtttctggccagtgaaggttggagcaccagtggtgatcttctccag
aatcttgccacctctaaagtggcaaatggtgttcttggtgtggccattcgaagttcaact
ataccaggatttggacattttctcagaggtttgaacccatctcgtggtccttacaatgag
ttcttcagagaattctgggaacaggagtttggatgtacacctcaaaaaaggtctagccat
ccctcaaataattctacttcagcttttgccaaatcatctcttcagaaagcttcgttacca
ctctgcaggggaacagagtccctagagagggtgcagagtctttttactgacatctcccag
ctaagggtgtcatataatgtctaccttgctgtttatgctgcagcccatgctctccacagc
cttctctcatgccctgacagagacaaccctctcagaaacaactcaacttgctcatctcca
aaacacatcaaacccatagagctgttgcagcacttgaacaacattaacttcattacacca
cagggggaaaggttctttttccaaggggctgacactccagcaaagtatgaccttgtcaac
tggcagaaaactcctgagggctcacaaaaaacagttttgattggtcatgtggatgggttc
aatctgcactttagtgagtcagttattcaatggagcacaggatccaatcaggtgccagtt
tcagtgtgcagtgagagctgcccctcaggtacccgaaaggccaacaggaaaggggaacct
gtctgctgctttgattgtatcccatgtgctgaaggaaaaattaataacaaaactggttcc
cttcactgtgagcactgtccacttgagttctggtccaacactgaacgaactgcttgcatc
cctcgccagctggactttctttcctttaacgagaccttgggcattactctgactacagca
gctgtgtctggtgtcattgtgacaacagctgtctttgtggtgtttctttgttaccgacaa
acacctatggttcgagccaacaattcagaattgagcttcctgcttcttctgtcactgaaa
ctctgcttcctgtgttcactggtgttcattggtcgtccttcattctggtcttgtcggttc
cagcaagcagcatttgggatcagctttgtactttgtgtttcctgcctccaagtcaaaacc
gtagtggttctcgcagctttccgctcagctcggcctggtgctgaagccttgataaagtgg
tttggtccaggccaacagagaggaagtgttttcctacttacttgtatacaggttatcatc
tgtgtcatatggctgtccctcagtccccctgtaccccaacatgatctgggtttccaaggg
tcaaaggttaccctggagtgtgccatgacctctgtggtgggcttctctgtggttctgggt
tacattgggctgcttgcctgcacctgtctcatcttggcctttcttgcaaggaaactcccc
gataactttaatgaggccaaactgatcactttcagcatgctgatcttctgtgctgtctgg
gtggcatttgtccctgcttatgttagttctcctggaaaatacactgtcgctgtggagatt
tttgcaattctggcatctagttatagtttactgttctgtatttttgctccaaagtgtttt
atcattcttttaaggccagagaagaacactaagaaacacttgatggccaggcaccacaga
taa
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