Scomber japonicus (chub mackerel): 128359952
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Entry
128359952 CDS
T09718
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128359952
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128359952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
128359952
NCBI-ProteinID:
XP_053176238
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Position
6:complement(30672152..30685966)
Genome browser
AA seq
1019 aa
AA seq
DB search
MAQVYCWGDSSSGQFGPQSALSPVSWSVRSVITGVCCGERHTLFLTRDGEVLSCGHNSQG
QLGRQSDKDERTPGVVQGLGEVVMVACGQDHSLAVCASGCMYSWGQEENGQLGMSPNEMC
YSHRPSQVPLPLPVPVIQVACGNSHSLALTRGGDVFSWGLNSHGQLGLGKKVSLQYTPVL
VCALSGVPVTQISAGANHTLFLTLSGLVYCCGANKEGQLGLNRIDEKGRFGVCMVPALRP
LGVSFISCGEAHSAVLTKEGKVFTFGEGTHGQLGHNSSVNEVRPRLVDGLDGPASQVACG
RRHTLVLGSSGQLWAFGSGVKGQIGTGLSENSLTPTLVQLPWITDSAAAVPSGLKIAAGW
NTNFAYPSATQSLERHQLTGRLDETKLKKWLSMREGNTEAKREIASMFLTSSSLVASFTK
ADGLSSEAGALTVDLEAASQAFDQLLAIPWIKKSVNLTLLMDLLLASMDQLKSPEIILIL
LTCPLLQEDSNAMTGVLPLAILIDKMGENTQKLLRSFWSSLTPSILMKHILVFKNALGFM
LRNGLLATHNPGVKFLLEALKKLYKANKAGKSYKVPLSTFYVEEIGGNVPVEDVGLWIGF
SKMEDDDNTPAIFCRYPFLFNLVCKVSVFNIFADIMKKTELFEFIHDQAFVNPDKFLAKP
PPSAPPAVFQLTLRRAHLLEDTFRQLSSADHCAFRRELSVIYTDDRKVSNVNKKDFFLYL
FKKLSKSDMFMYNESKTVAWFPARPKVEVKRYFLFGVLCGLALYNHNIIHLGFPLVLFKK
LCSGKPSLDDLKEFDPVVGESMRCILEDYTPDKLAEMEAPFAVHWAGEEVELDPKEPGKL
VTDSNKKEFVASFVNYAFNKSVERVFEEFKRGFFKVCDMDVVDFFQPEELQAVMVGQENY
DWEVFKQNTVYEGEYHAAHSNILTFWEVFDKLTPDEKKKFLLFLTGSERVPFLGMESIKM
RVAALPESTEIHFPESLTCHCLLLLPIYKSYPVERTMHERLLHAIHHNRGFSKKRDVTG
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtgtactgctggggggacagctccagtggacagtttggaccacagtctgct
ctcagtcccgtgtcctggtcagtccgatctgtcatcacaggggtctgctgcggggagaga
cacactttattcctcaccagggatggagaagttttatcctgtgggcacaactcacaggga
caacttggacgacagagtgataaagatgaaaggacaccaggtgttgtgcagggactgggt
gaggtggtgatggtggcttgtggtcaggatcactctctggctgtatgtgcatcaggatgc
atgtactcctggggacaggaagaaaatggccaactagggatgtcaccgaatgaaatgtgc
tacagtcacagaccaagtcaggtgcctttgcctttgccagtaccagtgattcaggttgca
tgtggaaactcccactccttggctttgactagaggaggagacgtcttctcgtggggttta
aacagtcacggacagctgggtctggggaagaaggtgtcactgcagtacacacctgtcctg
gtgtgcgctctgagcggcgtaccagtaacgcagatatcagctggagcgaaccacacactg
ttcctcacactctcaggcctggtgtactgctgcggggccaataaagagggccaactgggg
ctcaacaggattgatgagaagggtagattcggcgtgtgcatggtacctgctctcagaccc
ctgggtgtctccttcataagttgtggagaggctcactctgccgtgttaacaaaggagggc
aaggttttcacttttggagagggaacccacggtcagcttggtcacaactcttctgttaat
gaagtgagacccagactagttgatggtttggatggacccgcctcacaggttgcatgtggc
aggcgtcacactctggttttaggctcctcaggccagctgtgggcttttggcagtggggtt
aaaggtcaaattggtactggactttcagagaacagtctgactcccactcttgtacaactt
ccatggatcaccgacagtgcagcagccgtaccctcaggcttgaaaatagctgctgggtgg
aatacgaatttcgcttacccctcagctactcagagcttggagcgacatcagctaactggg
cggcttgatgagacgaagctgaaaaaatggctgtcaatgagagaaggcaacacagaggca
aagagagaaatcgcctcaatgtttctcacaagttcaagtcttgttgcaagtttcacaaaa
gcagatgggctctcatcagaagcaggtgccttaactgtggaccttgaagctgcgagccaa
gctttcgaccagctcctggcaataccatggatcaaaaaatcagtgaaccttaccctcctc
atggacttgctccttgcttcgatggatcagctaaagtctccagagatcatcctgattctg
ctgacgtgcccccttcttcaagaggactctaacgccatgacgggggtgttgcctttggct
atcctcatagacaaaatgggcgagaacactcagaaactattaaggagcttttggtcttcc
ctgacaccctccatactgatgaagcacatcttagtgttcaaaaacgccctcggctttatg
ctgagaaatggcctcttggcgactcacaacccaggagtcaaattcctgctggaagccctc
aaaaaactctacaaagcaaacaaagctggaaagtcctacaaagtcccactgagcaccttt
tacgtagaggagatcggtggaaatgtgccagtggaggacgtaggtctttggatcgggttt
tctaaaatggaggacgacgacaacacacctgccatcttctgtcgctacccgttcctgttc
aatctggtttgcaaggtgtcggtctttaacatctttgctgacataatgaagaaaacggag
cttttcgagttcattcatgaccaggcttttgtgaatcctgacaaatttttggccaaacct
ccaccctctgctccacccgctgtcttccagctgactctgagacgagctcacctgctggaa
gacaccttcagacagctcagttcagcagatcattgcgccttcagaagggagctttcagtc
atatatacggatgacaggaaggtgtcgaatgtcaacaaaaaggatttcttcctctacctg
tttaagaagctgtccaagtcggacatgttcatgtacaacgagagcaagactgtggcctgg
ttccctgccaggccaaaagttgaggtgaagcgttatttcctgtttggagtcctgtgtggc
ctggctctctacaaccacaacatcatccacctgggcttcccgctggttctcttcaagaag
ctgtgcagcggcaaaccttcactggatgacctgaaggagtttgatcctgtagttggagag
agtatgcggtgcatattagaggactacactccggataagcttgccgagatggaggctcct
ttcgctgtgcattgggccggtgaagaagtcgagcttgatccaaaagaacctggaaaactg
gtcacagattcaaacaagaaagagtttgtagcgtcctttgtcaactatgccttcaacaaa
tcggtggagcgagtgtttgaagagttcaagagagggttcttcaaggtgtgcgacatggac
gtggtggatttcttccagccagaggagctgcaagcagtgatggtgggacaagaaaactac
gactgggaagtgttcaaacagaacacagtttacgaaggagagtaccacgctgcacactcc
aacatcctgaccttctgggaggtgttcgacaaactgacaccagacgaaaagaagaaattc
cttctgttcctcacaggttctgaacgtgtccctttcctcgggatggagagcatcaagatg
agagtcgccgcgttgcccgaatcgactgaaatccatttcccagaatccctcacctgccat
tgccttttattactgcccatctacaagagctacccagtggagagaacgatgcatgagagg
cttcttcacgctattcatcacaaccgaggcttctccaagaaacgagacgttacaggctga
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