Scomber japonicus (chub mackerel): 128359961
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Entry
128359961 CDS
T09718
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
sjo04510
Focal adhesion
sjo04518
Integrin signaling
sjo04540
Gap junction
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128359961 (pdgfd)
04020 Calcium signaling pathway
128359961 (pdgfd)
09133 Signaling molecules and interaction
04518 Integrin signaling
128359961 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128359961 (pdgfd)
04540 Gap junction
128359961 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128359961 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sjo04052
]
128359961 (pdgfd)
Cytokines and neuropeptides [BR:
sjo04052
]
Cytokines
Growth factors (RTK binding)
128359961 (pdgfd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
AcfD_helical
Motif
Other DBs
NCBI-GeneID:
128359961
NCBI-ProteinID:
XP_053176248
LinkDB
All DBs
Position
6:31535984..31602529
Genome browser
AA seq
348 aa
AA seq
DB search
MNGPLVLLMWMVLVLVISGVARAQVSTAKVLRGNIRRDDLYRKEENITVTPSGGVIHSPR
YPNAYPRNLLLSWKLLSPPGSQIHLEFDGHFGLEEAENGACRYDFVEVEDQSETSTIIWG
RWCGQKAPPSLNSKTNTLRVTFKSDDYFVAKPGFKIYYSLLDSGGSQVSVAATQVPFSLE
DLDRTIAAFDTIEQLLRSLNPETWRQDLDSIYTQTHIHYRSRAYHLASRHNKVDLNRLYE
DVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVKRCGGNCGCGTDNWNNGCSCQAAKTT
QKLHEVLKYAPEVTHSRHRRPRVRWVIDEIFLTHHETCECACPSQPPR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacctttagttctccttatgtggatggtcttagttttggttataagcggagtc
gcgagggctcaggtctctactgccaaagtcttgaggggcaacatcagaagagacgacttg
taccgcaaagaggaaaacatcacggtaacgccgtcgggtggagtcatccacagcccacgc
taccccaacgcttacccccgcaacctgctgttgtcatggaaactgctgtcaccgccagga
agccaaatacacctggagtttgacggacactttggcctggaggaggctgagaacggagcg
tgcaggtatgactttgttgaagtggaggaccaatcggagaccagcactataatttggggt
cgctggtgtgggcagaaagcaccgcctagtctcaactctaaaaccaacacactcagagtc
accttcaagtctgatgattactttgttgcaaagccgggattcaaaatctactactcgctg
ctggacagcggtggctcgcaggtgtccgtagccgccacacaggttcctttctccttggag
gatttagaccggaccatagctgcctttgacactatagaacaacttctcagatcgctgaac
ccagagacctggagacaagacttggacagcatctacactcaaactcacatacattataga
tccagggcctatcatctggcaagcaggcataataaagttgatctgaaccgtctctatgaa
gacgtcaagcgctacagttgtacccctcgcaactactccgtgaacctacgggaggagctg
agagccaccaacgctgtcttcttccctcgatgtctgctggtcaaacgctgcggaggcaac
tgtggctgcgggaccgataactggaacaacggctgctcctgtcaggctgccaaaacgaca
caaaaactacatgaggtgctgaagtacgccccagaggtcactcactcacgccacaggagg
ccacgggtgcgctgggtcatagatgagatcttcctcacacaccatgaaacgtgtgagtgt
gcgtgtccctctcagccgcctcgctga
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