Scomber japonicus (chub mackerel): 128359965
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Entry
128359965 CDS
T09718
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128359965 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128359965 (myo5aa)
04131 Membrane trafficking [BR:
sjo04131
]
128359965 (myo5aa)
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128359965 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128359965 (myo5aa)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128359965 (myo5aa)
mRNA cycle factors
P-body specific factors
128359965 (myo5aa)
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Myosins
128359965 (myo5aa)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128359965 (myo5aa)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128359965 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
HTH_17
AAA_16
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
128359965
NCBI-ProteinID:
XP_053176256
LinkDB
All DBs
Position
1:14603139..14633059
Genome browser
AA seq
1741 aa
AA seq
DB search
MGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEAN
IEDKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDSRFRIIGANMRTYLLEKSRVVF
QADEERNYHIFYQLCASSHLPEFKNLKLSNANDFLYTRQGRSPVIDGVDDTKELCSTRNA
FLMLGINESYQKGLFQVLAAILHLGNVEIKDRDSDSSIIPPNNRHLTAFCELVGVSYQDM
AQWLCHRKLKTATETYIKPVPRLQATNARDALSKHIYAKLFNWIVEHVNKALMTNIKQHS
FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYD
NQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLFEKPRMSNRAFIIQ
HFADKVEYQCEGFLEKNKDTVNEDQISVLKASKFDLLVELFQDEEKATSPTGQVPGTGGR
TRLSIKPDKSRDTSRKEHKKTVGCQFRNSLQMLMDTLNATTPHYVRCIKPNDFKLAFSFD
PKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLPDKKLTCRNVLEK
LVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRCWLARKKYLRKRNAA
ITIQRFTRGYQARCLAKFLRRTQAATIIQKYQKMYMERKRYRQKQAAALAMQTILRAYMA
RQKYQALLREHKAVIIQKHIRGWLARSWYKRCLVSLVYLQCCFRRMKARRELKKLKIEAR
SVEHFKKLNKGMENKIMQLQRKIDEHVKDNKVVSEKLAGLETSYTAESERMRGELNRLRG
VEEDAKNKGNKVNSLLEELEKLRKELRVTQQEKKTIEDWAQTYRDEMETMVSELKDQNGS
LKKDKEDLNRMIQEQSQQMTEKMARLIAEETQQLETDLNEERSRYQNLLSEHLRLEEKYD
DLKEEMSSNVSKPGHRRTDSTHSSNESEYTYNSEYAELEEGSRAGEDVTRGMDTPLTLKL
QKRLTELEQEKQSLRNELENKEEQFQRARARDDAEFKKARGAELEYESLKRQELESENKK
LKHNLAEMRQSLLGNAAAGAGAPGSPAYKVLLDQLNSSCEELDVRKEEVLILRSQLVSQK
EAMQHKDEKETMTDTPSFVEDVSKLKDADELKQAYISLKDTNRSAAPDFHKLNEDGELWL
VNQGLKETIRLLEHQLQTQRRTNDSEVEALRGELQNVKEENNRQQQLLAQNLQLPPEARI
EASLQHEITRLTNENLELLADDPTASREARVIILRRMVDLMEQLEKQDRTIRKLKKQLKV
YSKRIGEMGAGQTEGQTSPGQMVDEPIHPVNIPRREKDFQGMLEYKKEDELKLVKNLILE
LKPRGVAVNLIPGLPAYILFMCLRHADYLNDDQKVRTLLTSTINSIKKILKKRGDDFETV
SFWLSNTCRFLHCLKQYSGDPAFMKHNSSKQNEHTLSNFDLAEYRQVISDLAIQIYQQLI
KCMENILHPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTDTLDSILRQLSAFHST
MCQHGTDPELIKQVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKG
LMTCGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCLALTTAQIVKVLNLYTPVNEFEE
RVSIAFIRTIQTRLRDRCDTPQLLMDTKMIYPVTFPFNPSSLALETIQIPTSLNLAFLTR
V
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgggagacatggaccctcatatctttgctgtggcagaggaggcttacaaacagatggcc
agggacgagaggaaccagtcgatcattgtgagcggggagtctggagcaggaaagactgta
tcagccaaatacgccatgagatacttcgctacagtcagcggctccgccagcgaggccaac
attgaggataaggtcttggcttccaaccccatcatggaggccattggaaatgcaaagacc
acccgaaatgacaacagcagtcgttttgggaaatacatcgagatcggctttgacagccgc
tttcgtatcatcggtgccaatatgagaacatatctgctggaaaaatctcgagtggtgttt
caggcggatgaggagaggaactatcatatcttctatcagctctgtgcatcatctcatctg
ccggaattcaagaatctgaaactgagtaatgcaaatgacttcctgtacaccagacagggc
cgcagcccggttatcgatggcgtggatgacaccaaggagctctgcagcacccgaaatgcc
ttcttaatgctgggtattaacgagtcctatcagaagggattgttccaggttttggctgct
attcttcatctgggaaacgtggagataaaagacagagattcagacagcagtatcatccct
cccaacaaccgccacctgacggcgttttgcgagctggtcggtgtgagctaccaggacatg
gcgcagtggctctgccataggaagctgaagaccgccacggagacatatatcaagcccgtc
ccccgtctgcaggccacaaatgcccgtgacgcgctgtccaaacatatctacgccaagctc
ttcaattggattgtggagcacgtcaacaaggctctgatgaccaatatcaaacagcactcc
ttcatcggggtccttgacatctacgggtttgagacatttgaaatcaacagctttgagcag
ttttgtatcaactatgccaacgagaaactccagcaacaattcaacatgcatgtattcaag
ctggagcaggaggagtacatgaaagagcagatcccctggactctgatcgatttctatgac
aatcagccctgcatcaacctcatagaggccaagatgggcatcctggatctgttggatgag
gagtgcaagatgcctaaaggttcagacgattcgtgggctcagaaactatacaacactcac
ctaaagacatgttctctcttcgagaagccacgcatgtccaaccgcgccttcattatccaa
cattttgctgacaaggtagaataccagtgtgaaggtttcttggagaagaacaaggacacg
gtgaatgaagatcagatcagtgtgctgaaggccagcaagtttgacctgctggtggagctg
ttccaggatgaggagaaagctaccagtcccactggccaggtccccgggactggaggccgg
acccgcctcagcatcaaaccagacaagagccgtgacacgagcagaaaggagcacaagaag
actgttggctgccagtttcgtaactctcttcaaatgctaatggacactttgaatgccacc
actccacactatgtccgctgtatcaaacccaatgatttcaagttggcgttctcgtttgat
cctaaacgtgccgtgcagcagctcagagcctgtggtgtcctggaaacaatccgcatatct
gctgcaggtttcccgtccaggtggacgtaccaggagttcttcagccgttacagagtgctg
atgaagcagaaagacgtgctgcctgacaagaagttaacctgcaggaatgttctggagaaa
cttgtgcaggatcaggataaataccagtttggtaaaaccaagatattcttcagggctggc
caggttgcttacctggagaagttgagggcagacaagttgcgtgctgcctgcattcgaatc
cagaaaacgatccgctgctggctggcgcgcaagaagtatctgcgcaagcgcaatgctgcc
atcaccatccagaggttcaccagaggataccaggctcgctgcttggccaagttcctgcgc
cgcactcaggcagccaccatcatccagaagtaccagaagatgtacatggagaggaagcgc
tacaggcagaagcaggccgccgcactggccatgcagacgatcctcagagcttacatggcc
cggcagaagtaccaggcgctgctgcgggagcacaaggccgtcatcatacagaagcacatt
cggggctggttggctcgaagctggtacaagcgctgccttgtctccctcgtctacctgcag
tgctgcttccgcaggatgaaggcaaggcgggagttgaagaagctgaagatagaggctcgc
tcagtggagcatttcaagaagctcaacaaaggcatggagaacaagatcatgcagctgcag
aggaagatcgacgagcacgtcaaggacaacaaggtggtcagcgaaaagcttgctggtctg
gagacttcctacacggcagagagcgagcggatgcgtggcgagctgaaccgactacgtgga
gtggaggaggatgccaagaacaaaggcaacaaggttaactccctgctggaggagttggag
aagttgagaaaggagctccgtgtcacgcagcaggagaagaagaccatcgaggactgggcg
caaacctacagggacgaaatggagacgatggtatcagaactgaaggatcagaatggctcg
ttgaagaaagacaaagaggacttgaacagaatgattcaggaacagagtcagcagatgaca
gagaaaatggctcgtttgatagcagaggagactcagcagctggagacggacctgaacgag
gagcgatctcgctaccagaatctcctgagcgaacaccttcgcctcgaggagaaatacgac
gacctgaaggaggagatgtcctcgaacgtctccaagcctggccacaggagaacagattcc
acccacagcagcaacgaatcagagtacacctacaattccgagtacgccgaattggaagaa
ggttcccgtgccggagaagacgtgacacgaggaatggacaccccgctgaccctcaagctg
cagaagcgtctcacagaactagaacaagaaaagcagtcgctgcgcaacgaactggaaaac
aaagaggagcaattccagcgggctagagccagggatgatgcagagtttaaaaaggctcgg
ggggcagagctggagtacgagtccctcaagcgtcaggagctggagtctgagaacaagaag
ctgaaacacaacctggcagagatgaggcaaagcctgctgggtaatgcagctgcaggcgct
ggggctccaggctccccagcctacaaggtgctcttggatcagctcaactcctcctgtgag
gagctggacgtccgcaaggaggaggtgctgatcctgcgctcccagctggttagccagaag
gaagccatgcagcacaaggatgagaaggagaccatgaccgacacgccttcctttgttgag
gatgtgtccaaactgaaggacgctgatgaactcaagcaagcttacatcagcctcaaagac
accaacagatctgctgccccagacttccataagctgaacgaggacggagagctgtggctg
gttaatcagggcttaaaggagaccatcagattactggagcaccagctgcagactcagcgg
agaactaatgacagtgaggtggaggccttgcgtggtgagttgcagaatgtcaaggaggag
aacaaccgtcagcagcagctcctggcacagaacctccagctgcctccagaggcccgaatc
gaagccagtctgcaacacgagatcacccggctcaccaatgagaacctggaactcttggct
gacgaccccacagcatcccgagaggctcgagtcatcattttacgacggatggttgatctc
atggagcagctggagaagcaggaccggaccatccgcaagctcaagaagcagctgaaggtt
tactccaagaggattggagagatgggagcaggtcaaacagagggccagacatctccggga
cagatggtggacgagccaatccacccagtcaacattcctcgcagggagaaagacttccaa
ggaatgctggagtacaagaaggaggatgagctcaaactagtcaagaacctcatccttgag
ctgaagcctcgtggcgttgcagtgaatctgatcccaggtctgccagcttacatccttttc
atgtgtctgagacatgcagactacctcaacgatgaccagaaagtccgcactctgctcacc
tccaccatcaacagtattaagaagatcctgaagaaaagaggagatgattttgaaaccgtc
tccttctggctgtccaacacctgccgcttcttgcactgtctgaaacaatacagcggtgat
ccggccttcatgaagcacaacagttcaaagcagaatgaacacactctgtccaacttcgac
ctggcagagtacagacaggtgatcagcgacctggctatccagatctaccagcagttgatt
aaatgcatggagaacatcctgcatcccatgatagtctctggcatgctggagcacgagacc
atccagggcgtgtcgggggtgaagcccacaggtctccgtaagcgaacgtccagcatcgca
gatgagggcacggataccctcgactccatcctgcggcagctcagcgccttccactccact
atgtgccagcacggcaccgaccccgagctcatcaagcaggtggtgaagcagcagttctac
atcattggagccgtcacccttaacaacctgctgctgcgcaaggacatgtgctcctggagc
aaaggcatgcagatcaggtacaatgtgagccagctggaggagtggctcagagacaaaggt
ctgatgacatgtggagccaaggagactctggagcctctgatccaggctgctcagctgctg
caggtgaagaaaaagaccgatgaggacgccgaagccatctgctccatgtgcctggccctc
accactgctcagatcgtcaaagtcctgaatctctacactccagtcaatgagtttgaggag
agagtgtcaatcgcattcatacgaaccatacagactcgcttgcgtgaccgttgtgacact
ccacaactgttaatggacacgaagatgatttacccagtcaccttcccattcaacccttcc
tcgcttgccttggaaaccatccagatcccaacatcactcaacctagcattcctaacccgt
gtttaa
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integrated database retrieval system
