Scomber japonicus (chub mackerel): 128360051
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Entry
128360051 CDS
T09718
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130-like
KO
K06545
CD163 antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sjo04090
]
128360051
CD molecules [BR:
sjo04090
]
Proteins
128360051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Ig_2
Ig_3
ig
Motif
Other DBs
NCBI-GeneID:
128360051
NCBI-ProteinID:
XP_053176339
LinkDB
All DBs
Position
6:complement(37999098..38068655)
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AA seq
1432 aa
AA seq
DB search
MDLLLMLLLLLWSSGLQAEDEHQSTETVRLVGGASRCAGRLKLKQGEWRPVSYYDWTLKA
AGVACRELDCGSAVSTGSRHESSDRPAWMIRPDCVQSGSTLKDCASSLPFPSSSMVELNC
SAVRLVNGASLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCGAPSVLQGALYGEV
EAPIWTKEFHCGGNESALLDCRRSGSARRTCSPGKAVGLTCSPEPFRLVGGASRCAGRLE
VKQGEWRSVSNLFWTVKESTVVCRELDCGSAVSIGSRDESSDRPVWRIDRDCLQSGSALR
DCVSSGSSSSIVELTCSDSVRLVNGASLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRE
LGCGAPSVLQGELYGEVEAPMWTKEFQCGGNESALLDCRRSDSARRTCSPGKAVGLTCSP
ESVRLVGGASRCAGTLEVNNREWRPVKDSDWTLKEAAVACRELDCGSAVSTGRRDESSDR
PVWRINSDCLQSGSALRDCVSSDSSSSMVELTCSDSVRLVNGTSLCSGRLEVKSEQSWSS
VCEADFDQQDAEVVCRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGHESALLDCRRSDS
ARRTCSPGKAVGLTCSPEPVRLVGGASRCAGTLEVKQGEWRPMSDFVWTLKEAAVACREL
DCGSAVSTGSRDDSDRPVWGITPDCLQSGSALKDCVSSSIFPSSSMVELTCSDSVRLVNG
TSLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCGAPSVLQGALYGEVETPMWTKE
FQCGGHESALLDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRCAGTLEVKQGEWRPV
SDSFWTLKGSAVACRELDCGSAVSAVRRDESSDSPVWMIRPDCVQSGYALRDCVFSFPSS
SSMVELTCSDSVRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCGAPSV
LQGALYGEVEAPMWTQEFQCGGNESALLDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGA
SRCAGTLEVKQGEWRQLSDYDSSWTLKESAVACRELDCGSAVSTGRRDESSYRPVWRIRP
DCLQSGSALRDCVESSGSSSSMLELTCSDSVRLVNGTSLCSGRLEVKSEQSWSSVCEADF
DQQDAEVVCRELDCGAPSVLQGALYGEVEAPMWTQEFQCGGHESALLDCRRSDSARRTCS
PGKAVGLTCSEPFRLVGGASRCAGTLEVKQGEWRPVDYSSWTLKEAAVACRELDCGSAVS
TGSRYESSRIPAWWIRPNCLQSGSALRDCVSFFPGSSSFIVELTCSDLLLQPIISVSPTM
DGVSRAQQQGFQVLQGSSFTISCSVQPQYPGGSFQLTFSSSNTAYNYTQPAVNHSADFLF
PAADPAHQGSYSCVYGVYVFSHNFSSESRLLSLTVTGKLKQSVKLSPTETSH
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctgctgatgctgttgctgttgctgtggagctcaggactccaggctgaagat
gaacaccaatcaacagagactgtcaggttggtgggaggagccagtcgctgtgcaggtaga
ctgaagctgaaacagggagagtggagaccagtgagttactatgactggaccctgaaggca
gcaggtgttgcctgcagagaattggactgtggctctgctgtttcaacaggaagcagacat
gagtcctcagacagacctgcatggatgatcagacctgactgtgttcagtctggatctaca
ctgaaggactgtgcatcatcattaccatttccctcttcctccatggtggagctcaactgc
tcagctgtcaggctggtgaatggggctagtctgtgttcaggcagactggaggtgaagtct
gagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtc
tgtagggagcttggctgtggggctccttcagtcctccagggggcgctctatggagaagtg
gaggctcctatatggaccaaagagttccattgtggaggcaatgagtctgctctcctggac
tgtagaagatcaggctcagctagaagaacctgctcacctggtaaagctgttggactcacc
tgctcaccagagcctttcaggttggtgggaggagccagtcgctgtgcaggtagactggag
gtgaaacagggagagtggagatcagtgagtaaccttttctggaccgtgaaggaatcaact
gttgtctgcagagaattggactgtggctctgctgtttcaataggaagcagagatgagtcc
tcagacagacctgtatggaggatcgaccgtgactgtcttcagtctggatctgcactgagg
gactgtgtatcatcaggttcctcttcctccatcgtggagctcacctgctcagactctgtc
aggctggtgaatggggctagtctgtgttcaggcagactggaggtgaagtctgagcagtcg
tggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagggag
cttggctgtggggctccttcagtcctccagggggagctctatggagaagtggaggctcca
atgtggaccaaagagttccagtgtggaggcaatgagtctgctctcctggactgtagaaga
tcagactcagctagaagaacctgctcacctggtaaagctgttggactcacctgctcacca
gaatctgtcaggttggtgggaggagccagtcgctgtgcaggtacactggaggtgaataat
agagagtggagaccagtgaaagactctgactggaccctgaaggaagcagctgttgcctgt
agagaattggactgtggctctgctgtttcaacaggacgcagagatgagtcctcagacaga
cctgtatggaggatcaactctgactgtcttcagtctggatctgcactgagggactgtgta
tcatcagattcctcttcctccatggtggagctcacctgctcagactctgtcaggctggtg
aatgggactagtctgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcctca
gtgtgtgaagctgactttgaccagcaggatgcagaggtggtctgtagggagcttggctgt
ggggctccttcagtcctccagggggcgctctatggagaagtggaggctccaatgtggacc
aaagagttccagtgtggaggccatgagtctgctctcctggactgtagaagatcagactca
gctagaagaacctgctcacctggtaaagctgttggactcacctgctcaccagagcctgtc
aggttggtgggaggagccagtcgctgtgcaggtacactggaggtgaaacagggagagtgg
agaccaatgagtgactttgtctggaccctgaaggaagcagctgttgcctgcagagaattg
gactgtggctctgctgtttcaacaggaagcagagatgactcagacagacctgtatggggg
atcacacctgactgtcttcagtctggatctgcactgaaggactgtgtatcatcatcaata
tttccctcttcctccatggtggagctcacctgctcagactctgtcaggctggtgaatggg
actagtctgtgttcaggcagactggaggtgaagtctgagcagtcgtggtcctcagtgtgt
gaagctgactttgaccagcaggatgcagaggtggtctgtagggagcttggctgtggggct
ccttcagtcctccagggggcgctctatggagaagtggagactccaatgtggaccaaagag
ttccagtgtggaggccatgagtctgctctcctggactgtagaagatcagactcagctaga
agaacctgctcacctggtaaagctgttggactcacctgctcagagcctgtcaggttggtg
ggaggagccagtcgctgtgcaggtacactggaggtgaaacagggagagtggagaccagtg
agtgactctttctggaccctgaagggatcagctgttgcctgcagagaattggactgtggc
tctgctgtttcagcagtacgcagagatgagtcctcagacagccctgtatggatgatcaga
cctgactgtgttcagtctggatatgcgctgagggactgtgtattctcatttccctcttcc
tcctccatggtggagctcacctgctcagactctgtcaggctggtgaatgggactagtctg
tgttcaggcagactggaggtgaagtctgagcagtcgtggtcctcagtgtgtgaagctgac
tttgaccagcaggatgcagaggtggtctgtagggagcttggctgtggggctccttcagtc
ctccagggggcgctctatggagaagtggaggctccaatgtggacccaagagttccagtgt
ggaggcaatgagtctgctctcctggactgtagaagatcagactcagctagaagaacctgt
tcacctggtaaagctgttggactcacctgctcagagcctgtcaggttggtgggaggagcc
agtcgctgtgcaggtacactggaggtgaaacagggagagtggagacaattgagtgactat
gactcttcctggaccctgaaggaatcagctgttgcctgcagagaattggactgtggctct
gctgtttcaacaggacgtagagatgagtcctcatacagacctgtatggaggatcagacct
gactgtcttcagtctggatctgcactgagggactgtgtagaatcatcaggttcctcttcc
tccatgttggagctcacctgctcagactctgtcaggctggtgaatgggactagtctgtgt
tcaggcagactggaggtgaagtctgagcagtcgtggtcctcagtgtgtgaagctgacttt
gaccagcaggatgcagaggtggtctgtagggagcttgactgtggggctccttcagtcctc
cagggggcgctctatggagaagtggaggctccaatgtggacccaagagttccagtgtgga
ggccatgagtctgctctcctggactgtagaagatcagactcagctagaagaacctgctca
cctggtaaagctgttggactcacctgctcagagcctttcaggttggtgggaggagccagt
cgctgtgcaggtacactggaggtgaaacagggagagtggagaccagtggattactcttcc
tggaccctgaaggaagcagctgttgcctgcagagaattggactgtggctctgctgtttca
acaggaagccgatatgagtcctcacgtatacctgcatggtggatcagacctaactgtctt
cagtctggatctgcactgagggactgtgtatcattttttccaggttcctcttccttcatc
gtggagctcacctgctcagacctgctgcttcagccaatcatctctgtgtctcctaccatg
gacggggtctccagggcccagcagcaggggtttcaggttctccagggctccagcttcacc
attagctgctccgtccagcctcagtacccaggaggctccttccagctcaccttcagctcc
tccaacacagcatacaactacacccagccagctgtcaatcactctgctgatttcctgttt
cctgctgcagaccccgcccaccaaggaagctacagctgtgtttatggcgtctatgttttt
tctcataacttctcctctgagagccgtctgctctctctcactgtcacaggtaagctgaag
cagagtgtgaagctcagtccaactgagacgtcacactga
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