Scomber japonicus (chub mackerel): 128360080
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Entry
128360080 CDS
T09718
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128360080 (rnf169)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128360080 (rnf169)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128360080 (rnf169)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128360080 (rnf169)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
128360080 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128360080
NCBI-ProteinID:
XP_053176367
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Position
6:39323330..39330015
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AA seq
533 aa
AA seq
DB search
MATAGSAGSAAPPGRPASAAGRAVPADRSGSRSGSRSGAACSPREDEGRRCAEPGAPPAC
PLCRSSGSEERVRRRSEAERSSSRPGRRDGDSRREVFVCPAVVLKSADTKHKLLGEDDLR
RRNFHICKDESASVRHDEDPGVVSDSENEEPISRRIRNVSAFVRKTKNSSTASGAQRSRS
CTDPVEDGGKMKTFPQPAAIMDRVCVGHSSSAGILLSSENSRSVSAPVAADRRLPWRAVM
TSSWSTPLGPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRLLEPTIVKSTPRN
LTRGLQKATSYEASPAVLQKWRQIELDRQSLKVNSKATLTSPVPEMQPSAAGDAVASANK
RKLLFDPPPGDSDAFQKQSVKIRVPAIRYGEAAFRGGADFEASGAPEPCGGALFSRKRSF
SPYTKNSGFQACKLMPKDSQGPRKESEHQSTSRRGPKRNQKTKHVDSDRDQDPRRGQIQQ
DRALALKLQRQFDLENQTGRRRSPDKYFLRSWMSNQNRRRRGLRRSRRINKKH
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcagggtccgcagggtccgccgctccgcccggcagaccggccagcgccgcc
gggagggccgtgcccgcggaccggtccggctcccggtcaggctcccggtccggagccgcc
tgcagcccgcgggaggacgaggggaggcggtgcgcggagcccggagccccgccggcctgc
ccgctgtgccggagctccggcagcgaggagcgggtccgcaggaggagcgaggccgagagg
agcagcagcaggccgggcaggagggacggagactcccggagagaagtgttcgtttgtccc
gccgtcgtcctgaagtctgcagacaccaaacacaaactgctgggtgaagatgatctgagg
aggagaaacttccacatctgtaaagacgagtcagcgtcagtccgccatgatgaagatcct
ggggtggtgtctgattcagagaatgaggagccaatcagcaggaggatcagaaacgtctcc
gccttcgtcaggaaaactaaaaactcgtcaaccgccagtggtgctcagaggagtcgcagc
tgtacggacccggtggaggacggagggaagatgaagacgttcccacagccggcggccatc
atggacagagtatgtgtgggccacagctcctcagcaggaatccttctctcctctgagaac
agtcggtcggtctcggctcccgtcgccgccgaccgccgcctcccgtggcgcgcggtgatg
acatcatcgtggtcgacgccgctcggcccggagcgctccgtcagccccgagagcaacgac
agcatctcggaggagctcaaccacttcaagcccatcgtgtgctcgccgtgcacgcccccc
aaacggctgccggacggccgcctgctggagcccaccatcgtcaagtccacgccaaggaac
ctgacgcgcggtctgcagaaggccaccagctacgaggcgagtcccgccgtgctgcagaag
tggcgtcagatcgagctggaccgccagagcctcaaagtgaactccaaagccacgctgacg
agtccggtccctgagatgcagccgagcgccgccggagacgccgtcgcctccgccaacaag
aggaagctgctgttcgacccgccgccgggagactcggacgccttccagaaacagtctgta
aagatccgggtcccggcaatccgctacggcgaggcggccttcagggggggagcggacttc
gaggcgtcgggcgctccggagccgtgcggcggagcgctgttcagccgcaaacgttccttc
tctccctacaccaagaactccggcttccaggcctgtaagttaatgccgaaggactcgcag
ggtcccaggaaggagtccgagcaccagtctacctcccggaggggtccgaagaggaaccag
aagaccaaacacgtggactcggaccgagaccaggacccgaggcggggccagatccagcag
gaccgagcgctggccctgaagctgcagagacagttcgacctggagaaccagaccggccgc
aggaggagccccgataagtacttcctgcggtcctggatgtccaatcagaaccgcaggagg
cggggcctgcggagatcccgacgaatcaacaagaagcactaa
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