Scomber japonicus (chub mackerel): 128360086 Help Entry 128360086         CDS       T09718                                  Symbol col4a3 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04382   Cornified envelope formation sjo04510   Focal adhesion sjo04512   ECM-receptor interaction sjo04518   Integrin signaling sjo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sjo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128360086 (col4a3)    04518 Integrin signaling     128360086 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128360086 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128360086 (col4a3)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     128360086 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sjo04147]     128360086 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:sjo00536]     128360086 (col4a3) Exosome [BR:sjo04147]  Exosomal proteins   Exosomal proteins of other cancer cells    128360086 (col4a3) Glycosaminoglycan binding proteins [BR:sjo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128360086 (col4a3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Pentapeptide Decapeptide Motif Other DBs NCBI-GeneID:  128360086 NCBI-ProteinID:  XP_053176374 LinkDB All DBs Position 6:complement(39998066..40045379) Genome browser AA seq 2292 aa AA seqDB search MRKAQCGDEHMRKAQCGDEHMRKAQCGDEHMRKAQCGDEHMRKAQCGDEHMRKAQCRDEH MRKAQCGDEHMRKAQCGDEHMRKAQCGDEHMRKAQCGDEHMRKAQCGDDHMTGNQCSDVQ PSDSGEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVL GSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSD SWEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSD VQPSDSWEVLGSEVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWE VLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVLGSDVQPSDSWEVCHCSGKS YCHCDGVKGQKGEPGYLGYDGLPGGIGYPGNEGSQGLPGEKGLLGAAGFPGLKGSRGLPG KPGFPGPPGLPGLPGHEGPLGRPGVPGCNGTKGDGGYPGYSGVPGRAGLPGRMGLRGPKG DRLVYPISQDQQGAPGPQGPDGEPGRDGDPGDGGLPGPPGPAGLPGRLGLPGLPGEKGQE GPSPVIPGPQGLKGLRGPPGIPGQKGIKLYAEGPKELKGEPGVDGQKGCRGPSGLPGRLG VKGVKGEYGDPGSLGKPGKDGVPGELGAQGESGDRGYLGPPGTDLIGTDLVGTDLMGTDL IGTDLIGTDLIGTDLIKTDRDRPDRDRPGTDLMGTDLIGTDLIGTDLMGTDLIGTDLIGT DLIGTDLMGTDLIGTDLIGTDLIGTDLIGTDLTVWNYVLLKGQRGVPGPRGPPGAPGEPG LIGFPGLQGEQGVGPTGPQGPQGPPGSSGPRGEPGEPAPFTIGPQGTPGVLGEPGAEGEP GEPGIPVHMGPVDCALSDFLQGDAGLPGATGLKGLSGFPGTRGHEGQTGEKGDVCVVCPV LAGPPGPPGLPGDQGEDGRTGEVGFQGPKGLRGLKGAKGAAGPQGPFGIPGPPGAPGPVG DPGIMHRVGQKGEPGERGGPGPPGLEGQDGAPGFPGSKGLQGQKGNPGPLGPKGDRGPTG ESGSPGLEGQTGPSGPPGIGSPGQPGPLGSVGVGGPRGDPGRPGEKGSPGEIKTSPGEPG QKGTKGLSGNPGPEGVTGIVGVLGSVGPKGERGEDGFSVQGPLGFPGVKGLKGLPGAPGV PSFGIKGRAGPSGPPGMPGPKGDAGIGGPGQQGRLGPQGEDGSVGLQGNLGPQGPAGIPG PPGQDGPTGPKGRRGLDGVPGPMGSDGSCLPGAPGPPGDRGQMGVLGFTGARGPKGAIGD PGLPGVGPMGPPGPYGAPGYNGKPGPVGSIGPKGLRGTDGAPGLPGIRGDMGPPGALGSP GDDGQPGEIGRPGPKGEMGVDGGGGSQGPPGPQGDQGETGPKGLPTPVEMYGDPGEPGDP GSTCLNCLSASCLTLRVHMSQLSVCFLSHPQGPQGPQVSTVCLLPVSPSGSTGLTCLSAS CLTLRVHRVHMSVCFLSHPQGPQSHLSVCFLSHPQGPQVSPVCLLPVSPSGSTGLTGTKG DPGHPGPQGSDGSNGSPGSPGPQGPAGDPGRDGLNGPPGPCGLHGNSGEMGRPGAKGEKG CAGPCGEPGSDGTPGPGGPKGSKGDPSPPGPGSKGCTGEKGQSGCPGFPGVKGQPGDSGD FGPPGSCGPCGPKGLAGPPGCRGLPGAGGGKGCDGPPGVNGPSGPGGLSGNKGAPGDPGP AGSRGNQGQDGIPGPPGEKGAMGAPGVGPRGPDGTKGPAGESSGPTRSGPVSVRPGPARS SPATLGTLVLLVPVVLLALLDLRDSRVVLVLLDLLVLLDILVLRDSAQKESKERPDPPGL RDQTVTTVQTSSRGPGGFQGPPGPPGPGFKGDKGSTGASGDPGAPGCPGDRGQPGEPGGD GRAGPPGLKGLLGDTGITGPVGLKGDEGAPGPAGLQGPPGPPGRRGLEGSDVPREVKVEE GDPGYAGEQGQPGEVGPPGARGRVGYTGSKGVRGRGGLLGRVGFPGLKGDKGNRGFSGPK GTDGPRGAVGAKGLRGQQGSCSPVPEDSFLFTRHSQKLTVPDCPAGSGQVFTGYSLLFIN GNNRAHGQDLGTLGSCLPKFTTMPFLFCNTDSTCRYASRNDYSYWLSTDQSQPDNIPFIS EDSLQLYISRCAVCEAKANVIAVHSQTSVVPDCPGGWDSLWAGYSFVMETGVGAEGSGQP LASPGSCLENFRKIPFIECHGRGTCNYYTDSYSYWLAALNPDDMFSKPKPHSENGEFPGN LISRCRVCVKRP NT seq 6879 nt NT seq  +upstreamnt  +downstreamnt atgaggaaggctcagtgtggagatgaacacatgaggaaagctcagtgtggagatgaacac atgaggaaagctcagtgtggagatgaacacatgaggaaagctcagtgtggagatgaacac atgcggaaagctcagtgtggagatgaacacatgaggaaagctcagtgtagagatgaacac atgaggaaagctcagtgtggagatgaacacatgaggaaagctcagtgtggagatgaacac atgaggaaagctcagtgtggagatgaacacatgaggaaagctcagtgtggagatgaacac atgagaaaggctcagtgtggagatgaccacatgactgggaaccagtgttctgacgtccag ccgagtgattccggggaggttttaggttctgacgtccagccgagtgattcctgggaggtt ttaggttccgacgtccagccgagtgattcctgggaggttttaggttccgacgtccagccg agtgattcctgggaggttttaggttccgacgtccagccgagtgattcctgggaggtttta ggttccgacgtccagccgagtgattcctgggaggttttaggttccgacgtccagccgagt gattcctgggaggttttaggttctgacgtccaaccgagtgattcctgggaggttttaggt tccgacgtccagccgagtgattcctgggaggttttaggttccgacgtccagccgagtgat tcctgggaggttttaggttccgacgtccagccgagtgattcctgggaggttttaggttcc gacgtccagccgagtgattcctgggaggttttaggttctgacgtccagccgagtgattcc tgggaggttttaggttccgacgtccagccgagtgattcctgggaggttttaggttccgac gtccagccgagtgattcctgggaggttttaggttctgaagtccagccgagtgattcctgg gaggttttaggttctgacgtccagccgagtgattcctgggaggttttaggttccgacgtc cagccgagtgattcctgggaggttttaggttccgacgtccagccgagtgattcctgggag gttttaggttccgacgtccagccgagtgattcctgggaggttttaggttctgacgtccag ccgagtgattcctgggaggttttaggttctgacgtccagccgagtgattcctgggaggtt ttaggttccgacgtccagccgagtgattcctgggaggtttgtcactgcagcgggaaatcc tactgtcactgtgacggggtcaaaggtcagaagggagagcctggttaccttggatatgac gggcttcctggagggattggttaccctggaaacgaaggtagccaggggttacctggagag aagggtttgttgggagcagcaggatttccaggactgaaaggctctcggggacttccagga aaaccaggttttccaggaccaccaggactgccgggactgcccggccacgaaggacccctc ggccgacccggagtcccaggatgcaacgggacgaagggggacggcggttacccagggtac tccggggttccaggacgagcaggcctgccaggccggatgggactccgagggccgaagggc gacaggctggtctaccccatcagtcaggaccagcaaggggcccccggcccccaggggccc gacggagagccggggcgtgatggagatccaggtgacggaggtctgccaggaccaccagga cctgctggacttcctggcagactggggttgccagggttaccgggagaaaagggtcaggag ggtcctagtccagtgatcccgggtccccaaggcctaaagggtctccgtggtcctccaggg atccccggacagaaagggatcaaactgtacgctgaaggacctaaagaactgaagggtgaa ccaggtgtagatggacagaaaggttgtcgtggaccttctggtttgccggggagactcggt gtgaaaggagtgaagggcgagtatggcgaccccggctcattaggtaaacccgggaaggac ggagtccctggagagctcggagcacagggggagtcgggggatcgtggatacctcggtcct ccagggacagacctgataggaacagacctggtagggacagacctgatggggacagacctg ataggaacagacctgataggaacagacctgataggaacagacctgataaagactgatagg gacagacctgatagggacagacctggaacagacctgatggggacagacctgatagggaca gacctgataggaacagacctgatggggacagacctgatagggacagacctgataggaaca gacctgataggaacagacctgatggggacagacctgataggaacagacctgatagggaca gacctgatagggacagacctgatagggacagacctgacagtctggaactacgtattactg aagggccagcgcggagtcccggggccacgcggacccccaggggcccccggagagccagga ctcatcgggtttcctggactgcagggcgagcaaggtgtgggtcctaccggccctcagggc ccccaggggccgccaggctcctccggaccaagaggagaaccaggagaaccggctcccttc accatcgggccccaaggaacgccgggagtactgggagaaccgggagccgagggggaacca ggagaacccggaataccagtccacatgggtccagttgactgtgctctgtcagacttcctg cagggggacgccggactgccgggggccaccgggctgaaaggtctcagcgggttcccaggg acccgaggacacgagggacagacaggtgagaagggggacgtgtgtgtggtctgtccggtt cttgcggggcccccaggacctccaggtttaccaggagatcagggtgaagacgggaggaca ggtgaagtcgggtttcaaggacccaaaggtctcagaggactgaaaggtgctaaaggagca gccggtccacagggccccttcgggatccctggacccccaggggcccccggtcctgtgggt gaccccggcatcatgcacagagtggggcagaagggagagcctggggagaggggggggccg ggaccgccaggcctggaggggcaggacggagcgccgggattcccaggatccaaaggtctc cagggccagaaaggaaacccagggcctctggggcctaaaggggaccggggcccgactgga gagtctggttctccaggactggaaggacagacgggaccttcaggacctccaggtatcggc agtcctggacagccaggtccactaggcagtgtgggggtggggggaccacgaggagatcct ggaagaccaggggagaaaggttctcctggtgagattaaaaccagtccaggagaaccggga cagaaagggaccaaaggtttatctggaaacccaggacctgaaggtgtgacggggattgtt ggggtcctggggtctgtcggtccgaagggagagagaggagaggacggcttctctgtgcag gggcccctcggcttcccaggggtcaaaggactgaagggtctcccaggagctccaggcgtg cccagttttggaatcaagggccgtgcggggccgtcgggacccccggggatgccgggcccc aagggggacgctggtatcgggggccccggccagcaaggcaggttagggccccagggagaa gatgggtctgtgggactccaaggaaacctggggccccaaggacccgctggaataccagga cctccaggacaagatggaccaacaggacccaaaggtcggaggggtctggacggcgttccc ggtccgatgggctcggatggaagttgtctacctggagctccgggacctccaggagaccgg ggacagatgggcgtcctcggcttcacaggagcccggggcccaaagggtgcgataggggac cctgggctgccgggcgtaggacccatgggccctccaggaccatacggggccccggggtat aatggaaaaccgggaccagtgggtagcatcggaccaaagggactgagagggaccgatgga gcaccaggactcccaggtatcaggggggacatgggtcctccaggagccctgggtagtcca ggagatgatggacaaccaggagagatcggaagaccaggaccaaaaggtgagatgggtgtg gacggcggtggaggttctcaggggcctccaggacctcagggggaccaaggggagaccgga cccaaaggactgcccactcctgtggagatgtacggagatcctggagaacctggagaccct gggtccacatgtctcaactgtctgtctgcttcctgtctcaccctcagggtccacatgtct caactgtctgtctgcttcctgtctcaccctcagggtccacagggtccacaggtctcaact gtctgtctgcttcctgtctcaccctcagggtccacaggtctcacctgtctgtctgcttcc tgtctcaccctcagggtccacagggtccacatgtctgtctgcttcctgtctcaccctcag ggtccacagtctcacctgtctgtctgcttcctgtctcaccctcagggtccacaggtctca cctgtctgtctgcttcctgtctcaccctcagggtccacaggtctaactggtactaaagga gatccgggccacccaggacctcaaggctctgatggcagtaatggttcacctggaagtcct ggaccacaaggacctgctggggacccgggccgagacggactgaatggtccccctggtccc tgtggtctccatggtaactccggtgaaatgggaagaccaggtgctaaaggagagaagggc tgtgcaggaccgtgtggggaacccggttctgatgggacaccaggaccaggagggcctaaa ggttctaaaggagacccgagtccaccaggacccggatctaaaggatgcaccggagagaag ggacagtcaggatgtcccgggtttccaggtgtaaagggacaaccaggagacagtggagac tttggtcctccaggatcttgtggtccctgtggtcctaaaggactcgctggacccccgggc tgcagaggtctccctggagcggggggggggaaggggtgcgacggtcctccaggagtcaac ggtccttctggtcccggtggactctcaggtaataagggggcacctggagatcctggtcca gctggatccagagggaaccagggacaagacgggatcccgggtccacctggggagaaagga gccatgggagctcctggagtcggacctcgaggaccagacgggactaaaggtccagcaggt gagtcctccggtccgacccggtccggcccggtctcggtccgacccggtccggcccggtcc agcccggctacgctggggaccttggtcctcctggtccctgtggtcctcctggcccttctg gacctgcgggacagccgggttgtcctggtccttctggacctcctggtgctcctggatatc ctggttctgagggactctgcacagaaggagtcaaaggagagaccggatcccccggggctc agggaccaaacggtgactacagtccagacctcttccagaggtcctggtggctttcagggt cctcctggtcctccaggtcctggttttaaaggagacaaagggtctacgggagcgtcaggt gatcctggagcgcctggttgccccggcgaccgcggccaaccgggcgagccggggggcgat ggacgagcaggcccacctggactcaaaggcctgctgggagacactggcatcacaggacct gttggtttaaagggggacgaaggggcaccaggtcctgcaggtttacagggacctccggga cctcctgggagaaggggtctggaggggagcgatgtaccgagggaggtgaaggtggaggaa ggagacccgggctatgctggagaacagggccaacccggagaagtaggacccccaggggcc cgaggacgggtcgggtatacagggtctaaaggcgtccgagggaggggcggtctacttgga cgggtcgggtttcctggactgaaaggggacaaagggaaccgaggattctctggaccaaaa ggtaccgatggtccacgaggtgccgtcggagctaaaggtctccggggtcagcagggttca tgcagcccggtaccagaggacagcttcctgttcaccagacacagccagaagctgactgtc ccagactgtcctgcaggatccggtcaggtcttcaccggatactctctgctgttcatcaac gggaacaaccgggctcacggacaagacctggggacgctgggcagctgtcttcctaagttc accaccatgccgttcctgttctgtaacaccgacagcacctgccgctacgcctcacgcaac gactactcctattggctgtccaccgaccaatcacagccagacaacatcccctttatctct gaggattcactgcagctttacatcagcaggtgtgctgtgtgtgaggccaaagccaacgtg atcgccgtccacagtcagaccagcgtggttccagactgtcccggcggctgggactctctg tgggccggctactccttcgtcatggagaccggtgtgggagccgaggggtcgggtcagccg ctggcctcacctggatcctgtctggaaaacttccggaagattcccttcatcgagtgtcac ggccgaggaacctgcaactactacaccgactcctacagctactggctggctgcactcaac cctgacgacatgttcagcaaaccgaagcctcacagtgaaaatggagaatttccaggaaat ctgatcagccgctgtcgagtctgcgtgaagcgcccgtaa

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