Scomber japonicus (chub mackerel): 128360087 Help Entry 128360087         CDS       T09718                                  Symbol col4a4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04382   Cornified envelope formation sjo04510   Focal adhesion sjo04512   ECM-receptor interaction sjo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sjo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128360087 (col4a4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128360087 (col4a4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128360087 (col4a4)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     128360087 (col4a4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sjo04147]     128360087 (col4a4)    00536 Glycosaminoglycan binding proteins [BR:sjo00536]     128360087 (col4a4) Exosome [BR:sjo04147]  Exosomal proteins   Exosomal proteins of other cancer cells    128360087 (col4a4) Glycosaminoglycan binding proteins [BR:sjo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128360087 (col4a4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  128360087 NCBI-ProteinID:  XP_053176375 LinkDB All DBs Position 6:40078892..40121621 Genome browser AA seq 1747 aa AA seqDB search MPSPSRHRACSVTSDTPSPSRHRACSVTSDMPSPSRHRACSVTSDTPSPSRHRACSVTSD TPSPSPHRAVTELPVLMSSWYLSSWYLSSWYLSPWYLSSCPPGTYPPVLLGDLTEPCGGR DCSTCQCFPAKGARGAPGPLGRQGPQGPPGFPGPQGPPGEKGHRGNEGPTGASGLKGDMG NVGVPGFPGLEGLPGHPGPAGGPGFPGLDGCNGTRGDRGESGFPGDPGPDGEPGSPGLKG FPGDPAIYFIHYPGIPGDVGPSGLPGPQGKKGLSGLSGALGPAGPLGSNGFPGVPGSRGP PGEKGRSLPGQKGDEGEQGLQGPPGPFEYVDPPEDLYIKGEQGPPGFKGLCGTQGFPGLD ALPGIKGEKGIVGFPGSRGFSGRPGWRGEKGVKGTLGSPGLPGLIGREGLKGMIGDPGPK GQPYDAVVTHTGDLGAPGDPGQSGPPGDMGFMGTHGPPGAPGRPIPGPAGARGQMGVPGS RGDRGEPGQVFVGEPTPGEPGKPGRPGPQGPKGEPGSPGRYCLPGAPGLSGEPGEAGPPG AQGFQGFKGDRGECRCGPSVTLIGPPGTEGAAGSPGFPGVSGTPGLRGERGSPGDPGVGG TQGLGGFPGITGFKGQKGDFSVVDIKGEKGNIGEEGPAGRQGFSGRRGAEGFAGAPGTPG PQGDSFSGPPGDRGLPGLSGSDGAAGSSGPPGPAVVGAVGQRGDPGAPGPPGFPGPPGPK GVKGDTLPCVPRNPGAPGQKGETGNNGYRGLPGPPGFRGNTGPDGPKGDEGHSGVTGPPG RQGPPGVVGDTGDEGPEGLSYGGEPGSPGLPGSPGLRGPAGDSDVGSSGPVGFPGPLGSQ GPKGVPGPPGNDGLPGVLGLPGGPGPRGQRGHDGAPGTAGPQGRTPVSCDKGKPGARGLF GPQGPIGPPGFLGEKGDLGEVGPVGFGPKGATGKPGSPGLPGHPGLQGPVGSIGDSGLPG SGGGKGLMGPLGRDGGPGAPGWTGAPGVPGQRGERGFSGRDGAPGCEGLKGAKGCRGAPG PPGDTLCIPIKGERGKQGPSGLNGFPGPRGSKGVRGADGKPGYPGTCGPLGSIGPPGPPG PCGKPGLPGPPGRPGAPGLIGFPGETGDQGDLGCPGQPGKPGHPGCPGLKGDKGESVGCT GPPGDKGPRGDSGPSGPVGPRGDPGRPGFIGAPGQKGCKGDPGHQGETGSAGVVGPPGPR GRPGPAGVPGEAGADGPPGEQGCPGLKGPPGPLGLHGLDGLKGVKGDMGTRGLGVQGTQG CQGIPGDKGPPGPPGPCGSSQPGPPGPNGPLGPKGPPGECGPLGNPGPDCKDPIQGPPGE HGCPGPDGEPGCPGNIGEPGLNPPIPGDDGDNGGPGCQGPKGENGFPGATGLPGIAGNPG LKGKRGSTGLMGLPGNRGPGGCPGPAGPPGPKGSAGPVGPKGEMGRVSPCPRYPPAPQGP PGPPGIPGLPGSAGLPGESGLMGLTGKKGDQGALGQIGPVGPPGQDGDTGNPGLQGESGV DGAKGDPGVIGDRGPPGPSRILNTGFLLVMHSQSKTVPSCPSSMATLWVGYSLLYLEGQE KAHTQDLGQAGSCMRVFSTMPFSSCNMGTCSYASRNDKSYWLSTTAAVPSIPVGGASIKE HISRCVVCEAPSAPVALHSQTSTQPNCPPNWRSLWTGYSFLMHTGAGDEGGGQSLTSSGS CLTDFRAQPFVECQGPRGTCHYFANIYSFWLTTVDGTASSSDMSSSTLTEGQQQRRNIGR CNVCMRE NT seq 5244 nt NT seq  +upstreamnt  +downstreamnt atgccgtcaccgagccgtcaccgagcgtgctcagtgaccagcgacacgccgtcaccgagc cgtcaccgagcgtgctcagtgaccagcgacatgccgtcaccgagccgtcaccgagcgtgc tcagtgaccagcgacacgccgtcaccgagccgtcaccgagcgtgctcagtgaccagcgac acgccgtcaccgagccctcaccgagccgtcaccgagctacctgtcctcatgtcctcctgg tacctgtcctcctggtacctgtcctcctggtacctgtccccctggtacctgtcctcctgt cctcctggtacctatcctcctgtcctactgggcgacctgacggagccatgtggtgggcgg gactgctccacctgtcagtgttttccagccaaaggagcaaggggagctccaggtcctttg ggacggcagggccctcagggtcccccaggtttccccggcccacaggggcctccaggagag aagggccaccgaggaaacgagggtcccaccggagcttcaggactgaagggagacatgggg aatgtcggcgttcctggttttcctgggttagaaggactcccgggtcatccaggtccagcc ggaggtcccgggtttccaggtctggatggatgtaatgggaccagaggagaccgaggagag tctggatttcctggagatccaggacctgatggagaaccgggttcaccaggactgaaggga tttccaggagatccagcgatctacttcatacattaccccgggatacccggggacgtcggg cccagcggactacctggtccacagggtaagaagggcttatcaggtctgagtggagctctg ggtcctgcaggaccgctggggtccaacggttttcctggtgttcctggttccagaggtcca cctggagagaaaggtcggtctctgcccggacagaaaggagacgagggggagcagggcctc caggggcctccagggccgtttgagtacgtggaccctccagaggacctttacattaaagga gaacagggtccaccaggcttcaaaggtctctgtggcactcaggggttcccgggtctggac gctcttccaggaatcaaaggagagaaagggattgtgggatttccgggatccaggggattc tctggacgtcccggctggcgaggtgaaaaaggagtcaagggaactctgggaagtcctggt cttccaggtctgattggacgagaaggtctgaagggcatgattggagatccgggtcctaaa ggccaaccctacgacgcagtggtcacccacacaggtgacctcggggcccccggggaccca ggacagagcggccccccaggagacatgggcttcatgggaacacacggccccccaggggcc cctggcaggcccatccccggaccagcaggtgccaggggtcagatgggagttccagggtcc agaggggaccgaggagaaccgggtcaagtatttgtaggtgaacccacacctggagaaccc gggaaaccaggacgcccaggaccccaagggcccaaaggagaaccagggagtccaggtcgg tattgtctccccggggctccaggactctctggggagccaggagaggcggggcctccgggg gcccaaggcttccaagggttcaaaggtgaccgtggggagtgtcggtgtggcccctccgtt actctgatcgggccccctggcactgaaggggccgcagggtctccggggttcccgggggtc tcggggactccaggtctgagaggtgagagagggtcacctggagaccctggagtgggcggg acacagggcttgggcggcttcccaggtatcacagggttcaaaggtcagaagggagatttc agtgtggtggatattaaaggtgagaaaggaaacataggtgaggagggtccagcgggccgg cagggcttctcagggaggagaggagccgaagggttcgccggggcccccgggacccccggc ccccagggcgacagcttctccgggcctccgggggaccgcggcctcccggggctgtcgggc tcagacggggcggccggctcctccggacctccaggaccagccgtggtcggagcagtgggg cagcgcggagacccgggggccccggggcctccagggttcccggggcccccggggcccaaa ggggtcaaaggagacaccctgccgtgtgtacccaggaatcctggcgctcctggacagaaa ggagagacgggaaataacggctacagaggacttccgggtcctccaggtttccgtggcaac actggacctgatggaccaaaaggagatgaaggacattctggagttactggacctccagga cgacaaggacctccgggggttgtcggagatacgggagacgaaggacctgaaggcctcagt tatggtggagagccaggctctccggggctaccaggttctcctggattgaggggaccagct ggagactctgatgttgggtcttctggacccgtcggcttcccagggccactgggttcacag ggacctaaaggggtccctggcccccctggcaacgatggattaccaggtgtcctcggtctg cctggaggccccgggccccggggccagagaggacatgatggggcaccgggaacagctggt ccccaaggacgcacaccggtctcatgcgataaaggaaagcctggtgccagggggctcttt ggcccccaaggacccattggacccccaggatttctgggggaaaagggggacctgggtgag gttggccctgtgggttttggccctaaaggcgctactggtaaacccggctctccagggctt cctgggcacccgggacttcagggccctgttggctccatcggagactctggactaccaggt tcaggtggtgggaaaggtctgatggggcctctgggcagggacgggggtccaggggcccca ggatggactggggctcctggagttccagggcagagaggggagagagggttcagtggacgg gatggagctccaggatgtgaaggccttaaaggagccaaaggctgcagaggggccccggga cccccaggagacaccctgtgcatccccatcaaaggcgagagaggaaaacagggtccttcc ggcctgaatgggttccccggacctcgaggaagtaaaggtgtgcgcggtgctgatggtaag ccagggtatccgggcacctgcgggcccctaggcagcattggacccccaggaccccctggg ccctgtggcaagccaggacttccaggaccacctggacgtccaggagctccaggacttatt ggcttccccggagagacaggagatcaaggggacctgggatgtcccggtcagccgggtaag cctggccacccaggatgtcctggactcaaaggtgataaaggagagtcagtgggttgtact ggtccacctggagacaaggggcctcgtggagactctggaccctcaggtccagttggacct cggggggatccaggacgcccaggtttcattggggctccggggcagaaaggttgcaaagga gatccaggccaccagggagaaacaggatcagcaggtgtggtgggccccccaggtcccaga ggtcgaccaggtcctgcaggtgttcctggtgaggccggtgctgatggtcctccaggggaa cagggctgcccgggactcaaaggtcctcctggaccactgggacttcatggactggatgga ctgaaaggagtgaaaggagacatgggcactagaggtctaggtgttcaaggtactcaaggg tgccaaggtattccaggggataagggacctccaggccctccaggcccttgtggttcatcc cagcctgggcctccaggacctaatggccccctaggacccaaaggaccaccaggtgaatgt ggacctctaggtaatccaggcccagactgtaaagacccaatccaagggcctcctggagaa catggttgccctggaccagatggagagccggggtgccctggtaacatcggggagccaggt ctaaatcctcccatacccggagatgatggggacaatgggggcccagggtgccaagggcca aagggagaaaatgggtttccaggggccacaggactgccaggcatagctggaaatccaggg ttgaaaggcaagcggggttctacaggcctgatgggactacctgggaatcggggtcctgga ggttgtcctggtcctgctggacctccaggaccgaagggatctgctggaccagttggtccc aagggggagatgggccgagtctctccctgcccaagatacccacctgcaccacagggccca cctggcccccctggcatcccaggtctgcctggaagtgctggcctcccaggagagagtggc ctcatgggactcacaggtaagaaaggggaccaaggggctctagggcaaattggccccgtg gggccaccaggtcaagatggagacacaggaaatccaggcctacagggggagagtggagtc gatggagccaagggtgatccaggtgtaattggtgaccgcggaccccccgggccatccaga atcctaaacacggggttcctgttggtgatgcacagccagtcaaagacggttccctcctgt ccatcaagtatggcaactctgtgggttggatacagcctgctgtacctggagggtcaggag aaggcccacactcaggacctgggtcaggccgggtcgtgcatgcgggtcttttccaccatg cctttctcctcctgcaatatgggaacttgttcttacgccagccgcaacgataaatcctac tggctgtcgaccacggcggcggttcccagtataccagtgggaggagcctccatcaaggaa cacatcagtcgctgcgtggtatgtgaagccccctccgcccccgtcgctctgcacagccag acctccacccaaccaaactgcccccccaactggaggagcctgtggaccggatactccttc ctgatgcatacaggtgcaggtgatgagggtggtggacagtctctgacatcatcaggaagc tgcctgacagacttcagggcccagccctttgtggagtgccaggggcctcgaggcacctgc cactactttgccaacatctacagcttctggctgaccacagtggacggcacggcctcgtcc tccgacatgtcgtccagcacgctgacggagggccagcagcagaggaggaacatcgggagg tgtaacgtctgcatgagggagtga

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