Scomber japonicus (chub mackerel): 128360087 Help Entry 128360087         CDS       T09718                                  Symbol col4a4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04510   Focal adhesion sjo04512   ECM-receptor interaction sjo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sjo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128360087 (col4a4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128360087 (col4a4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128360087 (col4a4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sjo04147]     128360087 (col4a4)    00536 Glycosaminoglycan binding proteins [BR:sjo00536]     128360087 (col4a4) Exosome [BR:sjo04147]  Exosomal proteins   Exosomal proteins of other cancer cells    128360087 (col4a4) Glycosaminoglycan binding proteins [BR:sjo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128360087 (col4a4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  128360087 NCBI-ProteinID:  XP_053176375 LinkDB All DBs Position 6:40078892..40121621 Genome browser AA seq 1747 aa AA seqDB search MPSPSRHRACSVTSDTPSPSRHRACSVTSDMPSPSRHRACSVTSDTPSPSRHRACSVTSD TPSPSPHRAVTELPVLMSSWYLSSWYLSSWYLSPWYLSSCPPGTYPPVLLGDLTEPCGGR DCSTCQCFPAKGARGAPGPLGRQGPQGPPGFPGPQGPPGEKGHRGNEGPTGASGLKGDMG NVGVPGFPGLEGLPGHPGPAGGPGFPGLDGCNGTRGDRGESGFPGDPGPDGEPGSPGLKG FPGDPAIYFIHYPGIPGDVGPSGLPGPQGKKGLSGLSGALGPAGPLGSNGFPGVPGSRGP PGEKGRSLPGQKGDEGEQGLQGPPGPFEYVDPPEDLYIKGEQGPPGFKGLCGTQGFPGLD ALPGIKGEKGIVGFPGSRGFSGRPGWRGEKGVKGTLGSPGLPGLIGREGLKGMIGDPGPK GQPYDAVVTHTGDLGAPGDPGQSGPPGDMGFMGTHGPPGAPGRPIPGPAGARGQMGVPGS RGDRGEPGQVFVGEPTPGEPGKPGRPGPQGPKGEPGSPGRYCLPGAPGLSGEPGEAGPPG AQGFQGFKGDRGECRCGPSVTLIGPPGTEGAAGSPGFPGVSGTPGLRGERGSPGDPGVGG TQGLGGFPGITGFKGQKGDFSVVDIKGEKGNIGEEGPAGRQGFSGRRGAEGFAGAPGTPG PQGDSFSGPPGDRGLPGLSGSDGAAGSSGPPGPAVVGAVGQRGDPGAPGPPGFPGPPGPK GVKGDTLPCVPRNPGAPGQKGETGNNGYRGLPGPPGFRGNTGPDGPKGDEGHSGVTGPPG RQGPPGVVGDTGDEGPEGLSYGGEPGSPGLPGSPGLRGPAGDSDVGSSGPVGFPGPLGSQ GPKGVPGPPGNDGLPGVLGLPGGPGPRGQRGHDGAPGTAGPQGRTPVSCDKGKPGARGLF GPQGPIGPPGFLGEKGDLGEVGPVGFGPKGATGKPGSPGLPGHPGLQGPVGSIGDSGLPG SGGGKGLMGPLGRDGGPGAPGWTGAPGVPGQRGERGFSGRDGAPGCEGLKGAKGCRGAPG PPGDTLCIPIKGERGKQGPSGLNGFPGPRGSKGVRGADGKPGYPGTCGPLGSIGPPGPPG PCGKPGLPGPPGRPGAPGLIGFPGETGDQGDLGCPGQPGKPGHPGCPGLKGDKGESVGCT GPPGDKGPRGDSGPSGPVGPRGDPGRPGFIGAPGQKGCKGDPGHQGETGSAGVVGPPGPR GRPGPAGVPGEAGADGPPGEQGCPGLKGPPGPLGLHGLDGLKGVKGDMGTRGLGVQGTQG CQGIPGDKGPPGPPGPCGSSQPGPPGPNGPLGPKGPPGECGPLGNPGPDCKDPIQGPPGE HGCPGPDGEPGCPGNIGEPGLNPPIPGDDGDNGGPGCQGPKGENGFPGATGLPGIAGNPG LKGKRGSTGLMGLPGNRGPGGCPGPAGPPGPKGSAGPVGPKGEMGRVSPCPRYPPAPQGP PGPPGIPGLPGSAGLPGESGLMGLTGKKGDQGALGQIGPVGPPGQDGDTGNPGLQGESGV DGAKGDPGVIGDRGPPGPSRILNTGFLLVMHSQSKTVPSCPSSMATLWVGYSLLYLEGQE KAHTQDLGQAGSCMRVFSTMPFSSCNMGTCSYASRNDKSYWLSTTAAVPSIPVGGASIKE HISRCVVCEAPSAPVALHSQTSTQPNCPPNWRSLWTGYSFLMHTGAGDEGGGQSLTSSGS CLTDFRAQPFVECQGPRGTCHYFANIYSFWLTTVDGTASSSDMSSSTLTEGQQQRRNIGR CNVCMRE NT seq 5244 nt NT seq  +upstreamnt  +downstreamnt atgccgtcaccgagccgtcaccgagcgtgctcagtgaccagcgacacgccgtcaccgagc cgtcaccgagcgtgctcagtgaccagcgacatgccgtcaccgagccgtcaccgagcgtgc tcagtgaccagcgacacgccgtcaccgagccgtcaccgagcgtgctcagtgaccagcgac acgccgtcaccgagccctcaccgagccgtcaccgagctacctgtcctcatgtcctcctgg tacctgtcctcctggtacctgtcctcctggtacctgtccccctggtacctgtcctcctgt cctcctggtacctatcctcctgtcctactgggcgacctgacggagccatgtggtgggcgg gactgctccacctgtcagtgttttccagccaaaggagcaaggggagctccaggtcctttg ggacggcagggccctcagggtcccccaggtttccccggcccacaggggcctccaggagag aagggccaccgaggaaacgagggtcccaccggagcttcaggactgaagggagacatgggg aatgtcggcgttcctggttttcctgggttagaaggactcccgggtcatccaggtccagcc ggaggtcccgggtttccaggtctggatggatgtaatgggaccagaggagaccgaggagag tctggatttcctggagatccaggacctgatggagaaccgggttcaccaggactgaaggga tttccaggagatccagcgatctacttcatacattaccccgggatacccggggacgtcggg cccagcggactacctggtccacagggtaagaagggcttatcaggtctgagtggagctctg ggtcctgcaggaccgctggggtccaacggttttcctggtgttcctggttccagaggtcca cctggagagaaaggtcggtctctgcccggacagaaaggagacgagggggagcagggcctc caggggcctccagggccgtttgagtacgtggaccctccagaggacctttacattaaagga gaacagggtccaccaggcttcaaaggtctctgtggcactcaggggttcccgggtctggac gctcttccaggaatcaaaggagagaaagggattgtgggatttccgggatccaggggattc tctggacgtcccggctggcgaggtgaaaaaggagtcaagggaactctgggaagtcctggt cttccaggtctgattggacgagaaggtctgaagggcatgattggagatccgggtcctaaa ggccaaccctacgacgcagtggtcacccacacaggtgacctcggggcccccggggaccca ggacagagcggccccccaggagacatgggcttcatgggaacacacggccccccaggggcc cctggcaggcccatccccggaccagcaggtgccaggggtcagatgggagttccagggtcc agaggggaccgaggagaaccgggtcaagtatttgtaggtgaacccacacctggagaaccc gggaaaccaggacgcccaggaccccaagggcccaaaggagaaccagggagtccaggtcgg tattgtctccccggggctccaggactctctggggagccaggagaggcggggcctccgggg gcccaaggcttccaagggttcaaaggtgaccgtggggagtgtcggtgtggcccctccgtt actctgatcgggccccctggcactgaaggggccgcagggtctccggggttcccgggggtc tcggggactccaggtctgagaggtgagagagggtcacctggagaccctggagtgggcggg acacagggcttgggcggcttcccaggtatcacagggttcaaaggtcagaagggagatttc agtgtggtggatattaaaggtgagaaaggaaacataggtgaggagggtccagcgggccgg cagggcttctcagggaggagaggagccgaagggttcgccggggcccccgggacccccggc ccccagggcgacagcttctccgggcctccgggggaccgcggcctcccggggctgtcgggc tcagacggggcggccggctcctccggacctccaggaccagccgtggtcggagcagtgggg cagcgcggagacccgggggccccggggcctccagggttcccggggcccccggggcccaaa ggggtcaaaggagacaccctgccgtgtgtacccaggaatcctggcgctcctggacagaaa ggagagacgggaaataacggctacagaggacttccgggtcctccaggtttccgtggcaac actggacctgatggaccaaaaggagatgaaggacattctggagttactggacctccagga cgacaaggacctccgggggttgtcggagatacgggagacgaaggacctgaaggcctcagt tatggtggagagccaggctctccggggctaccaggttctcctggattgaggggaccagct ggagactctgatgttgggtcttctggacccgtcggcttcccagggccactgggttcacag ggacctaaaggggtccctggcccccctggcaacgatggattaccaggtgtcctcggtctg cctggaggccccgggccccggggccagagaggacatgatggggcaccgggaacagctggt ccccaaggacgcacaccggtctcatgcgataaaggaaagcctggtgccagggggctcttt ggcccccaaggacccattggacccccaggatttctgggggaaaagggggacctgggtgag gttggccctgtgggttttggccctaaaggcgctactggtaaacccggctctccagggctt cctgggcacccgggacttcagggccctgttggctccatcggagactctggactaccaggt tcaggtggtgggaaaggtctgatggggcctctgggcagggacgggggtccaggggcccca ggatggactggggctcctggagttccagggcagagaggggagagagggttcagtggacgg gatggagctccaggatgtgaaggccttaaaggagccaaaggctgcagaggggccccggga cccccaggagacaccctgtgcatccccatcaaaggcgagagaggaaaacagggtccttcc ggcctgaatgggttccccggacctcgaggaagtaaaggtgtgcgcggtgctgatggtaag ccagggtatccgggcacctgcgggcccctaggcagcattggacccccaggaccccctggg ccctgtggcaagccaggacttccaggaccacctggacgtccaggagctccaggacttatt ggcttccccggagagacaggagatcaaggggacctgggatgtcccggtcagccgggtaag cctggccacccaggatgtcctggactcaaaggtgataaaggagagtcagtgggttgtact ggtccacctggagacaaggggcctcgtggagactctggaccctcaggtccagttggacct cggggggatccaggacgcccaggtttcattggggctccggggcagaaaggttgcaaagga gatccaggccaccagggagaaacaggatcagcaggtgtggtgggccccccaggtcccaga ggtcgaccaggtcctgcaggtgttcctggtgaggccggtgctgatggtcctccaggggaa cagggctgcccgggactcaaaggtcctcctggaccactgggacttcatggactggatgga ctgaaaggagtgaaaggagacatgggcactagaggtctaggtgttcaaggtactcaaggg tgccaaggtattccaggggataagggacctccaggccctccaggcccttgtggttcatcc cagcctgggcctccaggacctaatggccccctaggacccaaaggaccaccaggtgaatgt ggacctctaggtaatccaggcccagactgtaaagacccaatccaagggcctcctggagaa catggttgccctggaccagatggagagccggggtgccctggtaacatcggggagccaggt ctaaatcctcccatacccggagatgatggggacaatgggggcccagggtgccaagggcca aagggagaaaatgggtttccaggggccacaggactgccaggcatagctggaaatccaggg ttgaaaggcaagcggggttctacaggcctgatgggactacctgggaatcggggtcctgga ggttgtcctggtcctgctggacctccaggaccgaagggatctgctggaccagttggtccc aagggggagatgggccgagtctctccctgcccaagatacccacctgcaccacagggccca cctggcccccctggcatcccaggtctgcctggaagtgctggcctcccaggagagagtggc ctcatgggactcacaggtaagaaaggggaccaaggggctctagggcaaattggccccgtg gggccaccaggtcaagatggagacacaggaaatccaggcctacagggggagagtggagtc gatggagccaagggtgatccaggtgtaattggtgaccgcggaccccccgggccatccaga atcctaaacacggggttcctgttggtgatgcacagccagtcaaagacggttccctcctgt ccatcaagtatggcaactctgtgggttggatacagcctgctgtacctggagggtcaggag aaggcccacactcaggacctgggtcaggccgggtcgtgcatgcgggtcttttccaccatg cctttctcctcctgcaatatgggaacttgttcttacgccagccgcaacgataaatcctac tggctgtcgaccacggcggcggttcccagtataccagtgggaggagcctccatcaaggaa cacatcagtcgctgcgtggtatgtgaagccccctccgcccccgtcgctctgcacagccag acctccacccaaccaaactgcccccccaactggaggagcctgtggaccggatactccttc ctgatgcatacaggtgcaggtgatgagggtggtggacagtctctgacatcatcaggaagc tgcctgacagacttcagggcccagccctttgtggagtgccaggggcctcgaggcacctgc cactactttgccaacatctacagcttctggctgaccacagtggacggcacggcctcgtcc tccgacatgtcgtccagcacgctgacggagggccagcagcagaggaggaacatcgggagg tgtaacgtctgcatgagggagtga

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