Scomber japonicus (chub mackerel): 128360096
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Entry
128360096 CDS
T09718
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03440
Homologous recombination
sjo04068
FoxO signaling pathway
sjo04110
Cell cycle
sjo04115
p53 signaling pathway
sjo04210
Apoptosis
sjo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128360096 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128360096 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128360096 (atm)
04210 Apoptosis
128360096 (atm)
04115 p53 signaling pathway
128360096 (atm)
04218 Cellular senescence
128360096 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128360096 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128360096 (atm)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128360096 (atm)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128360096 (atm)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128360096 (atm)
Protein kinases [BR:
sjo01001
]
Serine/threonine kinases: Other
PIKK family [OT]
128360096 (atm)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128360096 (atm)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
128360096 (atm)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
Check point factors
Other check point factors
128360096 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT_ATR
Ist1
Motif
Other DBs
NCBI-GeneID:
128360096
NCBI-ProteinID:
XP_053176399
LinkDB
All DBs
Position
6:14337837..14362698
Genome browser
AA seq
3090 aa
AA seq
DB search
MSLALHDLLVCCKGLESDKVTERKKEAENFRRLLRNPEVVQELDRTSVPKAKGSKQLTWD
AVFRFLQRYVQKETENIKSSKSNVTSTTLALREKKMAEMCSLIRYFISYANKRGPRLKCS
ELLRHVMEVLQNPFSCSAYGENYSSLLVKDIFSVRKYWCDITPEQWHSLLNLYCGLFSSS
CKSINRVLVSRVIYTVVQGCCMQSDGFNNTLFSFFSKALLNTRQEKHLSVLEHLVSALNI
FFRFAAMNCRMKVCQLGEELLPSLLYVWADMRPSAALKEEIVKFFNLQICVHHPKGAKTQ
DTGAHAEDWTKWRSLLYNLYDALVREISHIGSRGKYVTGTRHIAVKDNLIELTADICHQL
FSDVNDIQILEVTQASLRVTQMGSPTHGTPNKRRRIELGWEVLRDHLQCQQSDFDIIPWL
QITAVLISKYPSMVPGRELVPLLSVLYQLLAEQRRGERGPYVLRCMREVARCQACYPERV
QVHKAELDRLWRRVWALSLRGVSSPQMEALSLDLLASIVQGGLINMDREFWKLFSGSACK
PSQSAALCLAQALLKCLVPKSLISSSGWDSTGITDGSGSFNLKETLIGWLLMTDQSDEME
DSSRPHPIICRDFPHNLIANILVSLTLKDTRAGLKFLLSADGIESAFFQEQVSLSARDNL
EEIERLYLQFSFNTLPSDIQGSDETVKGTPTDGQFTAVPSLKNKLEQSVLCVADNLLNCY
SPDSQSTPPECLVRCFSLLTGVLAGYVSTGFLTEEEACHSQLFTKAKAVAQDFSGFVSSV
KVKMTEEGTMTTLRSVMKLCTLSATRRNEDDFSSSLFRMILPASLLSDMAEICKLLLNSV
SKRVNVVDEDDHMDDDWNMTRTQQRDDIDLFEDGEESHSSTNGNHRQKGENTDAACRPGA
KSLLADDHLAHQDLAFLAMLEFLCECGSVQPVPGQLLKPQEVRHRLLLLVKQIDFSKALH
LNMYLILLKKLPVEDTLSPEEFDSLLRPLADLCSLYRQDQEICAAVLLGLLPSIRSLGRT
QHTPDEMRHVQGSLLQVVSGFCILSQSGKCMATVRAALVQCLVALLEADPCCKWAVLSFR
GADREEERPVSIFLPSHLADAHHQVRMLVAMSAERLFLEMKHEDPDRSKMLPLKHQQAAF
ENIYLKAQEGMKLPKSSSSDDQQDEIFNRQATLLKSLSIVLCCSPVCEKQSLFALFQSYK
ENNIEEQLIKKMLCSVSRVLGYRSVKTFVSSHLYYLIAEWLSQRQSDDRYTLGSFPYTLL
DHDTVKDFYNSSYQVLIPHLVFLDDFEQVKSIGRCLEKDWKELLADCFPKIMVNILPYFA
LSGQDAQVAEQRENAHKVYDLLKDANCLGKQRIDSLIHSNLADIVVELLMTLYEGSGGEG
DRENLKCFIGELDPVPNPPYFNSYVIKATLDYLSKCHSANHKSLVAILSKTPISIQKILL
AVCERADETTNSYERHRILLMYHLFVNLLLREVRDGLGGAWAFVLRDIIYTLIHHINSRP
AQCDEVSTRSLSLCCDLLTSVCRAALQFCDDALDCHLQVIVGTLTAQVTRRPAISQQVLS
LLMYLVIENQQKLKEAIRRLEPFPNLPEFRELRSVQHMLKYDNGTFTLRQEISHFLSVTS
CDSLPLTRLEGLKELTRQLHDNKGQIRGLLKECHADPSDSVLVKLVLSLLQLCKLAANHP
GGADILEAAGSCLGELGPVDFSTIALLHGRDPLYEKAVSLFTSTESQCVYIILNCMNDAL
TQQRIEVRQAAAQCVKNILTTQSGIDFWEQHKDNRDPMLTYLNPFRKAKKKVAKVTAEES
SEAKEKLGSQEFWIPQAGGHNVWLKALCTALLDSGGVRSEALLLSRPLCLVRVDCCQRLL
PLIIHSILLDDSDGSWRELLSSHIQDFFSFCCRSAQASSRSATPFNSDSESDTASQGLYD
KASLRTMLAVIDYLRHQQRPLESASTSCGTVCHSNFWLELNYLEVAKAAQSCSAHFTALL
YTEIYVDKIKANMEESRRTKSRVTRKINFEENSQNLTISSLIERSMEETNISLQELLIEV
YRSIGEPDSLYGCGGETMTSPLTRIRTYEHEAMWGKALTSYDLHSTLPDVTRQVGIVEGL
QNFGLSSILTTYLKGLESEGVEWGAELRELRFQAAWRNTQWDCDLSERSEKSKPGFHESV
FCGLQALRDKEFSILEETLKQARGAEVEELCKGSLEAVSSLYPALRNLQSIRELESVKQL
FSRRFSDVALRDVCSQWRQHSQLLTDSDFALVEPILAVRSVAQNTLMSRVGDPDSNQYLT
SVVTEHLMELCQLARKAGNTQLAERAVFQMTQHGGGGPRASSPVLSWQLEEAQVFWAKGE
QGLALGRLRKMINNLEEKVDFNPALAPLYTECLRLCGNWLAETCLESPGVILEKYLERAV
EVIEGESGVQDSRLQSQRTEAFLSLARFSDAQYQSIDKYMNSSEFENKQALLEKAKEEVD
LMKERKVTSNRYTIKVQRELELDEKALSNLQADRQRFLCKAVENYIQCLEQGEEHDTWVF
RLASLWLENADVKAINDMMKKGVKKIPSYKFLPLMYQLAARMGTKIATGVTEDVGFHNVL
NDLICRASLEHPHHTLFIIFALVNANKDENFCRSRLSKSAPRQPSQFDLERSDVARKIIT
AIRKKRGQMIRGIELLCDAYITLAYMDASRHKTEKKAIPIPADQPIMQIKDMDEVAIPTM
EIKVDPTGRYDNLVTVRSFLPHYHLAGGVNLPKIIDCVGSDGKSRRQLVKGQDDLRQDAV
MQQVFNMCSMLLQRKMDTRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDPNKGA
HKRFRPQDWTNLSCRKKMMEAQRLAFDEKLQVYSEVCTNFRPVFRYFCMERFLDPAVWME
KRLAYTRSVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVP
FRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKA
FYLQHDEQQELNATLSSTMGGDDLDNHRKSSDSQSFNKVAERVLLRLQEKLKGVEEGTVL
SEGGQVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq
9273 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagctcttcatgatctgctggtctgctgcaagggcctggagagtgacaaagtc
acagagaggaagaaagaagctgaaaacttcagacggctccttcgaaatccagaggttgtg
caggagttagatcgcacctcagtacctaaagccaaaggctccaaacaactcacttgggat
gctgttttcaggtttctgcagcgttatgtccagaaagagacggaaaacatcaaatcaagt
aaatccaatgtcacatcgacgacactggccctacgggaaaagaagatggctgaaatgtgc
agtttgattagatatttcatcagctatgcaaacaaacgtgggcctcgtctgaagtgcagt
gagctgctcagacatgtgatggaggtgttgcagaatccattcagctgttcagcctatgga
gaaaactatagcagcctcctagtgaaggacatcttctctgtccgcaagtactggtgtgac
atcactccagagcagtggcacagtcttttgaacttgtactgtggcctgttcagctcttca
tgtaaatccatcaaccgcgtcttggtgagcagagtcatctacacagtggtgcagggctgc
tgcatgcagagtgatggattcaacaacaccctgttcagcttcttctccaaagcattgctt
aacaccaggcaggagaaacacttgtctgttttggagcaccttgtctcggctctcaacatc
ttcttcagatttgcggccatgaactgtcggatgaaagtgtgtcaactgggagaagagctt
ctgccttccttactgtatgtctgggcggatatgaggcccagtgctgccctcaaagaggag
attgtgaagttcttcaacctacagatttgtgtccaccaccctaaaggagccaagacccag
gacacaggagctcatgctgaggactggacaaagtggcggagtttgctgtacaacctgtac
gatgctttggttcgagaaatcagccatataggcagcagagggaagtacgttacaggcaca
agacacatagctgtcaaagacaatctcatcgagctcacagctgacatctgtcaccagctg
ttcagtgatgtcaacgacatccagatcttggaggtgacgcaggcttccctcagagtcacc
cagatgggcagtcccacccatggaacacccaacaagcgacggcgcatcgaactgggttgg
gaggtcctccgggaccatctgcagtgtcagcagagtgactttgatatcataccatggctg
cagatcactgcagttctcatctctaagtacccctctatggtgcccggccgggagctggtt
ccgctactgtcagtgttgtaccagctcctagcagagcagcgaagaggagagagagggccc
tatgtcctgcgctgtatgagggaggtggcccgatgccaggcctgctacccagagagggtc
caggtccacaaggcagagctggacaggctgtggcgtcgagtgtgggccctgtcgctgcga
ggcgtcagttcaccccagatggaggccctcagtctggacctgctggcctccattgtccaa
ggcggactgatcaatatggacagagagttctggaaactcttctctggatcagcatgcaaa
ccatcccagagtgctgcactctgtctagcccaggccctgctgaagtgtttggtccctaag
agtctcatctcgagctcaggctgggactctacggggatcactgatggatctgggtcattc
aacctgaaggagaccctcataggctggcttctaatgacagatcagagtgacgagatggag
gatagctcccgacctcaccccatcatctgcagagactttcctcacaatcttatagcaaac
atcctggtatccctgactttgaaagacacaagagctggcctgaagttcctgctgagtgct
gatggaattgagagtgccttttttcaagaacaagtatcgctcagtgccagagacaacctg
gaggagattgagaggctgtacttgcagttcagcttcaacacgctgccctcagatatccaa
gggagtgacgagacggtgaaggggacaccaactgatggccagttcactgctgtccccagc
ctcaaaaacaagttggagcagtcggtgctttgtgtggctgacaacctgctcaactgctac
tcacctgattctcagtccacccctccagagtgtctggtgcgctgtttcagtctgctgact
ggtgttctagcaggttatgtctccactggttttcttactgaggaggaagcctgccactca
cagctcttcactaaagctaaggctgtggcccaggacttcagcggctttgtctctagtgtg
aaagtgaagatgacagaagaagggaccatgaccacgctgagatctgtcatgaagctctgc
acactgtccgccacaagaagaaacgaggatgatttctcctctagtctgttcagaatgatt
ctgccagccagtctcctcagtgacatggcagagatctgcaaactcttgctcaacagtgtt
tctaagagagttaatgttgtggatgaagatgatcatatggatgatgactggaacatgacc
agaactcaacaaagggacgacattgacctgtttgaagatggtgaagagtctcatagcagc
accaatgggaaccacagacagaagggagaaaacactgatgctgcctgtaggccaggtgca
aaaagcctgttagcagatgatcacctggcccaccaggacctggctttccttgcgatgctg
gagttcctgtgtgagtgcggctctgtccagcccgtccccggccaacttctcaaaccgcag
gaagtgcggcaccggctgctgctgctggtaaagcagatcgacttcagcaaagccctgcac
ctcaacatgtatctcatcctgttgaagaagcttcctgttgaggacactctctctccagag
gagtttgactcgttacttcgtcctctggcggacctgtgttctttgtaccgtcaggaccaa
gagatctgcgctgctgtgcttctgggtttattgccctccatcaggagtttagggaggacc
caacacaccccagacgagatgagacatgtgcaagggtccctgctacaagtggtgtctggg
ttctgtatcctgagtcagtcgggaaaatgcatggcaactgtgcgagctgctttagtgcag
tgtctggtggccttgctggaggctgacccttgttgcaagtgggcagtcctgagtttcaga
ggtgctgacagagaggaggagcgtccagtgtccatcttccttccatctcaccttgcagat
gctcatcaccaagtccgcatgcttgtagccatgtcagcagagaggttgttccttgagatg
aaacatgaggatccagataggagtaagatgttgccattaaaacaccagcaggcagcgttt
gagaacatttacctgaaagctcaggagggaatgaagctcccaaaaagcagctcctctgat
gaccagcaggatgaaatcttcaaccgccaggccacgcttctgaagagtctgtctattgtg
ctgtgttgtagtccagtctgtgaaaaacagtctctgtttgccctcttccagtcctacaag
gaaaacaatatagaggaacagcttattaaaaagatgttgtgcagtgtgtccagagtgctg
ggttacaggagtgtgaaaacatttgtcagctctcacctgtactacttgatagctgagtgg
ctctcacagagacagtctgatgaccgctacactcttggatctttcccctacacactccta
gaccatgacactgtcaaagatttctataactcctcttaccaggtactgatcccccacctg
gtcttcctggatgactttgagcaggtgaagtctatcggcaggtgtcttgagaaggactgg
aaagagctgctggccgactgcttccccaagattatggtcaacatcctgccatattttgcc
ttgtctggacaggatgcacaagtggcagagcagagagagaatgcccacaaggtgtacgac
ctgctcaaggatgccaactgtctgggcaaacagcgaattgacagcctgatccacagtaac
ctggcggacatagtggtagaactgctgatgactctgtatgaaggaagtggaggtgaagga
gacagagagaacctgaaatgctttataggggaactggaccctgtaccaaacccaccatac
ttcaactcctatgtcatcaaagctacactggactacctcagcaaatgccacagtgccaac
cacaaatcactggtggccattctatcaaaaactccgatatctattcagaagattctgcta
gcagtgtgtgaaagggcagatgagacgaccaacagctatgaacgccaccgcatcctcctg
atgtatcacctttttgtcaacctgctgctccgtgaggtgagggacggtctaggaggagcc
tgggcctttgtcctcagggacatcatctacacactcatccaccatatcaacagcagacca
gctcagtgtgatgaggtctctacacgaagcttgtctttgtgctgtgacctgctgacctcc
gtgtgtcgggcagcactgcagttctgcgatgacgctctggactgtcacctacaggtcatt
gttgggactctcacagctcaggtgacgagacggcccgctatctcacagcaggtgctcagt
ctgttgatgtatctcgtgatagagaatcagcagaagttgaaggaagccatccgccggttg
gagccttttcctaacctccctgaattcagagagctgcggtctgtacaacacatgctcaaa
tatgacaatgggacgtttacactcagacaggagatatcccacttcctgtcagtgacatcc
tgtgactccttacctctgaccagactcgagggtctaaaggagctgaccaggcagctgcat
gacaacaagggacagatcagagggctgctcaaagagtgccatgctgacccttcggacagt
gtgcttgtgaagctggttctcagcctgctgcagctctgtaaactggcagccaaccaccca
ggaggagctgatattctagaggcagcaggaagttgcttaggagaactgggtccagtagat
ttctccaccatcgccctgcttcacggcagagaccccctctacgagaaggctgtgtctctc
ttcacctccactgagtcacagtgtgtttacatcatcctcaactgcatgaacgacgcgctc
actcagcagcgtattgaggtgaggcaggcagcagctcagtgtgtgaagaacatcctcacc
actcagtcagggattgacttctgggagcaacacaaagacaacagagaccccatgctgacc
tacctcaacccctttagaaaggccaagaagaaggttgcaaaggtgactgccgaggagagt
tcggaggccaaggagaagctggggagccaggagttttggattcctcaggccggcggccac
aatgtctggctgaaggctctgtgcaccgcactgctggacagcggaggagtcaggagtgag
gctctgctgctgtcacgaccactgtgtctggtgagagtggactgctgtcagaggttgctg
cccctcatcatccactccatcctgctggacgactcagatggctcgtggagagaattgctc
tcctctcacatccaggacttcttcagtttttgttgcagaagcgctcaggcctccagccgc
tccgcaacacccttcaactctgactctgagtcagatactgccagccaaggcttgtatgac
aaggcctcactgcgcactatgctggcagttattgactatctgagacaccaacagagaccg
ctggagtctgctagcacctcctgtggtacagtgtgtcactcaaacttctggctggagctg
aactatctggaggtggctaaagctgctcaatcctgctcagctcacttcaccgctcttctc
tacactgagatctatgtcgacaaaatcaaagctaacatggaggaaagtcgcaggaccaag
tccagagtgactcgcaagatcaattttgaggagaacagccagaacctcaccatctccagc
ctaattgagaggagcatggaagagaccaatatcagtctgcaggagctgctgattgaagtc
tatcggagcattggagagcctgatagtctttatggctgtggaggagagacgatgaccagt
ccactgacaagaattcggacttatgagcatgaggccatgtgggggaaagctctaacctca
tacgaccttcactccactctgccggacgtcactcgacaagtgggaattgtggagggccta
cagaactttggtctgagcagcatcctcactacctatctgaaaggtctggagagtgaaggg
gtagagtggggagctgagctgagagagctccgcttccaggctgcctggaggaacacccag
tgggactgcgacctgtcagagaggagtgaaaaatccaaacccggcttccatgaatcagtg
ttttgtggtctgcaagcgttaagggacaaagaattctccatacttgaagaaactctgaaa
caggccaggggtgcagaagtggaggagctgtgcaaaggcagtctagaggccgtgtcttct
ctgtacccagccctcaggaacctgcagagcatcagggagctggagagtgtcaaacagctc
ttctctagacgcttctctgatgttgctctgagggatgtttgcagccagtggcggcagcat
tcccagctgctcactgacagcgactttgcattggtggagcccattctggctgttcgctct
gttgctcagaacacactgatgtccagggtgggagaccccgacagcaatcagtatctcacc
tctgtggtcactgaacacctgatggagctctgccagctggctcgtaaggcggggaacaca
cagctggcagagcgggcagtgtttcagatgacgcagcatggcggtggagggccacgggca
tcatcacctgtgttgtcatggcaactggaggaggctcaggtgttctgggcaaagggagag
cagggactggctctgggtcggctgagaaagatgataaacaaccttgaggaaaaggtggat
ttcaatcctgctctggccccattatacactgagtgcctcagactgtgtggcaactggctg
gctgagacctgcctggaaagtcctggagtcatacttgagaagtacctggagagggcagtg
gaggtgattgagggcgagtcgggtgtgcaggactcaaggctgcagagtcagcggaccgag
gccttcctgtcgctggcccgcttctcagatgcacagtaccagagcatcgacaaatatatg
aactcctctgagtttgagaacaagcaggccttgcttgagaaggccaaagaggaagtggac
ttgatgaaggaacgtaaagtaacatccaacaggtacacaataaaggtgcagagagagctg
gagctggatgagaaggccttgtccaacctgcaggcagacagacagcgcttcttgtgtaag
gcggtggagaattacatccagtgtctggagcaaggcgaggagcacgacacctgggtgttc
cgcctggcttcgctctggctggaaaatgctgatgtgaaggccatcaatgacatgatgaag
aaaggagtgaagaagatcccctcctataagtttctacctctcatgtatcagctggctgct
cgcatgggaaccaagatagcaactggtgtcacagaggatgtgggattccataacgtcctc
aatgacctgatctgccgggcgtctctcgagcacccccatcacacactcttcatcatcttc
gccttggtgaacgccaacaaagacgagaacttttgcaggagccgcctgtcaaagagcgct
ccacggcagccgtcacaatttgacctggagcgttcggatgtggcccggaagatcattact
gcaatcaggaaaaagagaggccagatgatacgaggtatcgagcttctctgtgacgcttac
atcactctggcttatatggacgccagcaggcacaagactgagaagaaggctattcctatc
cctgctgatcagcctatcatgcagatcaaggacatggacgaggttgccatccccacaatg
gaaatcaaggttgatccaactggtcgctatgacaacttggtgacagtcagatctttcttg
ccccactatcacctggccggaggagtcaacctgcccaagatcatcgactgtgttggctct
gacggcaagagcaggagacagctggtcaagggccaggacgacctgcggcaggatgcagtg
atgcagcaggtcttcaacatgtgctccatgctgctacagcgcaaaatggacactcgcaag
aggaagctcaacatcagacgatacaaggtggtgcccttctcacagcgtagtggcgtgtta
gagtggtgctccggcacggtgcccattggagagtttctggtggatcccaataaaggagct
cacaaacgcttccgacctcaagactggaccaacctgtcctgccgcaagaagatgatggag
gcacagaggcttgcgtttgatgagaagcttcaggtctacagcgaggtgtgcacgaacttc
aggccggtattcagatatttttgcatggagcggttcctggaccccgcagtatggatggag
aaacggctcgcttacacccgcagtgtggccacctcatctatagttggctacatcgtgggc
ctcggtgacagacacatccagaacatcctgattgatgagcagactgctgaactggtgcac
attgatttaggtgtagcctttgagcaggggaagatcctccccaccccagagaccgtcccc
ttcaggctgtccagagacatcgtggacgggatgggcatcactggagtggagggagttttt
aggagatgttgtgagaagactatggaagtgatgaggagctctcaagaagctctgctgact
attgtagaggtgctgctgtacgaccccttgtttgactggaccatgaaccctctgaaggcc
ttctacctgcagcatgacgagcagcaggagttaaatgcaacgctcagctccacgatgggc
ggagatgatttagacaaccaccgtaaatccagtgacagtcagagcttcaacaaagtggca
gagcgggtgttgctgcggttgcaggagaagctgaagggggtggaggagggcacggtgctc
agcgagggggggcaagtcaacctgctcatccaacaggccatggaccctaaaaacctcagc
agactgttcccgggctggcaggcctgggtgtag
DBGET
integrated database retrieval system
