Scomber japonicus (chub mackerel): 128360113 Help Entry 128360113         CDS       T09718                                  Name (RefSeq) protocadherin-16-like   KO K16507   protocadherin-16/23 Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:sjo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     128360113  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sjo04515]     128360113 Cell adhesion molecules [BR:sjo04515]  Cadherins   Cadherin related    128360113 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Ig_CLSTN Ig_Cad99C_N Cadherin_CELSR2_9th Cadherin_2 Fibulin_C RET_CLD1 Ig_BT4661_3rd CADH_Y-type_LIR TED6 Motif Other DBs NCBI-GeneID:  128360113 NCBI-ProteinID:  XP_053176418 LinkDB All DBs Position 6:21012701..21086408 Genome browser AA seq 3280 aa AA seqDB search MKTAAKGLGKSVMNPLHREGWWSRRIVLMVYVALELVTIHSPVVLGTLDLQLDEEQPAGT IVGDISAGLPTGEKASMYFISDHEGTGVGSDLDIDESTGIIKTAKVLDRELRDRYNFIAV TMRGVTVEVTITVNDINDHTPAFPRKQATFKIPEQTAIGTRFPLEPAVDADKGQFTTQGY LIKDGNVGQAFTLETRRGSNEVLYLDLVVNAILDREKRSTYTLSLEAFDGGSPKRTDQMT LDIAVQDINDNAPFFNQSRYHAIISENLQPGSNILQVFATDADEGDNGMVLYEINRRQSD PDRYFVIDTRTGIITLNKPLDFEMRRVHELVVQAQDNATQPEVTNAFVTIHVRDYNDNQP TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFGLTTKDNI IYLICVDRILDREERDTYELRVMATDSGTPPLRAESSFIIQVTDVNDNPPLFDQPVYRQV IPEVVFPGSFVLQVTARDKDQGPNGDINYSILKDKGAFSNWFSIDSVTGIITTLSQLDYE KNPNPSITVLATDSGKPPLSSTAVVKIILQDINDNEPVFERNFYNMSIKENTAPGTCILE VTATDADGGSFGSITYSLGSGINSAVPSQFTIGKETGQICTSTVLDRDQGLASYDFTVTA VDGGGLSSVTYVKVDLVDINDNRPAFYPVSYAVSLSTQSAPGTSVVRVTAYDPDSDENGR ITYKTIPGGASPYFTLNKDTGVISLSRSVYGKANSVIPMVISAQDGGGLVALVNARVNIS VVAGLVAPPVFEQNQYYFTVLEDVLQGTVIGIVQASIKTDTSKDISYTISSGDPAGYFTV DPDTGALRTSLSLDHEAQSALDLEVQARSGNPPAFGQTRVHITIADVNDNPPVFLPSSSE SLLLPEHTEMGTVVYRVQAEDKDSGANGQLTFDLSAPSGIQRIFSIERSTGEIRLVGSLN YESAPRYDIQVIAKDSGVPQFSATFMLVVHVQAENDQGPVFDTLTYRVELKEGTPINTRF LQVRALNRETPGIGHFSPLAYHLRPDGDAAGFGIAADSGWLFVKSALDREVKDMYLLTVL ASAGHGQWKKTGSATVRISVTDENDNSPRLPQERVFMAVRENLPVGTGFGHVSATDRDSG PNGRLSYRLLHPDRNFQINSHTGEISTRTTLDREQQSSYQLVVVVQDGGSPPRSATGTAF VTVLDDNDNDPSILTQSGKNLIIKVSEGQSSGVLLGTLQAKDPDEGENGTIFYSLSGPRA ERFSLNPNTGELRSSSPLSHSERAEYTLTVTATDRGLPPRSTSCSLTIQVLSINRPASKT NSLSISFNSVEEAKPGSVIGSVRLHDRETPEEGKVTYTVVGDTDRDGTFVVDRQTGDVYL ARPLDYERDMRYTLKIEVDDLSQDPPSSTLVHLDIDVEDSNDHAPQFPEDPITIVISESM QPSSSVYTFQATDKDGSGPNSELRYSILHQWPNTPSLLTLDPSTGVLSLAQELDHEVTSN LILVVKATDSALDASQRRWGSVTARVYVTDENDNPPVFSSPTAVSVMEDQPVGFVALYVM ARDADQGENGRVTYTIQSGNTGGTFSLNPNTGSLSIFKPLDREEQDVFNLTIIAEDHGIP QQSSSQLLCVHVIDVNDEVPWFEESQYEAQISENQPSGTSVLTVSASDLDQGTNGQVTYG GISEEGFSINPVTGVITNTKSLDRELQEYYTVTVFAKDGGLPPNYAKATVKIRVLDENDN APVFGRLYYSIEVPENLEAVLLFTLRATDQDAGDSGEMNYRITAGDPSGDFHLDGQSGAL STSRPLDREKKAVYTLIVTAQDQGQPSLSGTATVEVTILDINDHSPEFQSSTYTADVSED VPIGSLVLEVKAIDLDHGPNSQVQYFLSHGSQSMFIIDQNTGRIITAAPLDRERVASYTF EVYATDSSPANPRNSTAHVTVYIQDVNDNAPFFILDPFIVNISASSVSSRRVLATMRAED KDFGANGSVFYRFANPVRGFTINSLTGDIQATEKLQTLTQSQRTLIVQAMDQGNPAQSSL GVVIIYIREQTYRGIRFSRTARDVSLQENAAKGTVVTQTQAQYPDGSQTGISYSLFSGNR MQSFGINTITGEIWVQKSEGLDFEETPKLRLVVKAETASSSSYMAVNLILQDVNDNLPRF QLQNYVAYIREAQGYDFPIIQVAADDLDQGQNGQVTYSIRSSSMSGLFKIDPLTGSITTA AIMDREIWPQTKLVVTATDRGTPRLAGSATLTVIIIDLNDNSPTIPLPREIRVPEDTLIG TVITQVTGNDVDSGPALSYTLHLDRNTEGMFGIHRYGGGVSLTGPLDYEERTWYTLTIRS SDSKHQSEANLTVLVDDVNDNAPTFTQDFYQVTASEHLPAGSAVITVTATDRDTGENGKI TYRVMSSTRGVFYIDPSNGTLFVNQKTVFDFENPSILVVIEAVDHGTPSLSSIATVQVQV SDVNDNAPIFHQSEYRATVSEDGLPGSTVLTLEAVDGDLSRDNCGFDFAIASGNSGNAFQ IESSVHFLEGRGFQTVGSLILVEELDFEAMPSYNLTVVVSDRGIPQRSSSVPILISVTDA NDNPPVFSRAEYSVVLSEGTAAGTEILHLSATDPDSAPNGEVQYSISSGDETDLFQVDRW TGALKLQQPLDSERQLSHMIVVQATDGQGHYALVPVSIEVKDINDNRPFFPLKLVTASIK ENQPQNALVTMLHAIDHDKGVFGQLKYYMLDNSKDGREAFLINQSSGEIRTRSTFDFEKA NSFHFMAVAIDAGNYSATVTVEVYVTGEDEYDPVFTSSEFSFEVPEGAKKGQIIGKVQAK DEDEGVDGIVLYSLADSSPYFEVNKSTGEISLKMDSYSRHVGRAKREVRLMTLDVTAHSP LETSRMAMAKVTVDVTHTFFGLTTDMNMMLVSVIAVSLGTIVILIIIAVALCFVKLRRQK KHQKAQRRTPASGTMLHKIEETKIAANEIIYHQTLPGYAADQSTSGGPYTRGGSLDPSHS SGRGSAEAEAAEDDEIRMINEYPRVSSISSSMQERISARGPDSGIQQDADQLSDVSCEPS IDWFKGKKLGSLNETILAGQVPVYRDEGGGYVGVGRGLSISHPKDYTFPEDGKPAVDGSL TAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDETAPPNPRRSFHHKAKAES RIDPPPLITSVAHPGAKTVPPKPAVGRTFPHLASLRRSPISGEGSISSVAMSPSFSPSLS PLAARSPAITPFSVSQGPSASMISTTEHHLEHSEEAELRI NT seq 9843 nt NT seq  +upstreamnt  +downstreamnt atgaagacagctgccaagggtttggggaagtctgtaatgaaccctttgcaccgtgagggt tggtggagcagaaggatagtgctgatggtgtatgtcgccttggagcttgtaacaatccat tcacctgtggtcctagggacccttgacctacagcttgatgaggaacaaccagcaggcaca attgtaggtgatatcagtgcaggacttcctactggcgaaaaagcctctatgtacttcatc tccgaccatgaaggcacgggtgtaggcagtgatttggacatagatgagagcactggcatc attaaaactgcaaaggttctggacagagaattgagggacagatacaacttcattgcagtc accatgagaggtgtgacagtagaggtgaccatcacagtgaatgacataaatgaccatacc ccagcgttcccaagaaaacaggctacctttaaaattcctgaacagacagccatcggcacc aggtttcctcttgagccagctgttgatgctgataaaggccagttcaccactcagggttac cttatcaaggatggaaacgttggtcaggcattcaccttggagaccagaaggggaagcaat gaggtcctctatctggacctggtggtcaatgccatcctggacagagagaaaagatccacc tacacactatctttggaggcctttgatggtggttcccctaaaaggactgatcagatgaca ttggatattgctgtacaagacattaatgacaacgctccttttttcaaccagagccgctac catgccataatatctgagaacctacaaccaggaagcaacatcctgcaggtgtttgccaca gatgctgatgaaggagacaatgggatggtgctgtatgagatcaacagaagacagagtgac ccagatcgttactttgtcattgacacccgcactggcatcatcaccctcaataagccactg gactttgagatgaggagagtccatgagctggtggtccaagcacaagacaatgcaacccag ccagaggtgactaatgcctttgtcaccattcatgtcagagactacaatgacaaccagcct acaatgactatcatcttcctcagtgaggatgggtctcctcgaatctcagagggtgcacag ccaggccagtatgtagccaggatctcagtcacagacccagactatggagagtatgccaac gttaatgtgtcacttgagggaggagatggaaagtttggcctgacgacgaaagataatatc atctatctgatctgtgtggacaggattctggatcgcgaggagagagacacatatgagttg agggtgatggcaacagactcaggcacgccacctctcagggctgagtcctccttcatcatc caggtgactgatgtaaatgacaaccctcctctgtttgatcaaccagtttatagacaggtt atccctgaagtggtgtttccagggagctttgtgttacaagtgacagctagagacaaagac cagggccccaatggggacattaactacagcatcctgaaagacaaaggtgctttctccaac tggttcagcatagactctgttacggggattatcactactctctcccagctggattatgaa aagaaccccaatcccagtataactgtgttggcgacagatagtggaaaaccacctctgtcc tctactgcagtggtcaaaatcatacttcaggatataaatgacaatgagcctgtttttgag aggaacttctacaatatgtccatcaaggaaaacacagctccaggaacttgcattcttgag gtcactgcgacagatgcggacggtggctcttttggctccattacctactccctgggctct ggcattaacagcgctgttccctctcagttcaccattggcaaggagactggacagatttgc actagtactgtactagacagagatcaagggctggccagctacgacttcactgttactgca gtggatgggggtggactgagctcagtaacctatgtgaaggtggatctggtcgacattaat gataacagacctgctttttacccagtgagctatgctgtcagtttgagcacgcagagcgcg cctgggacgtctgttgtcagagtgacggcctatgacccagactcagacgagaatggcaga ataacatacaaaactatacccggaggggcctccccttacttcactctcaacaaagacact ggtgtcatttccctgtctcgctctgtgtacgggaaggccaactctgtcatacccatggtg atctctgctcaggatggtggaggtctggttgctcttgttaatgccagggtgaacattagt gtggtggcaggtttggtagcaccaccagtgtttgaacagaatcagtactacttcactgtt ttagaggacgtcctgcaggggacagtcataggcatcgtccaggccagcattaagacagac acctctaaagatatctcctacaccatcagttctggggaccctgcaggatactttacagtg gatcctgacactggggccctgaggaccagtctgtctttggatcatgaagcccagtcagct cttgatttggaggtgcaggcccgcagtggcaacccccctgcctttggccaaacccgtgtg cacatcaccatcgcagacgtcaatgataatccgcctgttttcctgccctcatcctcggag tccctgctgctgccagagcatacagaaatgggtactgttgtgtatcgtgttcaagctgag gacaaagactctggagccaatggacaactcacctttgacctgtctgcaccaagtgggata cagaggatctttagcatagagcgcagcactggagagatacgattggtgggcagcctcaac tatgagagtgcaccccgttacgatatccaagtcattgccaaggatagtggagtgccccag tttagcgccaccttcatgcttgtggttcatgtccaggcagagaatgaccagggacctgtg ttcgataccctcacctaccgtgtagaactaaaagaaggcactccaataaatacacgcttc ctgcaagtcagggctctgaacagagaaacacctggcataggtcacttcagtcccctggcg tatcacctgcgtcctgatggagatgctgctgggtttggcattgctgcagacagtggctgg ctgtttgtgaaaagtgccctagacagagaagtcaaggacatgtatcttcttacagtactg gccagtgctggtcatggacagtggaagaagacgggcagtgccacagtgcggatatctgtg actgatgagaatgacaactctcctcggctcccacaggagagggtcttcatggctgtgaga gaaaacctgccagtgggtacaggcttcggtcatgtgtcagccacagaccgagacagtggt cccaacggacgcctcagctaccgcttgctgcatcctgaccgcaatttccagataaactcc cacacaggtgagatcagtacaaggacaactctggatagagagcagcagtctagttaccag ctggtggttgtggtacaagacggaggttcgccccctcgcagcgctacaggcacagccttt gttactgtcctggatgacaacgacaatgacccttctatccttacccagtcgggaaaaaac ttaatcataaaggtgtcagaaggacagtcctctggggttctactgggcacactgcaagcc aaagatcctgacgaaggagagaacggcaccatattctactcattgtcaggtcccagggct gagcgtttctctctgaacccaaacactggtgagctgcgttcatcatcccccctcagccat tcggaacgagccgagtacaccttgacagtgacagccactgacagaggactgcccccacgc agcacctcctgctccctcaccattcaggttctcagcattaacagacctgcttcgaagacc aattcactctctatatctttcaactctgtggaggaggccaagcctggctctgtcattggc tctgtccgcctccatgacagagaaactccagaggaggggaaagtgacctacacagtggtg ggggatacagacagagatgggacctttgttgtagatcgccagacaggagatgtgtatctg gctcgtcctcttgactatgaacgagacatgcgctacaccctgaagattgaggtagatgac ttgtcccaggaccctcctagcagcaccctggtccacctagatattgatgtagaggacagc aatgaccatgcccctcagttccctgaggaccccattactatcgtcatctctgagagcatg cagcccagctcctctgtctatactttccaggccacagacaaggatggcagcgggcccaat agcgagctgaggtactccattctccaccagtggccaaacacgcccagtctactaaccctc gacccctccactggggttctatccttggcccaggaattggaccatgaagtcacctccaac ttgattcttgttgtaaaggcaacagactctgctcttgatgccagccagaggcgctggggc tcagttacagcgagggtctatgtaaccgatgagaacgacaatccaccagtgttcagctcg ccaacagctgtcagtgtgatggaggaccagccggtaggctttgtggcactgtatgttatg gccagagatgcagaccaaggggagaatggccgggtgacctacaccatccagtcaggcaac acagggggaacattcagcctcaacccgaacacgggctctctgtctatcttcaaacctctg gaccgtgaggagcaggacgtctttaacctcacaataatcgcagaggatcatgggataccc cagcaatcatccagccagctgctgtgtgtccacgtgattgatgttaatgatgaggtgccc tggtttgaggagagccagtacgaagctcagatctcagagaaccagccttcaggaactagt gtgctaacagtgtctgcttctgacctggaccaaggaaccaatgggcaggtgacatatgga ggtatctcagaggaaggcttcagcatcaacccagtgacaggtgttataaccaacactaag tcactggacagggagcttcaggaatactacactgtgacagtttttgcaaaagatggaggc cttccccccaactatgccaaagccactgtgaagatcagagtacttgatgagaatgacaac gcccctgtctttggacgtctttactacagcatagaagtgcctgaaaacttggaggcagtg cttctttttactcttagagccactgatcaggatgcaggagacagtggggagatgaactac agaattacagctggagacccctcaggagacttccacttggacggacaatcaggtgcacta tccacctcaaggccgctggatcgggagaagaaagcagtttatacactaatagtcacagcc caggaccaggggcaaccttctctcagtggcactgctacagtggaagtgaccattctggac ataaatgaccacagccctgagtttcagagcagcacctacactgcagatgtgtcagaagac gtacccataggctcactggttttggaggtgaaagccatcgatctggaccatggccccaac agccaggttcaatactttctgagccatggctcccagagcatgttcatcatagaccagaac acaggccgcataatcacagcagcacccctggacagagagagagttgcgtcttataccttt gaggtgtatgccactgactcctcccctgccaacccacgcaactccaccgctcacgtgact gtctacattcaggatgtaaacgacaacgctcccttcttcattctggacccatttattgtg aacatatctgcaagcagtgtgtcaagccgcagagtgctggccaccatgagagcagaggac aaagactttggggctaatggctctgtgttttatcgctttgctaaccctgtgagaggcttc accatcaattcactaaccggagacattcaggccacggagaagttgcagactctgacccaa agccagaggactttgatagtgcaggccatggaccagggcaacccagctcaatcctccctt ggggtggtaatcatttatatccgggaacagacctacagggggatacgcttctctcgcaca gctagagatgtcagtctgcaggagaatgctgctaaaggcacagttgtaacacagactcag gcccagtatcccgatggttcccaaactggtatcagctacagtcttttcagtggaaacaga atgcaatcttttggaataaacactattactggagaaatatgggtccagaaatctgaagga ctagactttgaggagaccccaaaactccgccttgtggtgaaagctgagacggcatcctcc agctcctacatggctgtcaacttaatccttcaagatgtcaatgacaatttgccacgcttc caactccagaactacgtagcgtacattagagaggcacaaggctacgattttcccattatc caggttgcagcagatgatctggatcagggacaaaatggtcaggtgacctattccattagg tcatcatccatgagtggcttgttcaagattgacccactgactggtagcatcaccactgca gccataatggacagagagatctggccgcaaaccaagcttgttgttacagcaacagaccgg ggaaccccacggctggctggctctgccaccctcactgtgatcatcatcgacctgaatgac aacagtcctacgattcctttgcctcgggagatccgagtgcctgaggacactctgatcggc acagttatcacccaggtaacaggaaatgatgtggactctgggccagctctctcctacaca ctacacctggatagaaacacagagggcatgtttgggattcatcgttatggaggtggcgtg tctcttactggcccactggactatgaagaaaggacatggtacactttgactattcgttcg tccgactctaaacatcaaagtgaagccaatctgactgtgctggtagatgatgtgaatgac aatgcccccaccttcacccaggacttctaccaggtgactgcatcagagcacctcccagca ggcagtgcagtcatcacagtgacagctactgaccgtgacactggggagaatgggaagatt acctacagagtgatgtcatcaaccagaggcgtcttttacattgacccaagcaatggtact ctgttcgtcaaccaaaagacagtgtttgattttgagaatccctccatccttgtagtaatt gaggctgtggaccatggcactccatccctttcatctattgcaactgtccaggttcaagtg tccgatgttaacgacaatgccccaatctttcaccaatcggagtacagggcgaccgtgtcc gaagatggacttcctggatccactgttctgaccttagaagctgtggatggggacctgtcc cgggataattgtggttttgactttgccattgccagtggtaactcaggtaatgccttccag attgagagcagtgtgcacttcttggaggggaggggcttccagacagttggcagtctgatc ctggtggaggagctggattttgaagcaatgccaagttataacctgactgttgtggtatca gatcgtgggatccctcagcgtagctccagcgtgcctatcctcatcagtgtcacagacgcc aacgacaaccctccagttttcagccgagcagagtacagtgtggtactgagtgagggtacg gcagcagggacagagatcttgcatctatctgccactgatccagactctgctcccaatgga gaggtgcagtactccataagctcaggggacgaaacagaccttttccaggtggaccggtgg acaggtgccttgaagctgcagcaacctttggacagtgagaggcagttgtcccatatgatt gttgtccaggctactgatggtcaaggacactatgccttggtcccagtcagtattgaggta aaggacatcaacgacaaccggcccttctttcccctcaagctagtaactgctagcatcaag gaaaaccaaccccagaatgccttagtcacaatgctgcatgcaatcgaccatgacaaaggg gtttttggacagttgaaatactacatgctagacaactctaaagatggaagagaggccttc cttattaatcaatcttcaggagaaattcggactcgctctacttttgattttgagaaagca aactccttccattttatggctgttgccatagatgctggcaactattctgctacagtcaca gtagaggtttatgttacaggagaggatgaatatgatcctgttttcacctcctcagagttc tcgtttgaagtgcctgaaggagcaaagaaaggtcagataattggcaaagtgcaagcaaaa gatgaggatgaaggcgtggatggcattgttctttactctctagcagacagttcaccttat tttgaagtcaataaatcaacaggtgagatttccttgaagatggacagctacagtagacat gtgggtcgcgctaaaagagaggtgcgtctaatgacactggatgtgactgcccacagccct cttgagacgtcccgcatggcaatggctaaggttaccgttgatgtgactcatacatttttc ggtctcaccacagacatgaatatgatgcttgttagcgtcattgcagtgtcacttgggaca atagtcatactgattataattgctgtggcactatgttttgttaaattaagacgccagaag aagcatcaaaaagcgcaaagacggacaccagcatcaggcaccatgctgcacaagattgag gaaacaaaaatagcagcaaatgaaattatttaccatcagacccttcctggatatgcagct gatcagagcactagtgggggtccgtacactcgtgggggatccctggatccctcacactcc agtggacgtgggtcagctgaggcagaggcagcagaggacgatgagatcagaatgataaat gaatatccccgtgtgtcaagtatttcctcctctatgcaggagcgcatctctgcccgaggt ccagactctggaatccagcaggatgcagatcagctatcagacgtgtcttgtgagccttcc atagattggttcaaagggaagaaactgggcagcctgaatgaaactatattggctggccag gtgccagtctacagggatgaggggggtggatatgtgggtgtgggacggggactcagcatc tcccaccctaaagactatactttcccagaggatggaaagcctgctgtagatggctctctg acagccattgtggccagtgatgaggagctgaggggcagctataactgggactacctgcta aactggtgtccccagttccaaccattagctaatgttttcactgaaattgcacgtttaaaa gatgaaacagctcctcctaatcctcgcaggtcatttcatcacaaagcaaaggctgagtca agaattgaccctccacctctcataacctcagtggcccaccccggcgccaaaactgtacct ccgaagcctgccgtagggaggactttccctcacctggcttctttacggagatctcccatt agtggcgagggatccatctcttcagttgccatgtctccaagtttctccccttccctctca ccactggcagcacgctctccagcgatcacacccttcagtgtttcacagggcccctctgca tccatgattagcacaactgaacatcatctggagcacagtgaggaagcagagctgagaatt taa

DBGET integrated database retrieval system