Scomber japonicus (chub mackerel): 128360121
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Entry
128360121 CDS
T09718
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128360121 (trpc4b)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128360121 (trpc4b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128360121
NCBI-ProteinID:
XP_053176436
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All DBs
Position
6:21223613..21241770
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AA seq
904 aa
AA seq
DB search
MSQLYYRKTGNSTYRDRIPLRIVRSESELSGLEKAYLGAVEKGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNVYVGDALLHAIRKEVVGAVELLLNHKK
PRGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQRGVSIPQPHAVRCNCFE
CASSSDVDGLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFQLSWELKELSTVENEFKSE
YEELSHICKQFAKDLLDQTRSSKELQIILNYRDDSNPLLDESTNDLARLKLAIKYCQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWFVKLITCIFIGLLFPLFSILYLVSPKNRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIASAHYELQGPAPTTVEWMILPWVLGFIWTEIKQ
MWDSGFEDYIDDWWNLMDFIMNSLYLATISLKIVAYAKYSGHKPRSSWEMWHPTLVAEAL
FAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETTGDGNCKGIRCSNQNNAFSTLFETLQSLFWSVFGLISLYVTNVKPDHVFTEFVGTTM
FGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNII
PSPKSVCYLIGWIKTHMLWRQSIKRLETFQTVGRRAAENVRQNHEYQEVLRNLVKRYVAA
KIRDAKTAEGLTEDNFKELKQDISSFRYEVLGMMKGKSQGGVVGTVASSTLAYPGNSFKY
SPKFSTDESQQKLNVFGVTTVLSGAAATNNPDCSTRLANTLVVPTSAEKNQNKLAQIVSE
AGFLQRQSRHLSQECDEIHSLSEDDTEKVKVEVVQKVEKDIQETDHSFTQQTKEAKNGKK
TYKN
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattacaggaaaactggaaactctacatacagggaccgcatccccctg
cggattgtgcggtctgagtctgagctctctggcctggagaaggcctacctgggggctgtt
gaaaagggggactatgcaagtgtgaaacaagccctggaggaggctgagatctactttagg
atcaatatcaactgcatcgaccccctgggacgcacagctctgctcatcgccattgaaaat
gagaacctggagattatcgagcttctgcttagctataatgtgtatgtgggtgatgccctg
ctacatgccattcgcaaagaagtggttggggccgtagagctgctgctcaatcacaagaaa
ccacgtggagaaaaacaggtcccaccgattctactggacaaacagttttcagatttcacc
ccagacatcactccaatcatccttgcagcccacaccaacaactatgagatcatcaaactg
cttgtgcagcgaggtgtctccatacctcagccacatgcagtgcgctgcaactgctttgag
tgtgcgtccagttcagatgtggatggcttgcgtcattcacgctctcgtctcaacatctac
aaggccctctccagcccatctctcattgccctctccagtgaggatccttttctcacagct
tttcagctcagctgggagctgaaggagctcagcacagtggagaatgagttcaagtcagaa
tatgaggagctgtcccacatttgtaagcaatttgcaaaagacctcttagaccagacccga
agctctaaagaattgcagataatccttaactaccgtgatgacagcaaccctctgctggat
gagagtactaatgatctggcccgattgaagctggctatcaaatattgtcagaaagagttt
gttgctcagcccaactgtcagcagcttctggcgtcacggtggtatgatgagttcccaggc
tggaggaggcgtcattggtttgtgaaactcatcacatgtatcttcattggcctcctcttt
ccactgttctccatcctctacttggtctctccaaagaaccgttacgggttattcattcgt
aagcccttcatcaagttcatctgtcatactgcttcctatctgaccttcctcttcctgctc
ctcctggcctcgcagcatatagccagtgcacattatgagcttcagggcccagcgcccacc
actgtggaatggatgatcctgccctgggttctcggtttcatatggacagagatcaaacag
atgtgggacagtggttttgaagactacatagatgactggtggaacttaatggacttcata
atgaactctttgtatcttgccaccatttccctgaagattgttgcctatgcaaagtacagc
gggcacaaacccagatcctcctgggaaatgtggcacccaactttggttgcagaggcattg
tttgccatcgctaacatcttcagctccttgcgcctcatctgtctgttcactgccaactcc
catctgggccccttacagatctcattgggtcgtatgctcctggacatcctcaagttcctc
tttatctactgtctagtgctgctagcctttgccaatggtctcaaccaactctacttttac
tatgaaacaacgggggatggtaattgcaagggtattcgctgcagtaaccaaaacaatgct
ttctcaacgctatttgagacactacagtcattattctggtctgtatttggcctgatttct
ctctacgtgaccaatgtaaagccagaccatgtattcactgagtttgtgggaactaccatg
tttggcacgtacaatgtcatctccctagtagttctactgaacatgctcattgcaatgatg
aacaactcctaccagcacattgctgatcatgcagatatagagtggaaatttgctagaaca
aaactatggatgagctactttgaagaagggggaactttgccatctccattcaatataatc
cccagtcccaagtcggtttgttatctcattggatggataaagactcatatgttatggaga
caaagcataaaaaggcttgaaaccttccaaactgtggggagacgtgcggccgaaaatgtt
aggcaaaaccatgagtatcaggaggttttaaggaacctagtgaagcggtatgtggccgca
aagattagagatgccaagacagcggaaggattgacagaagataatttcaaggagcttaag
caagatatctccagcttccgctatgaagtcctgggaatgatgaagggtaaatctcaaggt
ggggtagttggtacagttgcaagctcaaccttggcttaccccggaaactcgttcaagtac
tctcccaaattctctaccgatgagtcacaacagaagctgaacgtgtttggtgtgaccact
gtgctgagcggagctgcagccaccaacaaccctgattgctccaccaggctagccaatact
ctagttgtcccaaccagtgcagaaaagaatcaaaacaagctagcccaaattgtctcagaa
gctggattcctccagagacagagcagacatctctctcaggaatgtgatgaaatacactca
ttgtcagaggatgatactgagaaggtgaaagtggaagttgtacagaaagtagagaaggac
attcaggaaactgatcattcattcacacagcaaactaaagaagctaaaaatgggaaaaaa
acatataaaaattaa
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