KEGG   Scomber japonicus (chub mackerel): 128360163
Entry
128360163         CDS       T09718                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04210  Apoptosis
sjo04530  Tight junction
sjo04540  Gap junction
sjo04814  Motor proteins
sjo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128360163
  09143 Cell growth and death
   04210 Apoptosis
    128360163
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128360163
   04540 Gap junction
    128360163
  09142 Cell motility
   04814 Motor proteins
    128360163
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128360163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128360163
   03036 Chromosome and associated proteins [BR:sjo03036]
    128360163
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sjo04812]
    128360163
   04147 Exosome [BR:sjo04147]
    128360163
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128360163
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     128360163
Cytoskeleton proteins [BR:sjo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    128360163
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128360163
  Exosomal proteins of other body fluids (saliva and urine)
   128360163
  Exosomal proteins of colorectal cancer cells
   128360163
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 128360163
NCBI-ProteinID: XP_053176504
LinkDB
Position
6:complement(18312430..18315333)
AA seq 451 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctcagtgcacgttggtcaggctggcgtccaaattggaaacgcctgc
tgggagctttactgtctggaacatgggatccagccggatggacagatgcctagtgacaaa
acaattggaggaggggatgattccttcaacaccttcttcagtgagactggagccggaaag
cacgtccccagggctgtttttgtggacctggagcccacagtcattgatgaggtgcgtact
gggacctaccgccagctgttccaccctgagcagctgatcactggcaaagaggatgctgcc
aacaactacgctcgtggacactacaccatcggcaaagagatcattgacctggtgctggac
aggatccgcaaactggccgaccagtgcactggccttcagggcttcctggtcttccacagc
ttcggaggtggcaccggctcaggtttcacctccctgctgatggagcgtctgtctgttgac
tacggcaagaagtccaagcttgagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccttacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagataacgaggccatctacgatatctgccgtaggaacctcgatatcgag
cgtcctacctacactaacctgaacaggctgatcagtcagattgtttcctccatcactgct
tcccttcgtttcgatggtgctctcaatgttgatctgactgagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctacgcccccgtcatctcggcggagaag
gcgtaccacgagcagctaacggtgtctgagatcaccaacgcctgcttcgagccagccaat
cagatggtgaaatgcgaccctcgccacggcaagtacatggcttgctgccttctgtaccgt
ggtgatgtggttcccaaagatgtgaacgctgccattgccaccatcaaaaccaagcgctcc
atccaatttgtggactggtgtcccactggtttcaaggttggcatcaactaccagcctccc
actgtggttcctggtggagatctggctaaggtccagagggctgtgtgcatgctgagcaac
accactgccattgcagaggcctgggctcggctggatcacaagtttgatctgatgtatgct
aagcgtgcctttgttcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattatgaggaggttggagttgattctatt
gagggtgagggagaggaggaaggagaggaatattaa

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